PKNH_0830700 | plasmepsin VI, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0830700SP0.0130970.9864640.000439CS pos: 24-25. FLC-LP. Pr: 0.6539
No Results

  • Fasta :-

    >PKNH_0830700 MGLVFLLAPLFILFVALLPSPFLCLPPLSALKSGGGKKNLSNSPTLGHTSKKPLLLSEIK LKNRFRNDVKGFIRNVKSFHDIIEHKTPNSLLYVQEDLLNFHNSQFIGDIEIGTPPQNFK VVFDTGSSNFAVPSTKCVKGGCVPHKKFNPDKSSTYTRQLKGNKESIYTYIQYGTGTSIL EHGYDDVNLKGLRIKHQSVGLAIEESLHPFSELPFDGIVGLGFSDPDFSSKKGYGMSLIE TIKKQNLLKRNIFSFYVPKKLQEPGSITFGSANRKYALEGRQIEWFPVISIYFWEINLVD VQLSDQNLKICENRKCRAAIDTGSSLLTGPSSLMQPLIENLYLQKDCSNKSSLPNISFIL KNVEGKDVKFDFTPDDYILEETDEEDNSVQCVIGIMSMDVPAPRGPIFVFGNVFIRKYYS IFDNDHKLVGLIEARHDW
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0830700.fa Sequence name : PKNH_0830700 Sequence length : 438 VALUES OF COMPUTED PARAMETERS Coef20 : 4.471 CoefTot : -0.934 ChDiff : 3 ZoneTo : 57 KR : 5 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.565 2.912 0.488 0.985 MesoH : -0.387 0.425 -0.369 0.217 MuHd_075 : 35.980 22.488 11.505 7.017 MuHd_095 : 13.060 11.722 4.945 3.674 MuHd_100 : 23.393 15.832 8.215 5.377 MuHd_105 : 25.798 16.443 9.239 5.645 Hmax_075 : 12.600 12.900 1.806 4.069 Hmax_095 : -4.550 24.325 -3.816 7.962 Hmax_100 : 5.800 5.900 -0.197 2.640 Hmax_105 : -3.000 7.800 1.549 3.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9710 0.0290 DFMC : 0.9228 0.0772
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 438 PKNH_0830700 MGLVFLLAPLFILFVALLPSPFLCLPPLSALKSGGGKKNLSNSPTLGHTSKKPLLLSEIKLKNRFRNDVKGFIRNVKSFH 80 DIIEHKTPNSLLYVQEDLLNFHNSQFIGDIEIGTPPQNFKVVFDTGSSNFAVPSTKCVKGGCVPHKKFNPDKSSTYTRQL 160 KGNKESIYTYIQYGTGTSILEHGYDDVNLKGLRIKHQSVGLAIEESLHPFSELPFDGIVGLGFSDPDFSSKKGYGMSLIE 240 TIKKQNLLKRNIFSFYVPKKLQEPGSITFGSANRKYALEGRQIEWFPVISIYFWEINLVDVQLSDQNLKICENRKCRAAI 320 DTGSSLLTGPSSLMQPLIENLYLQKDCSNKSSLPNISFILKNVEGKDVKFDFTPDDYILEETDEEDNSVQCVIGIMSMDV 400 PAPRGPIFVFGNVFIRKYYSIFDNDHKLVGLIEARHDW 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0830700 32 PPLSALK|SG 0.072 . PKNH_0830700 37 LKSGGGK|KN 0.062 . PKNH_0830700 38 KSGGGKK|NL 0.122 . PKNH_0830700 51 TLGHTSK|KP 0.056 . PKNH_0830700 52 LGHTSKK|PL 0.108 . PKNH_0830700 60 LLLSEIK|LK 0.057 . PKNH_0830700 62 LSEIKLK|NR 0.060 . PKNH_0830700 64 EIKLKNR|FR 0.095 . PKNH_0830700 66 KLKNRFR|ND 0.102 . PKNH_0830700 70 RFRNDVK|GF 0.069 . PKNH_0830700 74 DVKGFIR|NV 0.092 . PKNH_0830700 77 GFIRNVK|SF 0.277 . PKNH_0830700 86 HDIIEHK|TP 0.060 . PKNH_0830700 120 TPPQNFK|VV 0.090 . PKNH_0830700 136 FAVPSTK|CV 0.075 . PKNH_0830700 139 PSTKCVK|GG 0.057 . PKNH_0830700 146 GGCVPHK|KF 0.071 . PKNH_0830700 147 GCVPHKK|FN 0.123 . PKNH_0830700 152 KKFNPDK|SS 0.085 . PKNH_0830700 158 KSSTYTR|QL 0.135 . PKNH_0830700 161 TYTRQLK|GN 0.137 . PKNH_0830700 164 RQLKGNK|ES 0.055 . PKNH_0830700 190 YDDVNLK|GL 0.066 . PKNH_0830700 193 VNLKGLR|IK 0.080 . PKNH_0830700 195 LKGLRIK|HQ 0.084 . PKNH_0830700 231 DPDFSSK|KG 0.059 . PKNH_0830700 232 PDFSSKK|GY 0.134 . PKNH_0830700 243 SLIETIK|KQ 0.057 . PKNH_0830700 244 LIETIKK|QN 0.085 . PKNH_0830700 249 KKQNLLK|RN 0.061 . PKNH_0830700 250 KQNLLKR|NI 0.181 . PKNH_0830700 259 FSFYVPK|KL 0.065 . PKNH_0830700 260 SFYVPKK|LQ 0.122 . PKNH_0830700 274 TFGSANR|KY 0.082 . PKNH_0830700 275 FGSANRK|YA 0.122 . PKNH_0830700 281 KYALEGR|QI 0.104 . PKNH_0830700 309 LSDQNLK|IC 0.056 . PKNH_0830700 314 LKICENR|KC 0.115 . PKNH_0830700 315 KICENRK|CR 0.078 . PKNH_0830700 317 CENRKCR|AA 0.490 . PKNH_0830700 345 ENLYLQK|DC 0.062 . PKNH_0830700 350 QKDCSNK|SS 0.076 . PKNH_0830700 361 NISFILK|NV 0.082 . PKNH_0830700 366 LKNVEGK|DV 0.095 . PKNH_0830700 369 VEGKDVK|FD 0.062 . PKNH_0830700 404 MDVPAPR|GP 0.095 . PKNH_0830700 416 FGNVFIR|KY 0.094 . PKNH_0830700 417 GNVFIRK|YY 0.107 . PKNH_0830700 427 IFDNDHK|LV 0.076 . PKNH_0830700 435 VGLIEAR|HD 0.081 . ____________________________^_________________

  • Fasta :-

    >PKNH_0830700 ATGGGGCTAGTATTTCTTCTTGCCCCCCTGTTCATCCTCTTCGTGGCTTTGTTGCCTTCC CCATTTTTGTGTTTACCTCCATTAAGCGCCCTTAAAAGTGGCGGAGGGAAAAAGAACTTA AGTAACTCCCCCACCCTGGGGCATACCAGCAAGAAGCCCCTTCTGCTCAGCGAAATAAAA TTGAAAAACCGATTTAGAAATGACGTAAAGGGGTTCATACGAAACGTGAAATCCTTTCAC GACATTATAGAGCACAAGACTCCAAACTCGTTGTTGTACGTGCAGGAGGACTTACTCAAT TTTCACAACAGCCAGTTTATTGGGGACATAGAGATCGGCACGCCTCCACAAAATTTTAAA GTCGTGTTCGACACAGGGTCCAGCAACTTCGCCGTGCCCTCGACGAAATGTGTCAAAGGA GGTTGTGTGCCTCACAAGAAATTCAACCCCGACAAGTCCAGTACCTACACTCGGCAGTTA AAAGGCAATAAGGAGTCCATTTACACGTACATACAGTACGGCACAGGAACGAGCATTCTT GAGCACGGATATGACGACGTCAATTTAAAGGGACTGAGGATCAAACATCAGAGCGTTGGC CTAGCCATAGAAGAATCTTTACACCCCTTTTCGGAATTGCCTTTCGATGGGATTGTTGGC CTGGGATTTTCAGACCCGGACTTTAGCTCTAAAAAAGGATACGGGATGTCCTTAATAGAG ACGATAAAAAAGCAGAACCTGCTGAAAAGGAACATTTTCTCTTTTTACGTGCCAAAGAAG TTACAGGAGCCCGGCTCCATTACGTTCGGAAGTGCAAACAGAAAATACGCCCTCGAAGGA AGACAAATTGAGTGGTTTCCCGTCATATCGATTTATTTCTGGGAAATTAACCTGGTAGAC GTACAACTCTCCGACCAGAATTTAAAGATATGCGAAAATAGGAAATGTCGAGCGGCCATT GACACTGGGTCCAGTTTGCTAACCGGCCCATCAAGCCTGATGCAACCGCTGATAGAAAAT CTGTACTTGCAGAAGGACTGCTCAAATAAGAGCAGCTTGCCAAATATTTCTTTTATTTTA AAAAATGTCGAAGGGAAGGATGTGAAGTTCGATTTTACACCGGACGACTATATCCTGGAG GAAACTGACGAGGAGGATAATTCTGTTCAGTGCGTGATCGGAATAATGTCGATGGATGTC CCCGCGCCTCGCGGGCCCATCTTTGTCTTCGGTAACGTTTTCATAAGAAAGTACTACTCG ATATTTGATAATGACCATAAGCTCGTGGGCCTCATTGAAGCTCGGCACGACTGGTAA
  • Download Fasta

  • Fasta :-

    MGLVFLLAPLFILFVALLPSPFLCLPPLSALKSGGGKKNLSNSPTLGHTSKKPLLLSEIK LKNRFRNDVKGFIRNVKSFHDIIEHKTPNSLLYVQEDLLNFHNSQFIGDIEIGTPPQNFK VVFDTGSSNFAVPSTKCVKGGCVPHKKFNPDKSSTYTRQLKGNKESIYTYIQYGTGTSIL EHGYDDVNLKGLRIKHQSVGLAIEESLHPFSELPFDGIVGLGFSDPDFSSKKGYGMSLIE TIKKQNLLKRNIFSFYVPKKLQEPGSITFGSANRKYALEGRQIEWFPVISIYFWEINLVD VQLSDQNLKICENRKCRAAIDTGSSLLTGPSSLMQPLIENLYLQKDCSNKSSLPNISFIL KNVEGKDVKFDFTPDDYILEETDEEDNSVQCVIGIMSMDVPAPRGPIFVFGNVFIRKYYS IFDNDHKLVGLIEARHDW

  • title: inhibitor binding site
  • coordinates: D124,G126,S128,K164,I171,Q172,I218
No Results
No Results
IDSitePeptideScoreMethod
PKNH_0830700420 SRKYYSIFDN0.995unsp

PK3_0910w      PKH_082830      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India