PKNH_0913000 | knowpain-2

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:  GO:0020020      

  • Curated_GO_Components:  food vacuole      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0913000OTHER0.9992880.0006710.000041
No Results

  • Fasta :-

    >PKNH_0913000 MEYQVEYTSNDSAKSEKEAFVQNSYNQTNGKGRRRFLYVLSVAAICLVAGSAFYFTRTEK TNDDNNSDDVIINTLLKSPGGKKFIISKLTELVASYDKEGNLQEQKPSNELISFVDRNEK SEENFRKRFGNLKNGKKIVDINFADSRFLMTNLENVNSFYLFIKEHGKKYQTPDEMQQRY LSFVENLAKINAHNNKENVSYKKGMNRFGDMSFEEFEKKYLTLKTFDFKSNGLKSTQLIS YDDVINRYKPKDDKFDHTKYDWRLHRGVTPVKDQGDCGSCWAFSTVGVVESQYLIRKNEL VSISEQQMVDCSLQNNGCDGGFIPRALEDIIEMKGLCSTEAYPYVGEVPEKCKYDMCDRK YKINSFFEIPEFKFKEAVRYLGPISVNIAVSDDFAFYQGGIFNGECGRTTNHAVILVGFG AEDVYDSDMNTTRKRYYYIIKNSWGVSWGERGFIRMETDINGYRKPCLLGLEAFGVLVE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0913000.fa Sequence name : PKNH_0913000 Sequence length : 479 VALUES OF COMPUTED PARAMETERS Coef20 : 3.228 CoefTot : 0.000 ChDiff : -2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.988 2.218 0.461 0.732 MesoH : -0.945 0.084 -0.398 0.176 MuHd_075 : 16.032 7.729 3.770 0.892 MuHd_095 : 33.557 16.565 9.172 3.953 MuHd_100 : 29.830 15.957 8.382 4.038 MuHd_105 : 19.904 12.032 6.357 3.271 Hmax_075 : -7.467 -3.383 -5.092 -1.003 Hmax_095 : -2.013 -1.225 -3.021 0.315 Hmax_100 : 0.800 -0.500 -2.025 0.520 Hmax_105 : 0.800 -0.500 -2.025 0.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9953 0.0047 DFMC : 0.9921 0.0079
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 479 PKNH_0913000 MEYQVEYTSNDSAKSEKEAFVQNSYNQTNGKGRRRFLYVLSVAAICLVAGSAFYFTRTEKTNDDNNSDDVIINTLLKSPG 80 GKKFIISKLTELVASYDKEGNLQEQKPSNELISFVDRNEKSEENFRKRFGNLKNGKKIVDINFADSRFLMTNLENVNSFY 160 LFIKEHGKKYQTPDEMQQRYLSFVENLAKINAHNNKENVSYKKGMNRFGDMSFEEFEKKYLTLKTFDFKSNGLKSTQLIS 240 YDDVINRYKPKDDKFDHTKYDWRLHRGVTPVKDQGDCGSCWAFSTVGVVESQYLIRKNELVSISEQQMVDCSLQNNGCDG 320 GFIPRALEDIIEMKGLCSTEAYPYVGEVPEKCKYDMCDRKYKINSFFEIPEFKFKEAVRYLGPISVNIAVSDDFAFYQGG 400 IFNGECGRTTNHAVILVGFGAEDVYDSDMNTTRKRYYYIIKNSWGVSWGERGFIRMETDINGYRKPCLLGLEAFGVLVE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >PKNH_0913000 ATGGAGTATCAGGTTGAATATACTTCTAACGATTCTGCTAAATCTGAGAAGGAGGCTTTT GTACAGAACTCGTATAATCAAACAAATGGAAAAGGAAGGAGGAGATTCCTTTATGTTTTG TCCGTTGCAGCTATATGCCTTGTAGCAGGTTCTGCATTTTACTTTACACGAACAGAAAAA ACAAATGATGATAACAATAGCGATGATGTGATTATTAACACTTTGTTGAAAAGTCCAGGA GGAAAAAAATTTATTATTTCCAAGTTAACCGAACTGGTTGCTTCATATGATAAGGAAGGA AACCTCCAGGAGCAGAAACCATCCAACGAATTGATTTCTTTTGTGGACAGAAATGAAAAG AGTGAAGAAAATTTCAGAAAACGTTTTGGAAATTTAAAAAATGGAAAGAAAATTGTGGAT ATCAATTTTGCCGACTCCAGATTTTTGATGACGAATTTGGAAAATGTAAATTCATTCTAT CTTTTTATAAAAGAACATGGAAAGAAATATCAAACACCAGATGAAATGCAACAGAGATAT TTATCTTTTGTAGAAAATTTAGCAAAAATAAATGCACACAATAATAAAGAAAATGTTTCG TACAAAAAAGGAATGAATCGTTTTGGAGATATGTCCTTTGAAGAATTTGAAAAAAAATAT TTGACCTTAAAAACCTTCGACTTTAAATCAAATGGTTTAAAATCTACACAATTGATCAGC TACGATGACGTAATTAACAGGTACAAGCCAAAGGATGATAAGTTCGATCATACTAAATAC GATTGGAGACTACACAGAGGTGTTACTCCTGTGAAGGACCAAGGGGATTGCGGATCTTGC TGGGCATTTAGCACAGTAGGAGTGGTTGAATCACAATATTTAATCAGGAAAAACGAATTA GTATCCATAAGCGAGCAACAAATGGTAGATTGCTCCTTACAAAACAATGGCTGCGATGGA GGTTTCATCCCCCGTGCCCTTGAGGACATCATTGAAATGAAAGGACTGTGCTCAACTGAA GCTTATCCATATGTAGGAGAAGTTCCAGAAAAATGCAAATATGATATGTGTGATAGGAAG TACAAAATTAATAGCTTCTTTGAAATTCCTGAATTCAAATTTAAAGAGGCTGTTAGGTAT CTTGGACCCATAAGTGTGAATATAGCTGTAAGTGATGATTTTGCTTTTTACCAGGGAGGT ATATTTAACGGGGAATGTGGCCGTACGACGAACCATGCCGTCATTCTTGTCGGTTTTGGA GCTGAAGATGTGTACGACTCTGATATGAATACTACCAGGAAGCGCTACTATTACATTATT AAAAACTCCTGGGGAGTTTCGTGGGGTGAAAGAGGATTCATTCGTATGGAGACCGACATA AATGGGTACAGAAAGCCCTGTCTCCTTGGCCTGGAAGCCTTCGGTGTCCTCGTGGAGTAA
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  • Fasta :-

    MEYQVEYTSNDSAKSEKEAFVQNSYNQTNGKGRRRFLYVLSVAAICLVAGSAFYFTRTEK TNDDNNSDDVIINTLLKSPGGKKFIISKLTELVASYDKEGNLQEQKPSNELISFVDRNEK SEENFRKRFGNLKNGKKIVDINFADSRFLMTNLENVNSFYLFIKEHGKKYQTPDEMQQRY LSFVENLAKINAHNNKENVSYKKGMNRFGDMSFEEFEKKYLTLKTFDFKSNGLKSTQLIS YDDVINRYKPKDDKFDHTKYDWRLHRGVTPVKDQGDCGSCWAFSTVGVVESQYLIRKNEL VSISEQQMVDCSLQNNGCDGGFIPRALEDIIEMKGLCSTEAYPYVGEVPEKCKYDMCDRK YKINSFFEIPEFKFKEAVRYLGPISVNIAVSDDFAFYQGGIFNGECGRTTNHAVILVGFG AEDVYDSDMNTTRKRYYYIIKNSWGVSWGERGFIRMETDINGYRKPCLLGLEAFGVLVE

  • title: active site
  • coordinates: Q274,C280,H412,N442
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0913000212 SFGDMSFEEF0.995unspPKNH_0913000212 SFGDMSFEEF0.995unspPKNH_0913000212 SFGDMSFEEF0.995unspPKNH_091300012 STSNDSAKSE0.993unspPKNH_091300015 SDSAKSEKEA0.998unsp

PK11_1220c      PKH_091260      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India