PKNH_0809200 | metalloprotease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0008237      

  • Curated_GO_Functions:  metallopeptidase activity      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0809200OTHER0.9999260.0000240.000050
No Results

  • Fasta :-

    >PKNH_0809200 MNVKNLDDVKYKFHKIKVLNENDKKAKAVLTRAADQVMPIMRKMRFSVELLSEFLPRSPN LLGLNIVAKSEIKIRIRKKRGGELFHFNDIMGTLLHELAHIVHSGHDRSFYELLDKLVLE YNKLYTFGKAGNQINGGKKTGGSDFRICNGSPKFMAAQAAEMRLLNNFMNKDGEILNMSL ESCLTPEQYNNLFKNRKERDDKICSISNDTIVIDCLMDSTNHDDGENAKTSQNTKNDFKS SNSLQTRNKNVFISSEDCIKEEKQTHVPEQDVYKKSLNIPGAKRNKRQAAFEQWSGDKVI TLPDNIGATPKNNGSDCVHIVKVKRDCSGMKHPENENDSTVSDNVGIRKGKKRKVIILD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0809200.fa Sequence name : PKNH_0809200 Sequence length : 359 VALUES OF COMPUTED PARAMETERS Coef20 : 3.388 CoefTot : -0.259 ChDiff : 13 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.341 0.929 -0.021 0.403 MesoH : -1.227 0.101 -0.616 0.088 MuHd_075 : 8.077 3.859 0.535 0.628 MuHd_095 : 18.704 9.877 3.279 3.254 MuHd_100 : 21.726 14.027 5.589 4.172 MuHd_105 : 25.920 19.628 8.241 5.358 Hmax_075 : -8.983 4.800 -4.898 1.700 Hmax_095 : -2.450 5.513 -3.582 2.083 Hmax_100 : -5.600 4.400 -4.230 1.740 Hmax_105 : 11.667 18.667 1.721 5.973 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9419 0.0581 DFMC : 0.9662 0.0338
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 359 PKNH_0809200 MNVKNLDDVKYKFHKIKVLNENDKKAKAVLTRAADQVMPIMRKMRFSVELLSEFLPRSPNLLGLNIVAKSEIKIRIRKKR 80 GGELFHFNDIMGTLLHELAHIVHSGHDRSFYELLDKLVLEYNKLYTFGKAGNQINGGKKTGGSDFRICNGSPKFMAAQAA 160 EMRLLNNFMNKDGEILNMSLESCLTPEQYNNLFKNRKERDDKICSISNDTIVIDCLMDSTNHDDGENAKTSQNTKNDFKS 240 SNSLQTRNKNVFISSEDCIKEEKQTHVPEQDVYKKSLNIPGAKRNKRQAAFEQWSGDKVITLPDNIGATPKNNGSDCVHI 320 VKVKRDCSGMKHPENENDSTVSDNVGIRKGKKRKVIILD 400 ...............................................................................P 80 ................................................................................ 160 ................................................................................ 240 ..............................................P................................. 320 ....................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ PKNH_0809200 4 ---MNVK|NL 0.064 . PKNH_0809200 10 KNLDDVK|YK 0.067 . PKNH_0809200 12 LDDVKYK|FH 0.072 . PKNH_0809200 15 VKYKFHK|IK 0.065 . PKNH_0809200 17 YKFHKIK|VL 0.071 . PKNH_0809200 24 VLNENDK|KA 0.076 . PKNH_0809200 25 LNENDKK|AK 0.081 . PKNH_0809200 27 ENDKKAK|AV 0.081 . PKNH_0809200 32 AKAVLTR|AA 0.209 . PKNH_0809200 42 QVMPIMR|KM 0.085 . PKNH_0809200 43 VMPIMRK|MR 0.074 . PKNH_0809200 45 PIMRKMR|FS 0.385 . PKNH_0809200 57 LSEFLPR|SP 0.115 . PKNH_0809200 69 GLNIVAK|SE 0.105 . PKNH_0809200 73 VAKSEIK|IR 0.057 . PKNH_0809200 75 KSEIKIR|IR 0.093 . PKNH_0809200 77 EIKIRIR|KK 0.092 . PKNH_0809200 78 IKIRIRK|KR 0.311 . PKNH_0809200 79 KIRIRKK|RG 0.116 . PKNH_0809200 80 IRIRKKR|GG 0.708 *ProP* PKNH_0809200 108 VHSGHDR|SF 0.168 . PKNH_0809200 116 FYELLDK|LV 0.060 . PKNH_0809200 123 LVLEYNK|LY 0.054 . PKNH_0809200 129 KLYTFGK|AG 0.077 . PKNH_0809200 138 NQINGGK|KT 0.071 . PKNH_0809200 139 QINGGKK|TG 0.095 . PKNH_0809200 146 TGGSDFR|IC 0.095 . PKNH_0809200 153 ICNGSPK|FM 0.080 . PKNH_0809200 163 AQAAEMR|LL 0.080 . PKNH_0809200 171 LNNFMNK|DG 0.086 . PKNH_0809200 194 QYNNLFK|NR 0.059 . PKNH_0809200 196 NNLFKNR|KE 0.088 . PKNH_0809200 197 NLFKNRK|ER 0.090 . PKNH_0809200 199 FKNRKER|DD 0.363 . PKNH_0809200 202 RKERDDK|IC 0.176 . PKNH_0809200 229 DDGENAK|TS 0.062 . PKNH_0809200 235 KTSQNTK|ND 0.067 . PKNH_0809200 239 NTKNDFK|SS 0.071 . PKNH_0809200 247 SNSLQTR|NK 0.113 . PKNH_0809200 249 SLQTRNK|NV 0.080 . PKNH_0809200 260 SSEDCIK|EE 0.056 . PKNH_0809200 263 DCIKEEK|QT 0.064 . PKNH_0809200 274 PEQDVYK|KS 0.064 . PKNH_0809200 275 EQDVYKK|SL 0.119 . PKNH_0809200 283 LNIPGAK|RN 0.059 . PKNH_0809200 284 NIPGAKR|NK 0.137 . PKNH_0809200 286 PGAKRNK|RQ 0.065 . PKNH_0809200 287 GAKRNKR|QA 0.664 *ProP* PKNH_0809200 298 EQWSGDK|VI 0.054 . PKNH_0809200 311 NIGATPK|NN 0.069 . PKNH_0809200 322 DCVHIVK|VK 0.059 . PKNH_0809200 324 VHIVKVK|RD 0.065 . PKNH_0809200 325 HIVKVKR|DC 0.298 . PKNH_0809200 331 RDCSGMK|HP 0.070 . PKNH_0809200 348 SDNVGIR|KG 0.078 . PKNH_0809200 349 DNVGIRK|GK 0.078 . PKNH_0809200 351 VGIRKGK|KR 0.117 . PKNH_0809200 352 GIRKGKK|RK 0.096 . PKNH_0809200 353 IRKGKKR|KV 0.365 . PKNH_0809200 354 RKGKKRK|VI 0.094 . ____________________________^_________________

  • Fasta :-

    >PKNH_0809200 ATGAACGTTAAAAACTTAGATGATGTAAAATACAAATTTCATAAAATTAAAGTTTTAAAC GAAAATGATAAAAAGGCAAAAGCGGTGTTGACCCGGGCAGCCGACCAGGTCATGCCAATT ATGAGGAAGATGCGCTTTTCGGTTGAGTTATTGTCTGAATTTTTACCCCGGAGTCCTAAT CTGCTAGGGCTAAACATTGTGGCTAAATCAGAAATTAAGATAAGGATTCGGAAAAAAAGA GGAGGAGAGTTATTTCACTTCAACGATATCATGGGGACGCTGCTGCACGAACTAGCGCAC ATTGTGCACAGCGGCCATGACAGATCCTTTTACGAACTCTTAGACAAACTAGTGTTAGAG TATAATAAATTATACACTTTTGGGAAAGCAGGAAATCAAATCAATGGAGGGAAAAAAACA GGAGGAAGTGATTTCCGTATATGTAATGGTAGCCCCAAATTTATGGCAGCACAGGCTGCT GAAATGAGACTACTAAATAATTTTATGAACAAGGATGGGGAAATATTAAATATGTCCCTT GAAAGTTGCTTAACACCAGAGCAGTATAATAATTTATTTAAAAATCGAAAAGAACGTGAT GATAAAATTTGTTCCATTTCGAATGATACAATTGTGATAGACTGCTTGATGGATTCGACA AACCATGATGATGGGGAAAATGCGAAAACTTCACAGAACACAAAAAATGATTTTAAATCA TCAAATTCGTTGCAAACAAGGAATAAGAATGTCTTCATTTCGAGTGAGGATTGTATAAAG GAGGAGAAACAGACACATGTACCAGAGCAGGATGTGTATAAGAAATCATTGAACATACCA GGAGCTAAGCGAAATAAGAGACAAGCAGCTTTTGAACAGTGGAGTGGAGACAAAGTTATA ACATTACCCGATAACATAGGAGCCACACCTAAAAACAACGGCAGCGACTGCGTGCACATT GTAAAGGTCAAACGAGATTGCAGCGGTATGAAACATCCTGAAAACGAAAATGACTCGACC GTTTCGGATAATGTGGGTATCAGGAAGGGCAAAAAAAGAAAAGTTATAATTCTCGATTAG
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  • Fasta :-

    MNVKNLDDVKYKFHKIKVLNENDKKAKAVLTRAADQVMPIMRKMRFSVELLSEFLPRSPN LLGLNIVAKSEIKIRIRKKRGGELFHFNDIMGTLLHELAHIVHSGHDRSFYELLDKLVLE YNKLYTFGKAGNQINGGKKTGGSDFRICNGSPKFMAAQAAEMRLLNNFMNKDGEILNMSL ESCLTPEQYNNLFKNRKERDDKICSISNDTIVIDCLMDSTNHDDGENAKTSQNTKNDFKS SNSLQTRNKNVFISSEDCIKEEKQTHVPEQDVYKKSLNIPGAKRNKRQAAFEQWSGDKVI TLPDNIGATPKNNGSDCVHIVKVKRDCSGMKHPENENDSTVSDNVGIRKGKKRKVIILD

    No Results
  • title: Zn binding site
  • coordinates: H96,H100,H106
No Results
No Results
IDSitePeptideScoreMethod
PKNH_080920047 SKMRFSVELL0.993unsp

PK10_0800c      PKH_080890      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India