PKNH_0912800 | knowpain-4

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:  GO:0020020      

  • Curated_GO_Components:  food vacuole      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0912800OTHER0.9995770.0004050.000018
No Results

  • Fasta :-

    >PKNH_0912800 MEYHMEYSNDSSHKPEKELFMEKSFGGRKDKGKKRFLYVLSVAAICLVAGSAFYFTRTEK TNDDNNNDDMIINTLLKSPGGKKFIISKLTELVASYDKEGNLQEQKPSNELISFVDKNEK SEENFRKRFGNLKNGKKIVDINFADSRFLMTNLENVNSFYLFIKEHGKKYQTPDEMQQRY LSFVENLAKINAHNNKENVLYKKGTNQYSDMSFEEFRKTMLTLRFDLTRKIGNSPHVSNY DDVLKKYKPADAVVDNEKYDWREHNAVSEIKNQDLCGSCWAFGAVGAVESQYAIRKNQHI LISEQELVDCSDKNFGCYGGLASSAFDDIIDLGYLCSESEYPYVGFKPRTCEIRKCKEKY TIKSYVSIPEDKYKEAIQFLGPLTLGLTVNDDFYYYQEGIFTSDCTEEPNHEVMIVGYGV EETFNSELNANEKHYYYIIKNSWGVSWGEKGFMRIETDELGLKKTNNMTDAYVPLLD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0912800.fa Sequence name : PKNH_0912800 Sequence length : 477 VALUES OF COMPUTED PARAMETERS Coef20 : 2.652 CoefTot : 0.000 ChDiff : -11 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.988 2.218 0.461 0.732 MesoH : -0.861 0.107 -0.345 0.178 MuHd_075 : 5.867 7.433 3.237 1.763 MuHd_095 : 40.529 13.849 10.579 4.549 MuHd_100 : 38.383 14.356 9.552 4.431 MuHd_105 : 28.876 11.633 7.036 3.257 Hmax_075 : -11.900 -6.533 -5.883 -0.490 Hmax_095 : -2.800 -6.100 -3.769 -0.100 Hmax_100 : 5.400 -3.400 -2.725 0.460 Hmax_105 : -5.200 -6.400 -4.847 -0.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9984 0.0016 DFMC : 0.9954 0.0046
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 477 PKNH_0912800 MEYHMEYSNDSSHKPEKELFMEKSFGGRKDKGKKRFLYVLSVAAICLVAGSAFYFTRTEKTNDDNNNDDMIINTLLKSPG 80 GKKFIISKLTELVASYDKEGNLQEQKPSNELISFVDKNEKSEENFRKRFGNLKNGKKIVDINFADSRFLMTNLENVNSFY 160 LFIKEHGKKYQTPDEMQQRYLSFVENLAKINAHNNKENVLYKKGTNQYSDMSFEEFRKTMLTLRFDLTRKIGNSPHVSNY 240 DDVLKKYKPADAVVDNEKYDWREHNAVSEIKNQDLCGSCWAFGAVGAVESQYAIRKNQHILISEQELVDCSDKNFGCYGG 320 LASSAFDDIIDLGYLCSESEYPYVGFKPRTCEIRKCKEKYTIKSYVSIPEDKYKEAIQFLGPLTLGLTVNDDFYYYQEGI 400 FTSDCTEEPNHEVMIVGYGVEETFNSELNANEKHYYYIIKNSWGVSWGEKGFMRIETDELGLKKTNNMTDAYVPLLD 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0912800 14 SNDSSHK|PE 0.066 . PKNH_0912800 17 SSHKPEK|EL 0.076 . PKNH_0912800 23 KELFMEK|SF 0.075 . PKNH_0912800 28 EKSFGGR|KD 0.088 . PKNH_0912800 29 KSFGGRK|DK 0.118 . PKNH_0912800 31 FGGRKDK|GK 0.141 . PKNH_0912800 33 GRKDKGK|KR 0.072 . PKNH_0912800 34 RKDKGKK|RF 0.084 . PKNH_0912800 35 KDKGKKR|FL 0.207 . PKNH_0912800 57 SAFYFTR|TE 0.086 . PKNH_0912800 60 YFTRTEK|TN 0.105 . PKNH_0912800 77 IINTLLK|SP 0.083 . PKNH_0912800 82 LKSPGGK|KF 0.072 . PKNH_0912800 83 KSPGGKK|FI 0.115 . PKNH_0912800 88 KKFIISK|LT 0.062 . PKNH_0912800 98 LVASYDK|EG 0.056 . PKNH_0912800 106 GNLQEQK|PS 0.057 . PKNH_0912800 117 LISFVDK|NE 0.067 . PKNH_0912800 120 FVDKNEK|SE 0.068 . PKNH_0912800 126 KSEENFR|KR 0.080 . PKNH_0912800 127 SEENFRK|RF 0.107 . PKNH_0912800 128 EENFRKR|FG 0.170 . PKNH_0912800 133 KRFGNLK|NG 0.063 . PKNH_0912800 136 GNLKNGK|KI 0.067 . PKNH_0912800 137 NLKNGKK|IV 0.138 . PKNH_0912800 147 INFADSR|FL 0.112 . PKNH_0912800 164 SFYLFIK|EH 0.073 . PKNH_0912800 168 FIKEHGK|KY 0.062 . PKNH_0912800 169 IKEHGKK|YQ 0.127 . PKNH_0912800 179 PDEMQQR|YL 0.135 . PKNH_0912800 189 FVENLAK|IN 0.059 . PKNH_0912800 196 INAHNNK|EN 0.065 . PKNH_0912800 202 KENVLYK|KG 0.069 . PKNH_0912800 203 ENVLYKK|GT 0.125 . PKNH_0912800 217 MSFEEFR|KT 0.086 . PKNH_0912800 218 SFEEFRK|TM 0.069 . PKNH_0912800 224 KTMLTLR|FD 0.071 . PKNH_0912800 229 LRFDLTR|KI 0.129 . PKNH_0912800 230 RFDLTRK|IG 0.061 . PKNH_0912800 245 NYDDVLK|KY 0.059 . PKNH_0912800 246 YDDVLKK|YK 0.082 . PKNH_0912800 248 DVLKKYK|PA 0.083 . PKNH_0912800 258 AVVDNEK|YD 0.062 . PKNH_0912800 262 NEKYDWR|EH 0.082 . PKNH_0912800 271 NAVSEIK|NQ 0.062 . PKNH_0912800 295 ESQYAIR|KN 0.101 . PKNH_0912800 296 SQYAIRK|NQ 0.081 . PKNH_0912800 313 LVDCSDK|NF 0.062 . PKNH_0912800 347 YPYVGFK|PR 0.058 . PKNH_0912800 349 YVGFKPR|TC 0.094 . PKNH_0912800 354 PRTCEIR|KC 0.088 . PKNH_0912800 355 RTCEIRK|CK 0.083 . PKNH_0912800 357 CEIRKCK|EK 0.149 . PKNH_0912800 359 IRKCKEK|YT 0.093 . PKNH_0912800 363 KEKYTIK|SY 0.074 . PKNH_0912800 372 VSIPEDK|YK 0.077 . PKNH_0912800 374 IPEDKYK|EA 0.089 . PKNH_0912800 433 ELNANEK|HY 0.070 . PKNH_0912800 440 HYYYIIK|NS 0.068 . PKNH_0912800 450 GVSWGEK|GF 0.087 . PKNH_0912800 454 GEKGFMR|IE 0.105 . PKNH_0912800 463 TDELGLK|KT 0.058 . PKNH_0912800 464 DELGLKK|TN 0.072 . ____________________________^_________________

  • Fasta :-

    >PKNH_0912800 ATGGAATATCACATGGAGTATTCGAACGATAGTTCTCATAAACCGGAGAAGGAACTATTT ATGGAGAAATCGTTTGGTGGTCGAAAGGACAAGGGGAAAAAAAGGTTCCTTTATGTTTTG TCCGTTGCAGCTATATGCCTTGTAGCAGGTTCGGCATTTTACTTTACACGAACAGAAAAA ACAAATGATGATAACAATAACGATGATATGATTATTAACACTTTGTTGAAAAGTCCAGGA GGAAAAAAATTTATTATTTCCAAGTTAACCGAACTGGTTGCTTCATATGATAAGGAAGGA AATCTCCAGGAACAAAAACCATCCAACGAATTGATTTCCTTTGTGGACAAAAATGAAAAG AGTGAAGAAAATTTCAGAAAACGTTTTGGAAATTTAAAAAATGGAAAGAAAATAGTGGAT ATCAATTTTGCGGACTCCAGATTTTTGATGACGAATTTGGAAAATGTAAATTCATTCTAT CTTTTTATTAAAGAGCATGGAAAAAAATATCAAACTCCAGATGAAATGCAACAGAGATAT TTATCCTTTGTAGAAAATTTAGCAAAAATAAATGCACACAATAATAAAGAAAATGTTTTG TACAAAAAAGGAACAAACCAGTACAGTGACATGAGCTTTGAGGAGTTCCGAAAGACCATG CTAACTTTACGATTTGACTTAACTAGAAAAATTGGCAATTCACCCCACGTGAGTAATTAC GATGATGTATTAAAGAAATACAAACCCGCAGATGCTGTGGTCGACAATGAGAAGTATGAC TGGCGAGAACACAACGCAGTGAGCGAAATAAAAAATCAAGACTTATGTGGTTCATGCTGG GCCTTTGGAGCTGTAGGGGCTGTGGAATCCCAGTACGCCATTCGAAAAAATCAACACATA TTAATAAGTGAACAAGAATTGGTAGATTGTTCTGATAAAAACTTTGGCTGCTATGGTGGT TTAGCTTCCTCTGCTTTTGATGATATAATTGACTTAGGGTATTTGTGCTCCGAAAGCGAA TATCCCTACGTTGGATTCAAACCTCGTACATGTGAAATCCGTAAATGCAAAGAAAAATAC ACCATCAAAAGTTACGTTAGCATTCCTGAGGACAAATATAAAGAGGCTATTCAGTTCCTT GGACCTCTAACTTTGGGACTGACTGTGAATGACGACTTCTACTACTACCAGGAGGGAATC TTCACTTCCGACTGTACAGAAGAACCAAACCATGAAGTTATGATTGTGGGTTATGGTGTG GAGGAAACTTTCAACAGTGAATTAAATGCTAATGAGAAACATTACTATTACATTATTAAA AACTCCTGGGGAGTTTCGTGGGGTGAAAAAGGATTCATGAGAATTGAGACGGACGAGTTG GGTTTGAAAAAGACCAACAACATGACCGATGCATATGTCCCCCTGCTTGACTAG
  • Download Fasta

  • Fasta :-

    MEYHMEYSNDSSHKPEKELFMEKSFGGRKDKGKKRFLYVLSVAAICLVAGSAFYFTRTEK TNDDNNNDDMIINTLLKSPGGKKFIISKLTELVASYDKEGNLQEQKPSNELISFVDKNEK SEENFRKRFGNLKNGKKIVDINFADSRFLMTNLENVNSFYLFIKEHGKKYQTPDEMQQRY LSFVENLAKINAHNNKENVLYKKGTNQYSDMSFEEFRKTMLTLRFDLTRKIGNSPHVSNY DDVLKKYKPADAVVDNEKYDWREHNAVSEIKNQDLCGSCWAFGAVGAVESQYAIRKNQHI LISEQELVDCSDKNFGCYGGLASSAFDDIIDLGYLCSESEYPYVGFKPRTCEIRKCKEKY TIKSYVSIPEDKYKEAIQFLGPLTLGLTVNDDFYYYQEGIFTSDCTEEPNHEVMIVGYGV EETFNSELNANEKHYYYIIKNSWGVSWGEKGFMRIETDELGLKKTNNMTDAYVPLLD

  • title: active site
  • coordinates: Q273,C279,H411,N441
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0912800367 SKSYVSIPED0.995unspPKNH_0912800367 SKSYVSIPED0.995unspPKNH_0912800367 SKSYVSIPED0.995unspPKNH_0912800121 SKNEKSEENF0.993unspPKNH_0912800212 SYSDMSFEEF0.996unsp

PK11_1200c      PKH_091240      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India