PKNH_0909600 | Josephin domain-containing protein, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0909600OTHER0.9999510.0000410.000009
No Results

  • Fasta :-

    >PKNH_0909600 MCHYETHAIETERGLINVYFERQSKLYCLLHTANNILQAHVYSPDDFKDAEIILHNASVG LSTLSGDQADDSEGDHADQNSKNCYVPDGDGNRGSSQLTRVREKESLKYNNVFTYIKRGF HYFGNFNINILYFFMNKHNIDLQWIDNKQILRKINNIKDNTCATLFDSDQLNDKKLIAFV VNIVRINLFDFYQHRHFYTIRKISGMWFQLDSTLSKPVMLPTNEDLNNHLFNTVKDNKFN KSDNYIIQVFKRENNHDK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0909600.fa Sequence name : PKNH_0909600 Sequence length : 258 VALUES OF COMPUTED PARAMETERS Coef20 : 3.468 CoefTot : -0.396 ChDiff : -2 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.829 1.624 -0.091 0.546 MesoH : -1.235 -0.026 -0.622 0.090 MuHd_075 : 15.281 8.618 4.438 3.231 MuHd_095 : 17.740 8.176 2.220 3.695 MuHd_100 : 21.301 16.127 5.487 5.148 MuHd_105 : 23.109 20.597 7.890 5.690 Hmax_075 : -4.462 5.017 -1.185 2.497 Hmax_095 : 3.200 6.500 -0.914 3.230 Hmax_100 : 7.900 9.500 -0.733 3.680 Hmax_105 : 7.787 10.100 -0.246 3.330 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9854 0.0146 DFMC : 0.9808 0.0192
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 258 PKNH_0909600 MCHYETHAIETERGLINVYFERQSKLYCLLHTANNILQAHVYSPDDFKDAEIILHNASVGLSTLSGDQADDSEGDHADQN 80 SKNCYVPDGDGNRGSSQLTRVREKESLKYNNVFTYIKRGFHYFGNFNINILYFFMNKHNIDLQWIDNKQILRKINNIKDN 160 TCATLFDSDQLNDKKLIAFVVNIVRINLFDFYQHRHFYTIRKISGMWFQLDSTLSKPVMLPTNEDLNNHLFNTVKDNKFN 240 KSDNYIIQVFKRENNHDK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0909600 13 HAIETER|GL 0.100 . PKNH_0909600 22 INVYFER|QS 0.073 . PKNH_0909600 25 YFERQSK|LY 0.084 . PKNH_0909600 48 YSPDDFK|DA 0.098 . PKNH_0909600 82 HADQNSK|NC 0.054 . PKNH_0909600 93 PDGDGNR|GS 0.093 . PKNH_0909600 100 GSSQLTR|VR 0.093 . PKNH_0909600 102 SQLTRVR|EK 0.076 . PKNH_0909600 104 LTRVREK|ES 0.065 . PKNH_0909600 108 REKESLK|YN 0.062 . PKNH_0909600 117 NVFTYIK|RG 0.059 . PKNH_0909600 118 VFTYIKR|GF 0.136 . PKNH_0909600 137 LYFFMNK|HN 0.060 . PKNH_0909600 148 LQWIDNK|QI 0.067 . PKNH_0909600 152 DNKQILR|KI 0.082 . PKNH_0909600 153 NKQILRK|IN 0.093 . PKNH_0909600 158 RKINNIK|DN 0.073 . PKNH_0909600 174 SDQLNDK|KL 0.064 . PKNH_0909600 175 DQLNDKK|LI 0.082 . PKNH_0909600 185 FVVNIVR|IN 0.067 . PKNH_0909600 195 FDFYQHR|HF 0.102 . PKNH_0909600 201 RHFYTIR|KI 0.118 . PKNH_0909600 202 HFYTIRK|IS 0.083 . PKNH_0909600 216 LDSTLSK|PV 0.070 . PKNH_0909600 235 HLFNTVK|DN 0.065 . PKNH_0909600 238 NTVKDNK|FN 0.058 . PKNH_0909600 241 KDNKFNK|SD 0.104 . PKNH_0909600 251 YIIQVFK|RE 0.058 . PKNH_0909600 252 IIQVFKR|EN 0.187 . PKNH_0909600 258 RENNHDK|-- 0.083 . ____________________________^_________________

  • Fasta :-

    >PKNH_0909600 ATGTGCCACTATGAAACACACGCAATTGAAACGGAAAGAGGTTTAATAAACGTGTATTTT GAAAGGCAGAGCAAATTGTATTGTTTGCTTCACACTGCAAACAACATTTTACAGGCACAT GTATATTCCCCCGACGATTTTAAAGACGCCGAAATTATTCTGCATAATGCCTCTGTGGGG TTGAGTACGTTAAGCGGTGACCAGGCAGATGATTCCGAGGGAGACCACGCTGATCAGAAT AGCAAAAATTGTTACGTCCCCGATGGAGATGGCAACCGTGGTAGTAGCCAGCTCACCCGC GTCAGAGAGAAGGAATCGCTAAAATACAATAATGTCTTCACATACATTAAAAGAGGCTTC CACTACTTTGGAAATTTCAACATCAACATTTTGTACTTCTTCATGAACAAGCACAACATT GATCTGCAGTGGATTGACAACAAGCAGATATTGCGCAAAATAAATAACATCAAAGACAAT ACATGTGCCACACTCTTCGATAGTGACCAGCTAAATGACAAAAAGTTAATTGCATTTGTG GTGAACATCGTTCGGATAAACCTTTTTGATTTCTACCAACACCGTCATTTTTACACGATA AGGAAAATTTCAGGAATGTGGTTCCAGCTGGATTCTACTCTGAGTAAACCCGTTATGTTA CCCACAAATGAAGATTTAAATAATCACTTATTTAACACAGTAAAGGATAACAAATTTAAC AAATCTGATAATTACATCATACAAGTTTTTAAGAGGGAGAATAATCATGACAAATAA
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  • Fasta :-

    MCHYETHAIETERGLINVYFERQSKLYCLLHTANNILQAHVYSPDDFKDAEIILHNASVG LSTLSGDQADDSEGDHADQNSKNCYVPDGDGNRGSSQLTRVREKESLKYNNVFTYIKRGF HYFGNFNINILYFFMNKHNIDLQWIDNKQILRKINNIKDNTCATLFDSDQLNDKKLIAFV VNIVRINLFDFYQHRHFYTIRKISGMWFQLDSTLSKPVMLPTNEDLNNHLFNTVKDNKFN KSDNYIIQVFKRENNHDK

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IDSitePeptideScoreMethod
PKNH_090960072 SQADDSEGDH0.997unsp

PK11_0870w      PKH_090920      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India