PKNH_0730500 | proteasome subunit beta type-6, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0730500OTHER0.9992730.0007060.000021
No Results

  • Fasta :-

    >PKNH_0730500 MEVESMKAELMGAPLREDPYDIKTPISDGTTIIGIIYEHGVMLACDTRTSSGTLISNKCS RKINRINENIYACRSGASAHSQKVIELIKYFCLSMKCENRKKGRFHEDEVITDDLANEED IDINAINNPFGLAQNGDPNYVTKHKYFYEDKFMDFNPPVENVAHMTKKLLYANNNFLSCG LILGGYDKDKKQQLYSINLNGSIVQRFDYAVSGSGSVYIQSYLQDKYKKNMSKKECFELI LGCVKYAMYNDNSSGGIVRIVNITKLFVEEFTVTNTQLHFDY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0730500.fa Sequence name : PKNH_0730500 Sequence length : 282 VALUES OF COMPUTED PARAMETERS Coef20 : 3.147 CoefTot : 0.000 ChDiff : -3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.271 0.161 0.577 MesoH : -1.005 0.041 -0.409 0.098 MuHd_075 : 26.046 11.194 6.055 3.136 MuHd_095 : 10.260 8.848 2.839 2.593 MuHd_100 : 8.927 5.471 1.899 2.129 MuHd_105 : 6.046 1.788 1.172 1.404 Hmax_075 : 19.133 14.583 1.791 4.597 Hmax_095 : -2.800 5.775 -3.072 2.013 Hmax_100 : 4.600 4.700 -1.239 2.560 Hmax_105 : -6.800 5.017 -3.817 1.423 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9918 0.0082 DFMC : 0.9814 0.0186
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 282 PKNH_0730500 MEVESMKAELMGAPLREDPYDIKTPISDGTTIIGIIYEHGVMLACDTRTSSGTLISNKCSRKINRINENIYACRSGASAH 80 SQKVIELIKYFCLSMKCENRKKGRFHEDEVITDDLANEEDIDINAINNPFGLAQNGDPNYVTKHKYFYEDKFMDFNPPVE 160 NVAHMTKKLLYANNNFLSCGLILGGYDKDKKQQLYSINLNGSIVQRFDYAVSGSGSVYIQSYLQDKYKKNMSKKECFELI 240 LGCVKYAMYNDNSSGGIVRIVNITKLFVEEFTVTNTQLHFDY 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0730500 7 MEVESMK|AE 0.060 . PKNH_0730500 16 LMGAPLR|ED 0.074 . PKNH_0730500 23 EDPYDIK|TP 0.058 . PKNH_0730500 48 MLACDTR|TS 0.093 . PKNH_0730500 58 GTLISNK|CS 0.063 . PKNH_0730500 61 ISNKCSR|KI 0.117 . PKNH_0730500 62 SNKCSRK|IN 0.105 . PKNH_0730500 65 CSRKINR|IN 0.115 . PKNH_0730500 74 ENIYACR|SG 0.107 . PKNH_0730500 83 ASAHSQK|VI 0.071 . PKNH_0730500 89 KVIELIK|YF 0.062 . PKNH_0730500 96 YFCLSMK|CE 0.061 . PKNH_0730500 100 SMKCENR|KK 0.096 . PKNH_0730500 101 MKCENRK|KG 0.083 . PKNH_0730500 102 KCENRKK|GR 0.097 . PKNH_0730500 104 ENRKKGR|FH 0.181 . PKNH_0730500 143 DPNYVTK|HK 0.083 . PKNH_0730500 145 NYVTKHK|YF 0.068 . PKNH_0730500 151 KYFYEDK|FM 0.066 . PKNH_0730500 167 NVAHMTK|KL 0.063 . PKNH_0730500 168 VAHMTKK|LL 0.118 . PKNH_0730500 188 ILGGYDK|DK 0.077 . PKNH_0730500 190 GGYDKDK|KQ 0.059 . PKNH_0730500 191 GYDKDKK|QQ 0.073 . PKNH_0730500 206 NGSIVQR|FD 0.129 . PKNH_0730500 226 QSYLQDK|YK 0.064 . PKNH_0730500 228 YLQDKYK|KN 0.071 . PKNH_0730500 229 LQDKYKK|NM 0.130 . PKNH_0730500 233 YKKNMSK|KE 0.062 . PKNH_0730500 234 KKNMSKK|EC 0.136 . PKNH_0730500 245 LILGCVK|YA 0.063 . PKNH_0730500 259 SSGGIVR|IV 0.107 . PKNH_0730500 265 RIVNITK|LF 0.061 . ____________________________^_________________

  • Fasta :-

    >PKNH_0730500 ATGGAAGTCGAAAGCATGAAGGCAGAATTGATGGGAGCCCCACTGAGGGAAGACCCGTAC GACATCAAGACGCCCATTTCCGACGGCACGACCATCATAGGAATAATTTATGAGCATGGA GTCATGCTGGCGTGTGACACCAGGACATCTTCCGGAACACTCATTAGCAACAAGTGCTCT AGGAAGATAAACAGAATTAACGAAAACATATATGCCTGTCGTAGTGGAGCTTCTGCACAC AGTCAGAAGGTAATCGAACTGATTAAGTATTTTTGCTTATCCATGAAGTGTGAAAATAGA AAGAAAGGAAGGTTTCACGAGGACGAAGTTATTACGGATGACCTCGCGAATGAAGAAGAT ATCGACATCAATGCAATTAACAACCCATTCGGTTTAGCACAAAACGGGGATCCCAATTAT GTAACAAAGCATAAATACTTTTACGAAGATAAATTTATGGACTTCAATCCGCCAGTTGAA AATGTTGCCCACATGACAAAGAAGCTACTGTATGCGAACAACAATTTTCTCTCCTGTGGT CTTATCCTGGGAGGATACGACAAAGACAAGAAGCAACAACTGTACTCGATTAACCTAAAC GGAAGCATCGTCCAACGGTTCGATTACGCTGTTAGCGGAAGTGGTAGTGTGTACATACAG TCCTACTTGCAGGACAAGTACAAGAAAAATATGAGCAAAAAGGAGTGCTTTGAATTGATC CTGGGATGCGTCAAGTACGCCATGTACAACGACAACAGCAGCGGTGGCATCGTGCGAATC GTCAACATAACCAAGCTATTCGTGGAGGAGTTCACCGTCACGAACACACAGCTGCACTTT GATTACTAA
  • Download Fasta

  • Fasta :-

    MEVESMKAELMGAPLREDPYDIKTPISDGTTIIGIIYEHGVMLACDTRTSSGTLISNKCS RKINRINENIYACRSGASAHSQKVIELIKYFCLSMKCENRKKGRFHEDEVITDDLANEED IDINAINNPFGLAQNGDPNYVTKHKYFYEDKFMDFNPPVENVAHMTKKLLYANNNFLSCG LILGGYDKDKKQQLYSINLNGSIVQRFDYAVSGSGSVYIQSYLQDKYKKNMSKKECFELI LGCVKYAMYNDNSSGGIVRIVNITKLFVEEFTVTNTQLHFDY

  • title: active site
  • coordinates: T30,D46,R48,K62
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_073050081 SASAHSQKVI0.995unspPKNH_0730500232 SKKNMSKKEC0.996unsp

PK9_3040c      PKH_073010      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India