PKNH_0804500 | peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0804500SP0.4186710.5672510.014077CS pos: 25-26. MFC-GA. Pr: 0.4944
No Results

  • Fasta :-

    >PKNH_0804500 MNAGKRFIINKCIFLLFSKISPMFCGAEKRKLQDEIVEHVKSSKLINYPVDKTCINLFHI SKEIDKLINARSVFLSRNDQNGSHSSLQNCLNLYYFLITCAKLKKITFFHRKVLEYVEDR IATSLQIAGVDRAHEKYIPYSIHIKNEKSVSHLVAELHTDCAAYLKKINSVKIRYLTIDR NQINIDEEWKQKHQCAFNKKKLKIPISKHNYEFILNAVTEPALRQKVLTLLNSPYEKKRS LNKEVIKILKKRYDVATKLGYRNWVDYSMSHFTSEKGKYEKLRDFFNVIKRKVDRDYDRV SVHMGKLLSSSGVGGNQPGDRYGAHDDRRELRRDRLSPIRDKPSMQEWSYYYNKSMNKSD EYFVNTFFPHGYVWKNFMEIVSRIYNFSYEEVQEKNVTKKWPKGSLVYKIERRGSVNHAS AANSQANGKLVRSPVGQNPRREVVSPGDTLLGYMYIVPYMEIKIRDYFRVPSMNCLSNTC LIFTGHVVLDYKFIGTLPIEKKLFSCSEILTLFHEFGHAYHLLLLSRKYGLYQFSNMPLD YAEFFSHMNEHLVNNFSVLQALSNKADNNSKINEDIFKSIKFDSSRLANIYTHAVIDYEI HNLNPHDFFTRHLDNPGEVPYDHSYDHACGDNSLVPFYNLLENYLPYKIGSSYSIHSTSF PYHFSCYYAGSVLSYLLAEMRVLMNMSTGDLSMKRNSSLVSFQKKFYGIVAQDFVGSSGW SGSSVIDRVLANRDLLA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0804500.fa Sequence name : PKNH_0804500 Sequence length : 737 VALUES OF COMPUTED PARAMETERS Coef20 : 4.486 CoefTot : -0.475 ChDiff : 28 ZoneTo : 27 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.129 1.406 0.148 0.575 MesoH : -0.045 0.538 -0.268 0.286 MuHd_075 : 39.485 22.768 12.013 8.846 MuHd_095 : 26.852 25.503 9.254 7.556 MuHd_100 : 21.504 21.141 6.542 6.619 MuHd_105 : 19.987 13.773 3.271 5.191 Hmax_075 : 17.800 18.100 4.750 6.320 Hmax_095 : 21.525 26.163 6.271 8.216 Hmax_100 : 22.900 24.800 5.905 8.340 Hmax_105 : 12.833 18.500 2.482 5.932 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0905 0.9095 DFMC : 0.2442 0.7558 This protein is probably imported in mitochondria. f(Ser) = 0.0741 f(Arg) = 0.0370 CMi = 0.60790 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 737 PKNH_0804500 MNAGKRFIINKCIFLLFSKISPMFCGAEKRKLQDEIVEHVKSSKLINYPVDKTCINLFHISKEIDKLINARSVFLSRNDQ 80 NGSHSSLQNCLNLYYFLITCAKLKKITFFHRKVLEYVEDRIATSLQIAGVDRAHEKYIPYSIHIKNEKSVSHLVAELHTD 160 CAAYLKKINSVKIRYLTIDRNQINIDEEWKQKHQCAFNKKKLKIPISKHNYEFILNAVTEPALRQKVLTLLNSPYEKKRS 240 LNKEVIKILKKRYDVATKLGYRNWVDYSMSHFTSEKGKYEKLRDFFNVIKRKVDRDYDRVSVHMGKLLSSSGVGGNQPGD 320 RYGAHDDRRELRRDRLSPIRDKPSMQEWSYYYNKSMNKSDEYFVNTFFPHGYVWKNFMEIVSRIYNFSYEEVQEKNVTKK 400 WPKGSLVYKIERRGSVNHASAANSQANGKLVRSPVGQNPRREVVSPGDTLLGYMYIVPYMEIKIRDYFRVPSMNCLSNTC 480 LIFTGHVVLDYKFIGTLPIEKKLFSCSEILTLFHEFGHAYHLLLLSRKYGLYQFSNMPLDYAEFFSHMNEHLVNNFSVLQ 560 ALSNKADNNSKINEDIFKSIKFDSSRLANIYTHAVIDYEIHNLNPHDFFTRHLDNPGEVPYDHSYDHACGDNSLVPFYNL 640 LENYLPYKIGSSYSIHSTSFPYHFSCYYAGSVLSYLLAEMRVLMNMSTGDLSMKRNSSLVSFQKKFYGIVAQDFVGSSGW 720 SGSSVIDRVLANRDLLA 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0804500 5 --MNAGK|RF 0.060 . PKNH_0804500 6 -MNAGKR|FI 0.197 . PKNH_0804500 11 KRFIINK|CI 0.069 . PKNH_0804500 19 IFLLFSK|IS 0.052 . PKNH_0804500 29 MFCGAEK|RK 0.057 . PKNH_0804500 30 FCGAEKR|KL 0.200 . PKNH_0804500 31 CGAEKRK|LQ 0.101 . PKNH_0804500 41 EIVEHVK|SS 0.067 . PKNH_0804500 44 EHVKSSK|LI 0.062 . PKNH_0804500 52 INYPVDK|TC 0.065 . PKNH_0804500 62 NLFHISK|EI 0.067 . PKNH_0804500 66 ISKEIDK|LI 0.059 . PKNH_0804500 71 DKLINAR|SV 0.186 . PKNH_0804500 77 RSVFLSR|ND 0.087 . PKNH_0804500 102 FLITCAK|LK 0.057 . PKNH_0804500 104 ITCAKLK|KI 0.062 . PKNH_0804500 105 TCAKLKK|IT 0.110 . PKNH_0804500 111 KITFFHR|KV 0.106 . PKNH_0804500 112 ITFFHRK|VL 0.109 . PKNH_0804500 120 LEYVEDR|IA 0.092 . PKNH_0804500 132 QIAGVDR|AH 0.117 . PKNH_0804500 136 VDRAHEK|YI 0.081 . PKNH_0804500 145 PYSIHIK|NE 0.061 . PKNH_0804500 148 IHIKNEK|SV 0.114 . PKNH_0804500 166 DCAAYLK|KI 0.060 . PKNH_0804500 167 CAAYLKK|IN 0.121 . PKNH_0804500 172 KKINSVK|IR 0.059 . PKNH_0804500 174 INSVKIR|YL 0.189 . PKNH_0804500 180 RYLTIDR|NQ 0.064 . PKNH_0804500 190 NIDEEWK|QK 0.064 . PKNH_0804500 192 DEEWKQK|HQ 0.063 . PKNH_0804500 199 HQCAFNK|KK 0.070 . PKNH_0804500 200 QCAFNKK|KL 0.091 . PKNH_0804500 201 CAFNKKK|LK 0.109 . PKNH_0804500 203 FNKKKLK|IP 0.064 . PKNH_0804500 208 LKIPISK|HN 0.065 . PKNH_0804500 224 VTEPALR|QK 0.062 . PKNH_0804500 226 EPALRQK|VL 0.060 . PKNH_0804500 237 LNSPYEK|KR 0.062 . PKNH_0804500 238 NSPYEKK|RS 0.083 . PKNH_0804500 239 SPYEKKR|SL 0.440 . PKNH_0804500 243 KKRSLNK|EV 0.090 . PKNH_0804500 247 LNKEVIK|IL 0.066 . PKNH_0804500 250 EVIKILK|KR 0.057 . PKNH_0804500 251 VIKILKK|RY 0.083 . PKNH_0804500 252 IKILKKR|YD 0.196 . PKNH_0804500 258 RYDVATK|LG 0.056 . PKNH_0804500 262 ATKLGYR|NW 0.071 . PKNH_0804500 276 SHFTSEK|GK 0.073 . PKNH_0804500 278 FTSEKGK|YE 0.070 . PKNH_0804500 281 EKGKYEK|LR 0.057 . PKNH_0804500 283 GKYEKLR|DF 0.184 . PKNH_0804500 290 DFFNVIK|RK 0.054 . PKNH_0804500 291 FFNVIKR|KV 0.280 . PKNH_0804500 292 FNVIKRK|VD 0.083 . PKNH_0804500 295 IKRKVDR|DY 0.184 . PKNH_0804500 299 VDRDYDR|VS 0.083 . PKNH_0804500 306 VSVHMGK|LL 0.072 . PKNH_0804500 321 GNQPGDR|YG 0.090 . PKNH_0804500 328 YGAHDDR|RE 0.065 . PKNH_0804500 329 GAHDDRR|EL 0.148 . PKNH_0804500 332 DDRRELR|RD 0.155 . PKNH_0804500 333 DRRELRR|DR 0.152 . PKNH_0804500 335 RELRRDR|LS 0.123 . PKNH_0804500 340 DRLSPIR|DK 0.094 . PKNH_0804500 342 LSPIRDK|PS 0.062 . PKNH_0804500 354 WSYYYNK|SM 0.085 . PKNH_0804500 358 YNKSMNK|SD 0.080 . PKNH_0804500 375 PHGYVWK|NF 0.069 . PKNH_0804500 383 FMEIVSR|IY 0.077 . PKNH_0804500 395 YEEVQEK|NV 0.077 . PKNH_0804500 399 QEKNVTK|KW 0.068 . PKNH_0804500 400 EKNVTKK|WP 0.133 . PKNH_0804500 403 VTKKWPK|GS 0.061 . PKNH_0804500 409 KGSLVYK|IE 0.071 . PKNH_0804500 412 LVYKIER|RG 0.075 . PKNH_0804500 413 VYKIERR|GS 0.108 . PKNH_0804500 429 NSQANGK|LV 0.074 . PKNH_0804500 432 ANGKLVR|SP 0.123 . PKNH_0804500 440 PVGQNPR|RE 0.071 . PKNH_0804500 441 VGQNPRR|EV 0.180 . PKNH_0804500 463 VPYMEIK|IR 0.060 . PKNH_0804500 465 YMEIKIR|DY 0.136 . PKNH_0804500 469 KIRDYFR|VP 0.084 . PKNH_0804500 492 HVVLDYK|FI 0.072 . PKNH_0804500 501 GTLPIEK|KL 0.055 . PKNH_0804500 502 TLPIEKK|LF 0.116 . PKNH_0804500 527 HLLLLSR|KY 0.089 . PKNH_0804500 528 LLLLSRK|YG 0.076 . PKNH_0804500 565 LQALSNK|AD 0.063 . PKNH_0804500 571 KADNNSK|IN 0.074 . PKNH_0804500 578 INEDIFK|SI 0.070 . PKNH_0804500 581 DIFKSIK|FD 0.066 . PKNH_0804500 586 IKFDSSR|LA 0.111 . PKNH_0804500 611 PHDFFTR|HL 0.092 . PKNH_0804500 648 ENYLPYK|IG 0.061 . PKNH_0804500 681 YLLAEMR|VL 0.071 . PKNH_0804500 694 TGDLSMK|RN 0.062 . PKNH_0804500 695 GDLSMKR|NS 0.145 . PKNH_0804500 704 SLVSFQK|KF 0.071 . PKNH_0804500 705 LVSFQKK|FY 0.237 . PKNH_0804500 728 GSSVIDR|VL 0.089 . PKNH_0804500 733 DRVLANR|DL 0.103 . ____________________________^_________________

  • Fasta :-

    >PKNH_0804500 ATGAACGCAGGAAAAAGGTTTATAATAAATAAATGCATTTTTCTCCTTTTTTCGAAAATA TCGCCCATGTTCTGTGGCGCGGAAAAAAGAAAACTGCAGGACGAAATTGTGGAGCATGTA AAGAGTTCCAAGCTCATCAACTATCCCGTAGACAAAACATGCATAAATTTATTTCACATA TCCAAAGAAATTGACAAGCTCATCAATGCGCGAAGTGTATTTCTATCAAGAAATGACCAG AACGGAAGTCACAGCAGTCTACAGAACTGCTTAAATTTGTATTACTTCCTAATCACATGT GCAAAGTTGAAGAAGATCACTTTTTTCCACAGGAAAGTTCTTGAATATGTGGAGGACAGA ATTGCCACAAGTCTACAAATCGCGGGGGTTGACAGGGCGCATGAAAAATACATTCCCTAT AGTATCCACATAAAAAATGAGAAATCGGTTAGCCACTTGGTGGCTGAACTGCATACAGAC TGCGCCGCGTATTTGAAGAAAATCAACAGTGTTAAGATAAGATACTTAACAATAGACAGG AACCAAATAAACATAGACGAAGAATGGAAACAGAAACACCAGTGTGCATTTAACAAGAAG AAGTTAAAAATACCGATAAGTAAGCACAACTATGAATTTATTCTAAACGCAGTAACAGAA CCGGCGTTGAGGCAAAAAGTGTTGACTCTTCTTAACAGCCCTTATGAGAAAAAAAGGAGC CTAAATAAAGAAGTAATAAAAATTTTGAAGAAGAGGTATGATGTGGCGACAAAGTTGGGT TATAGAAACTGGGTAGACTATTCCATGTCTCATTTCACAAGTGAGAAAGGCAAGTATGAA AAATTAAGGGATTTCTTTAATGTAATAAAAAGGAAGGTGGATAGGGATTATGATCGTGTG AGCGTTCACATGGGGAAGTTACTTAGTTCGTCAGGTGTAGGGGGTAATCAGCCGGGCGAT CGATATGGTGCACATGACGACAGACGCGAATTGCGACGTGATAGACTTTCTCCTATTCGT GATAAACCCTCCATGCAAGAGTGGAGCTATTACTATAACAAAAGTATGAACAAATCAGAC GAATATTTCGTGAATACCTTCTTCCCTCACGGGTATGTGTGGAAGAATTTCATGGAAATA GTTTCCCGTATTTACAATTTCTCCTATGAGGAAGTGCAGGAGAAAAATGTCACGAAGAAG TGGCCCAAGGGGAGTCTGGTCTATAAAATTGAGCGAAGGGGAAGTGTTAACCATGCCAGC GCTGCCAATTCACAGGCAAATGGAAAATTAGTACGGAGTCCAGTAGGACAGAATCCGAGA AGGGAAGTTGTCTCCCCCGGTGACACCCTCTTAGGCTATATGTATATAGTACCTTACATG GAAATAAAGATTAGGGATTATTTTAGAGTTCCCTCGATGAATTGTTTATCGAACACATGT CTAATATTCACAGGGCATGTAGTGCTGGATTATAAATTCATTGGAACATTACCAATAGAA AAGAAGCTGTTTAGTTGTTCAGAAATTCTAACCCTGTTTCATGAATTTGGACATGCGTAT CATTTGTTATTATTATCAAGGAAATATGGTTTATATCAGTTTTCAAACATGCCATTAGAT TATGCGGAATTTTTTTCTCACATGAATGAACACCTGGTGAATAACTTCAGTGTCTTACAA GCCTTATCAAATAAGGCAGATAATAATTCAAAAATAAATGAAGATATATTCAAGTCCATT AAATTTGACTCTTCTCGTTTGGCAAACATTTATACACATGCAGTGATAGATTACGAGATC CATAATTTAAACCCGCATGATTTCTTTACCCGCCATTTGGATAATCCTGGGGAAGTTCCA TATGACCATTCATATGATCATGCATGTGGGGATAATTCTTTGGTCCCTTTTTACAACCTC CTGGAAAATTATCTTCCGTATAAAATTGGATCCAGTTATTCCATACATTCCACAAGCTTT CCATATCATTTTTCATGTTATTATGCGGGCTCTGTTTTGAGTTACTTGTTAGCGGAAATG AGAGTCCTCATGAACATGTCGACGGGCGACTTGTCCATGAAGCGGAACAGTTCTCTGGTT TCTTTTCAGAAAAAGTTTTACGGCATTGTTGCGCAAGATTTTGTCGGATCTTCCGGTTGG TCTGGTTCCTCCGTCATCGACCGCGTGTTGGCCAACAGAGATTTGCTAGCCTGA
  • Download Fasta

  • Fasta :-

    MNAGKRFIINKCIFLLFSKISPMFCGAEKRKLQDEIVEHVKSSKLINYPVDKTCINLFHI SKEIDKLINARSVFLSRNDQNGSHSSLQNCLNLYYFLITCAKLKKITFFHRKVLEYVEDR IATSLQIAGVDRAHEKYIPYSIHIKNEKSVSHLVAELHTDCAAYLKKINSVKIRYLTIDR NQINIDEEWKQKHQCAFNKKKLKIPISKHNYEFILNAVTEPALRQKVLTLLNSPYEKKRS LNKEVIKILKKRYDVATKLGYRNWVDYSMSHFTSEKGKYEKLRDFFNVIKRKVDRDYDRV SVHMGKLLSSSGVGGNQPGDRYGAHDDRRELRRDRLSPIRDKPSMQEWSYYYNKSMNKSD EYFVNTFFPHGYVWKNFMEIVSRIYNFSYEEVQEKNVTKKWPKGSLVYKIERRGSVNHAS AANSQANGKLVRSPVGQNPRREVVSPGDTLLGYMYIVPYMEIKIRDYFRVPSMNCLSNTC LIFTGHVVLDYKFIGTLPIEKKLFSCSEILTLFHEFGHAYHLLLLSRKYGLYQFSNMPLD YAEFFSHMNEHLVNNFSVLQALSNKADNNSKINEDIFKSIKFDSSRLANIYTHAVIDYEI HNLNPHDFFTRHLDNPGEVPYDHSYDHACGDNSLVPFYNLLENYLPYKIGSSYSIHSTSF PYHFSCYYAGSVLSYLLAEMRVLMNMSTGDLSMKRNSSLVSFQKKFYGIVAQDFVGSSGW SGSSVIDRVLANRDLLA

  • title: Zn binding site
  • coordinates: H514,H518,E543
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0804500415 SERRGSVNHA0.996unspPKNH_0804500415 SERRGSVNHA0.996unspPKNH_0804500415 SERRGSVNHA0.996unspPKNH_0804500445 SREVVSPGDT0.998unspPKNH_0804500692 STGDLSMKRN0.996unspPKNH_0804500301 SYDRVSVHMG0.996unspPKNH_0804500337 SRDRLSPIRD0.998unsp

PK10_0380c      PKH_080440      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India