PKNH_0928500 | 26S protease regulatory subunit 6A, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0928500OTHER0.9999920.0000040.000004
No Results

  • Fasta :-

    >PKNH_0928500 MNVENIFPNNDVNVEEIENLTNSEIRTRISLIETEIKILKNEHTRLKNEYKNLQEKIKDN VEKIHLNKMLPYLVANVVESLDLEDDEESNEPKDEYDLYVNNSKGNNDEGFRDIDDEKRG KCMVIKTSTRQTIFLPVPGLIEASELKPGDLVGVNKDSYLIIDKLPPEYDNRVKAMEVIE KPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARA CASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSE LSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNE ESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHED FVEGITSVLSKKKSTLNYFT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0928500.fa Sequence name : PKNH_0928500 Sequence length : 440 VALUES OF COMPUTED PARAMETERS Coef20 : 3.000 CoefTot : -0.134 ChDiff : -19 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.829 1.012 -0.103 0.465 MesoH : -0.580 0.277 -0.410 0.197 MuHd_075 : 18.004 15.865 5.642 4.729 MuHd_095 : 10.901 10.414 2.978 2.524 MuHd_100 : 17.503 15.831 5.553 3.976 MuHd_105 : 21.020 17.449 6.668 4.475 Hmax_075 : 2.200 7.100 -1.587 3.400 Hmax_095 : -2.362 8.487 -2.281 3.412 Hmax_100 : 5.500 13.200 -0.165 4.680 Hmax_105 : 5.500 13.200 -0.165 4.640 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9753 0.0247 DFMC : 0.9675 0.0325
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 440 PKNH_0928500 MNVENIFPNNDVNVEEIENLTNSEIRTRISLIETEIKILKNEHTRLKNEYKNLQEKIKDNVEKIHLNKMLPYLVANVVES 80 LDLEDDEESNEPKDEYDLYVNNSKGNNDEGFRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIEASELKPGDLVGVNKDSYL 160 IIDKLPPEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARA 240 CASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDG 320 FSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAV 400 CVEAGMIALRRGATEIDHEDFVEGITSVLSKKKSTLNYFT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0928500 26 LTNSEIR|TR 0.088 . PKNH_0928500 28 NSEIRTR|IS 0.078 . PKNH_0928500 37 LIETEIK|IL 0.059 . PKNH_0928500 40 TEIKILK|NE 0.061 . PKNH_0928500 45 LKNEHTR|LK 0.089 . PKNH_0928500 47 NEHTRLK|NE 0.062 . PKNH_0928500 51 RLKNEYK|NL 0.074 . PKNH_0928500 56 YKNLQEK|IK 0.077 . PKNH_0928500 58 NLQEKIK|DN 0.081 . PKNH_0928500 63 IKDNVEK|IH 0.063 . PKNH_0928500 68 EKIHLNK|ML 0.062 . PKNH_0928500 93 EESNEPK|DE 0.076 . PKNH_0928500 104 LYVNNSK|GN 0.065 . PKNH_0928500 112 NNDEGFR|DI 0.120 . PKNH_0928500 118 RDIDDEK|RG 0.053 . PKNH_0928500 119 DIDDEKR|GK 0.176 . PKNH_0928500 121 DDEKRGK|CM 0.059 . PKNH_0928500 126 GKCMVIK|TS 0.070 . PKNH_0928500 130 VIKTSTR|QT 0.078 . PKNH_0928500 147 IEASELK|PG 0.062 . PKNH_0928500 156 DLVGVNK|DS 0.072 . PKNH_0928500 164 SYLIIDK|LP 0.051 . PKNH_0928500 172 PPEYDNR|VK 0.071 . PKNH_0928500 174 EYDNRVK|AM 0.069 . PKNH_0928500 181 AMEVIEK|PS 0.066 . PKNH_0928500 194 DIGGLDK|QI 0.070 . PKNH_0928500 210 VLPMLHK|EK 0.060 . PKNH_0928500 212 PMLHKEK|FE 0.066 . PKNH_0928500 215 HKEKFEK|IG 0.065 . PKNH_0928500 219 FEKIGIK|PP 0.070 . PKNH_0928500 222 IGIKPPK|GV 0.100 . PKNH_0928500 234 GPPGTGK|TL 0.059 . PKNH_0928500 239 GKTLLAR|AC 0.090 . PKNH_0928500 251 TNATFLK|LA 0.118 . PKNH_0928500 267 FIGDGAK|MV 0.085 . PKNH_0928500 270 DGAKMVR|DA 0.122 . PKNH_0928500 277 DAFNLAK|EK 0.067 . PKNH_0928500 279 FNLAKEK|AP 0.061 . PKNH_0928500 295 LDAIGTK|RF 0.062 . PKNH_0928500 296 DAIGTKR|FD 0.174 . PKNH_0928500 305 SELSGDR|EV 0.080 . PKNH_0928500 309 GDREVQR|TM 0.096 . PKNH_0928500 328 STDDTVK|VI 0.057 . PKNH_0928500 335 VIAATNR|PD 0.077 . PKNH_0928500 345 LDPALLR|SG 0.086 . PKNH_0928500 348 ALLRSGR|LD 0.220 . PKNH_0928500 351 RSGRLDR|KI 0.247 . PKNH_0928500 352 SGRLDRK|IE 0.071 . PKNH_0928500 363 HPNEESR|AR 0.108 . PKNH_0928500 365 NEESRAR|IL 0.090 . PKNH_0928500 372 ILQIHSR|KM 0.090 . PKNH_0928500 373 LQIHSRK|MN 0.092 . PKNH_0928500 378 RKMNVHK|DV 0.132 . PKNH_0928500 387 NFEELAR|ST 0.126 . PKNH_0928500 398 FNGAQLK|AV 0.088 . PKNH_0928500 410 AGMIALR|RG 0.095 . PKNH_0928500 411 GMIALRR|GA 0.209 . PKNH_0928500 431 ITSVLSK|KK 0.073 . PKNH_0928500 432 TSVLSKK|KS 0.096 . PKNH_0928500 433 SVLSKKK|ST 0.150 . ____________________________^_________________

  • Fasta :-

    >PKNH_0928500 ATGAACGTCGAAAACATATTCCCGAACAATGACGTAAACGTGGAGGAAATAGAAAATCTC ACGAACAGCGAAATCAGAACGAGGATCAGCTTGATCGAGACGGAAATAAAAATATTAAAA AATGAGCACACGAGGCTGAAAAATGAATACAAGAATCTGCAGGAGAAAATAAAGGACAAC GTGGAAAAGATACATCTAAATAAGATGCTCCCATATTTAGTTGCGAATGTCGTAGAATCG CTAGATCTGGAGGACGACGAAGAATCAAATGAACCAAAAGATGAATACGATCTGTACGTG AATAATTCAAAAGGAAACAACGATGAAGGTTTTCGAGACATAGATGATGAAAAGAGAGGA AAGTGTATGGTTATAAAAACGTCAACCAGACAAACAATATTTTTACCTGTCCCTGGTTTG ATAGAAGCATCCGAATTGAAACCAGGAGATCTCGTGGGAGTAAACAAAGACAGTTACCTC ATCATAGATAAGTTACCCCCTGAGTATGATAATCGCGTAAAAGCTATGGAAGTTATTGAA AAGCCTTCGGAAGATTATTCAGACATTGGAGGTTTAGATAAGCAGATTGAAGATCTGGTC GAAGCAATTGTATTACCTATGTTACATAAGGAGAAATTTGAGAAAATCGGGATCAAACCT CCCAAAGGAGTTCTAATGCATGGTCCACCAGGTACAGGTAAAACACTACTAGCTAGAGCT TGTGCTTCACAAACCAATGCAACTTTTTTAAAACTAGCCGGTCCACAGCTTGTGCAAATG TTTATTGGTGATGGGGCAAAAATGGTGAGAGATGCATTCAATTTAGCCAAGGAGAAGGCA CCAGCCATTATTTTTATAGACGAGTTAGATGCAATAGGAACTAAAAGATTCGATAGCGAA CTGTCTGGGGATAGGGAAGTACAAAGAACCATGTTAGAATTACTAAATCAGCTTGACGGG TTCAGTACTGATGACACTGTTAAAGTTATCGCTGCAACGAATAGACCAGATACACTGGAT CCAGCTCTACTTCGATCGGGTAGATTGGATAGAAAAATTGAACTACCTCATCCTAATGAA GAATCGAGAGCCAGAATTCTGCAAATTCATTCTCGAAAAATGAACGTTCACAAGGATGTG AATTTTGAGGAATTGGCTCGATCCACTGATGATTTTAATGGGGCCCAGCTCAAGGCTGTT TGCGTGGAGGCCGGGATGATTGCCCTTAGACGTGGCGCCACCGAAATCGACCACGAGGAC TTCGTCGAGGGGATCACCTCCGTCCTGTCCAAGAAGAAAAGCACACTCAATTATTTTACC TAG
  • Download Fasta

  • Fasta :-

    MNVENIFPNNDVNVEEIENLTNSEIRTRISLIETEIKILKNEHTRLKNEYKNLQEKIKDN VEKIHLNKMLPYLVANVVESLDLEDDEESNEPKDEYDLYVNNSKGNNDEGFRDIDDEKRG KCMVIKTSTRQTIFLPVPGLIEASELKPGDLVGVNKDSYLIIDKLPPEYDNRVKAMEVIE KPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARA CASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSE LSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNE ESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHED FVEGITSVLSKKKSTLNYFT

  • title: ATP binding site
  • coordinates: P229,P230,G231,T232,G233,K234,T235,L236,D287,N334
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0928500430 STSVLSKKKS0.995unspPKNH_0928500430 STSVLSKKKS0.995unspPKNH_0928500430 STSVLSKKKS0.995unspPKNH_092850030 SRTRISLIET0.998unspPKNH_0928500299 SKRFDSELSG0.994unsp

PK11_2810w      PKH_092800      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India