PKNH_0735000 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_0735000OTHER0.9999620.0000260.000011
No Results

  • Fasta :-

    >PKNH_0735000 MDECISHEEDNNIPTTTRVDGNPKLGAFFNKDGLLLRSYGWLVKNAIGIILLIHGLNSHA RLTFLRHNVHIVGNDKVILKDGNNYYVYKDSWIEHFNKNGYSVYALDLEGHGLSDGWRNL SLNINKFDDLVHDVIQYLNIINDDLCLEDSDNNSRAICDKAKECTTLCNYDNGSNNDKCK RNVRCNNKRKRGKASKGPNNPQSNGKSWSSKEHTNNKCSSRPIYILGQSMGGNIALRTLQ VLEKTQNNGRGRLNIQGCISLSSMICFQKIASPRSYKYKIFYLPFTRLIGSLFPTLRLAT KIGFQKYPYLNELKKYDKIGSKIGLTLKYWCELVKATSNLEKDMRYMPKDIPILFIHSKE DIFCLYRGVVSFFNRLDNDNKELISLDNMEHGLTTEPGNEMVLENIVNWIKKLKTKKQMA KSLKNK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0735000.fa Sequence name : PKNH_0735000 Sequence length : 426 VALUES OF COMPUTED PARAMETERS Coef20 : 3.170 CoefTot : 0.000 ChDiff : 19 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.124 1.559 0.141 0.664 MesoH : -0.671 0.196 -0.372 0.174 MuHd_075 : 24.119 13.320 7.272 3.517 MuHd_095 : 27.945 18.662 7.651 5.906 MuHd_100 : 16.634 12.534 4.457 4.277 MuHd_105 : 3.269 3.233 0.765 1.940 Hmax_075 : -1.283 2.217 -2.157 1.202 Hmax_095 : -2.100 1.925 -1.683 1.330 Hmax_100 : -2.100 0.500 -1.683 0.970 Hmax_105 : -13.183 -3.000 -4.736 0.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9579 0.0421 DFMC : 0.9681 0.0319
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 426 PKNH_0735000 MDECISHEEDNNIPTTTRVDGNPKLGAFFNKDGLLLRSYGWLVKNAIGIILLIHGLNSHARLTFLRHNVHIVGNDKVILK 80 DGNNYYVYKDSWIEHFNKNGYSVYALDLEGHGLSDGWRNLSLNINKFDDLVHDVIQYLNIINDDLCLEDSDNNSRAICDK 160 AKECTTLCNYDNGSNNDKCKRNVRCNNKRKRGKASKGPNNPQSNGKSWSSKEHTNNKCSSRPIYILGQSMGGNIALRTLQ 240 VLEKTQNNGRGRLNIQGCISLSSMICFQKIASPRSYKYKIFYLPFTRLIGSLFPTLRLATKIGFQKYPYLNELKKYDKIG 320 SKIGLTLKYWCELVKATSNLEKDMRYMPKDIPILFIHSKEDIFCLYRGVVSFFNRLDNDNKELISLDNMEHGLTTEPGNE 400 MVLENIVNWIKKLKTKKQMAKSLKNK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0735000 18 NIPTTTR|VD 0.071 . PKNH_0735000 24 RVDGNPK|LG 0.054 . PKNH_0735000 31 LGAFFNK|DG 0.069 . PKNH_0735000 37 KDGLLLR|SY 0.131 . PKNH_0735000 44 SYGWLVK|NA 0.066 . PKNH_0735000 61 GLNSHAR|LT 0.106 . PKNH_0735000 66 ARLTFLR|HN 0.093 . PKNH_0735000 76 HIVGNDK|VI 0.058 . PKNH_0735000 80 NDKVILK|DG 0.061 . PKNH_0735000 89 NNYYVYK|DS 0.084 . PKNH_0735000 98 WIEHFNK|NG 0.059 . PKNH_0735000 118 GLSDGWR|NL 0.114 . PKNH_0735000 126 LSLNINK|FD 0.065 . PKNH_0735000 155 DSDNNSR|AI 0.089 . PKNH_0735000 160 SRAICDK|AK 0.074 . PKNH_0735000 162 AICDKAK|EC 0.067 . PKNH_0735000 178 NGSNNDK|CK 0.068 . PKNH_0735000 180 SNNDKCK|RN 0.070 . PKNH_0735000 181 NNDKCKR|NV 0.226 . PKNH_0735000 184 KCKRNVR|CN 0.198 . PKNH_0735000 188 NVRCNNK|RK 0.056 . PKNH_0735000 189 VRCNNKR|KR 0.215 . PKNH_0735000 190 RCNNKRK|RG 0.084 . PKNH_0735000 191 CNNKRKR|GK 0.293 . PKNH_0735000 193 NKRKRGK|AS 0.069 . PKNH_0735000 196 KRGKASK|GP 0.068 . PKNH_0735000 206 NPQSNGK|SW 0.153 . PKNH_0735000 211 GKSWSSK|EH 0.081 . PKNH_0735000 217 KEHTNNK|CS 0.064 . PKNH_0735000 221 NNKCSSR|PI 0.117 . PKNH_0735000 237 GGNIALR|TL 0.101 . PKNH_0735000 244 TLQVLEK|TQ 0.066 . PKNH_0735000 250 KTQNNGR|GR 0.083 . PKNH_0735000 252 QNNGRGR|LN 0.113 . PKNH_0735000 269 SMICFQK|IA 0.068 . PKNH_0735000 274 QKIASPR|SY 0.163 . PKNH_0735000 277 ASPRSYK|YK 0.167 . PKNH_0735000 279 PRSYKYK|IF 0.083 . PKNH_0735000 287 FYLPFTR|LI 0.088 . PKNH_0735000 297 SLFPTLR|LA 0.124 . PKNH_0735000 301 TLRLATK|IG 0.074 . PKNH_0735000 306 TKIGFQK|YP 0.066 . PKNH_0735000 314 PYLNELK|KY 0.060 . PKNH_0735000 315 YLNELKK|YD 0.107 . PKNH_0735000 318 ELKKYDK|IG 0.069 . PKNH_0735000 322 YDKIGSK|IG 0.053 . PKNH_0735000 328 KIGLTLK|YW 0.065 . PKNH_0735000 335 YWCELVK|AT 0.075 . PKNH_0735000 342 ATSNLEK|DM 0.079 . PKNH_0735000 345 NLEKDMR|YM 0.092 . PKNH_0735000 349 DMRYMPK|DI 0.086 . PKNH_0735000 359 ILFIHSK|ED 0.063 . PKNH_0735000 367 DIFCLYR|GV 0.086 . PKNH_0735000 375 VVSFFNR|LD 0.091 . PKNH_0735000 381 RLDNDNK|EL 0.061 . PKNH_0735000 411 NIVNWIK|KL 0.060 . PKNH_0735000 412 IVNWIKK|LK 0.129 . PKNH_0735000 414 NWIKKLK|TK 0.066 . PKNH_0735000 416 IKKLKTK|KQ 0.064 . PKNH_0735000 417 KKLKTKK|QM 0.114 . PKNH_0735000 421 TKKQMAK|SL 0.105 . PKNH_0735000 424 QMAKSLK|NK 0.068 . PKNH_0735000 426 AKSLKNK|-- 0.086 . ____________________________^_________________

  • Fasta :-

    >PKNH_0735000 ATGGATGAGTGTATTTCCCATGAAGAAGATAACAACATCCCAACAACTACTAGAGTAGAC GGCAATCCCAAACTTGGTGCTTTCTTCAATAAGGATGGACTATTATTAAGATCATACGGG TGGTTAGTGAAAAACGCTATAGGTATTATACTACTAATTCATGGTCTAAATTCACATGCA AGATTGACCTTTTTAAGACATAACGTTCACATAGTAGGTAATGATAAAGTCATATTAAAA GACGGAAATAATTATTACGTTTATAAAGATAGCTGGATAGAACATTTTAATAAAAATGGA TATTCAGTGTATGCATTAGATTTAGAAGGTCATGGACTGTCCGACGGGTGGAGAAACCTA AGTCTGAATATTAACAAATTTGATGATTTAGTGCATGACGTAATACAATACCTTAATATA ATTAATGATGATTTATGCTTAGAGGATAGTGACAATAATTCGAGGGCAATTTGTGATAAG GCTAAGGAGTGTACTACTCTGTGTAATTATGACAATGGAAGTAATAATGATAAATGTAAA AGAAATGTGCGGTGTAATAATAAACGCAAAAGGGGCAAAGCTTCCAAGGGTCCTAATAAT CCTCAAAGTAATGGTAAATCCTGGTCTAGTAAAGAACATACGAATAATAAATGTTCTTCC CGTCCAATATACATACTTGGTCAATCAATGGGAGGAAATATTGCTTTAAGAACATTGCAA GTGTTAGAGAAGACACAAAACAATGGGAGAGGAAGATTAAACATTCAAGGTTGTATCTCA TTATCAAGTATGATTTGTTTTCAGAAAATAGCTTCACCACGTTCATATAAATATAAAATT TTTTATTTACCATTTACAAGATTAATTGGTAGCCTCTTTCCAACATTAAGACTTGCCACA AAAATAGGATTTCAAAAATACCCCTATCTAAATGAACTTAAGAAATATGATAAAATTGGC TCCAAAATTGGCTTAACCTTAAAATATTGGTGTGAACTTGTAAAAGCAACGAGTAACTTA GAGAAAGATATGCGATACATGCCTAAAGATATTCCTATATTGTTTATTCATTCCAAGGAA GATATTTTTTGTTTGTATAGAGGCGTAGTATCATTTTTTAATAGATTAGATAATGATAAT AAAGAATTGATTTCACTAGATAATATGGAGCACGGGTTAACCACGGAGCCTGGAAATGAA ATGGTCTTAGAAAACATCGTAAATTGGATTAAAAAATTAAAAACAAAAAAACAAATGGCC AAAAGTTTGAAAAATAAATAA
  • Download Fasta

  • Fasta :-

    MDECISHEEDNNIPTTTRVDGNPKLGAFFNKDGLLLRSYGWLVKNAIGIILLIHGLNSHA RLTFLRHNVHIVGNDKVILKDGNNYYVYKDSWIEHFNKNGYSVYALDLEGHGLSDGWRNL SLNINKFDDLVHDVIQYLNIINDDLCLEDSDNNSRAICDKAKECTTLCNYDNGSNNDKCK RNVRCNNKRKRGKASKGPNNPQSNGKSWSSKEHTNNKCSSRPIYILGQSMGGNIALRTLQ VLEKTQNNGRGRLNIQGCISLSSMICFQKIASPRSYKYKIFYLPFTRLIGSLFPTLRLAT KIGFQKYPYLNELKKYDKIGSKIGLTLKYWCELVKATSNLEKDMRYMPKDIPILFIHSKE DIFCLYRGVVSFFNRLDNDNKELISLDNMEHGLTTEPGNEMVLENIVNWIKKLKTKKQMA KSLKNK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0735000272 SQKIASPRSY0.992unspPKNH_0735000358 SLFIHSKEDI0.996unsp

PK9_3410w      PKH_073430      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India