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Computed_GO_Function_IDs: GO:0008233
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Computed_GO_Process_IDs: GO:0006465
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Curated_GO_Function_IDs:
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Curated_GO_Functions:
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No Results
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Fasta :-
>PKNH_0820100
MPKAQVDDDNRGSTYLVTNLYSEQELKKVAQDYISEKIRDQNFSENIQYSNIRIFLSLLL
ISIGSYCTIFVQYKKEPLLMIKLLIAFFIVSTILFFWEIVFFEDIFMILRTNNGGVVKLF
FELDIQKSALVLTYKMNKQKHSTSFELRKLFNEDGFLVQNYADAMLKQFISNHGKIFKLC
DNKKKA
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MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0820100.fa
Sequence name : PKNH_0820100
Sequence length : 186
VALUES OF COMPUTED PARAMETERS
Coef20 : 3.433
CoefTot : -0.380
ChDiff : 4
ZoneTo : 6
KR : 1
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.153 2.653 0.492 0.904
MesoH : 0.491 1.332 -0.093 0.510
MuHd_075 : 8.391 8.150 1.751 1.687
MuHd_095 : 23.170 12.486 5.167 5.002
MuHd_100 : 17.458 9.781 4.100 4.274
MuHd_105 : 10.006 7.977 2.515 2.956
Hmax_075 : -2.800 3.587 -2.749 0.998
Hmax_095 : -1.312 4.112 -2.175 1.864
Hmax_100 : -4.900 2.800 -2.622 1.560
Hmax_105 : -2.800 4.667 -1.597 2.007
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.9482 0.0518
DFMC : 0.9725 0.0275
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##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
186 PKNH_0820100
MPKAQVDDDNRGSTYLVTNLYSEQELKKVAQDYISEKIRDQNFSENIQYSNIRIFLSLLLISIGSYCTIFVQYKKEPLLM 80
IKLLIAFFIVSTILFFWEIVFFEDIFMILRTNNGGVVKLFFELDIQKSALVLTYKMNKQKHSTSFELRKLFNEDGFLVQN 160
YADAMLKQFISNHGKIFKLCDNKKKA 240
................................................................................ 80
................................................................................ 160
.......................... 240
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PKNH_0820100 3 ----MPK|AQ 0.061 .
PKNH_0820100 11 QVDDDNR|GS 0.072 .
PKNH_0820100 27 YSEQELK|KV 0.069 .
PKNH_0820100 28 SEQELKK|VA 0.116 .
PKNH_0820100 37 QDYISEK|IR 0.066 .
PKNH_0820100 39 YISEKIR|DQ 0.146 .
PKNH_0820100 53 IQYSNIR|IF 0.076 .
PKNH_0820100 74 TIFVQYK|KE 0.056 .
PKNH_0820100 75 IFVQYKK|EP 0.068 .
PKNH_0820100 82 EPLLMIK|LL 0.060 .
PKNH_0820100 110 DIFMILR|TN 0.071 .
PKNH_0820100 118 NNGGVVK|LF 0.064 .
PKNH_0820100 127 FELDIQK|SA 0.064 .
PKNH_0820100 135 ALVLTYK|MN 0.068 .
PKNH_0820100 138 LTYKMNK|QK 0.059 .
PKNH_0820100 140 YKMNKQK|HS 0.072 .
PKNH_0820100 148 STSFELR|KL 0.108 .
PKNH_0820100 149 TSFELRK|LF 0.084 .
PKNH_0820100 167 YADAMLK|QF 0.056 .
PKNH_0820100 175 FISNHGK|IF 0.065 .
PKNH_0820100 178 NHGKIFK|LC 0.065 .
PKNH_0820100 183 FKLCDNK|KK 0.055 .
PKNH_0820100 184 KLCDNKK|KA 0.115 .
PKNH_0820100 185 LCDNKKK|A- 0.116 .
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Fasta :-
>PKNH_0820100
ATGCCGAAAGCCCAAGTGGACGATGATAATAGGGGTAGCACATACCTCGTCACCAACCTG
TACAGCGAACAAGAGCTGAAAAAAGTTGCGCAGGACTACATAAGCGAAAAAATAAGGGAC
CAAAATTTTTCAGAGAATATCCAGTACTCTAACATTCGAATTTTTCTAAGTTTGCTTCTC
ATATCGATTGGATCCTACTGCACCATCTTCGTGCAGTACAAAAAGGAACCGTTGCTTATG
ATAAAATTGCTCATCGCCTTCTTCATCGTCTCGACAATTCTCTTCTTTTGGGAGATTGTC
TTTTTCGAAGACATCTTCATGATTTTGAGGACCAACAATGGCGGAGTTGTGAAGCTGTTC
TTCGAGCTGGACATCCAGAAGAGCGCCCTCGTATTAACCTACAAGATGAATAAACAAAAG
CATAGCACATCGTTTGAGCTTCGCAAGCTGTTCAACGAAGATGGATTCCTCGTCCAGAAT
TACGCAGACGCCATGTTGAAGCAGTTCATTTCAAATCACGGGAAGATTTTCAAACTCTGT
GATAATAAGAAAAAGGCCTGA
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