PKNH_0939500 | OTU domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_0939500OTHER0.9999880.0000000.000011
No Results

  • Fasta :-

    >PKNH_0939500 MDGGKNENRISYHEYKRRLKKLTEEIKKEKKKKTINKNKNNENLTKLEEELSKLNAMYNL GNADEGSEINNSEKRKDHDGEENTREDIADGVTTTELYSYNAVSKKALRNIKRTQRKEME IERIEQSRSKVGELEYDELVECLKEVNKTIHPIAPDGNCLYESILHQLRQRVTGCKYHEE DFLNILREERFSLDNINLRDYQNGGLFDFSIFSDFDPQGLSSDILRFLASVYILQNEEQF IHFVYATEEDEPTADTYFGYCEAIIKGCYGSEIEINALSKILKKKITVYDVNIKISYGEE HETELFICFHHKLYALGKHYNSVVDI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0939500.fa Sequence name : PKNH_0939500 Sequence length : 326 VALUES OF COMPUTED PARAMETERS Coef20 : 3.211 CoefTot : 0.000 ChDiff : -13 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.106 1.024 -0.086 0.357 MesoH : -0.920 0.103 -0.433 0.218 MuHd_075 : 22.513 13.859 5.262 4.582 MuHd_095 : 31.880 9.002 8.575 5.868 MuHd_100 : 23.069 7.770 6.657 4.087 MuHd_105 : 12.352 7.528 4.222 2.686 Hmax_075 : -8.400 -3.617 -5.112 -0.187 Hmax_095 : -10.000 -9.300 -5.001 -0.220 Hmax_100 : -10.000 -8.600 -5.332 -0.820 Hmax_105 : -23.000 -8.600 -6.461 -1.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9689 0.0311 DFMC : 0.9560 0.0440
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 326 PKNH_0939500 MDGGKNENRISYHEYKRRLKKLTEEIKKEKKKKTINKNKNNENLTKLEEELSKLNAMYNLGNADEGSEINNSEKRKDHDG 80 EENTREDIADGVTTTELYSYNAVSKKALRNIKRTQRKEMEIERIEQSRSKVGELEYDELVECLKEVNKTIHPIAPDGNCL 160 YESILHQLRQRVTGCKYHEEDFLNILREERFSLDNINLRDYQNGGLFDFSIFSDFDPQGLSSDILRFLASVYILQNEEQF 240 IHFVYATEEDEPTADTYFGYCEAIIKGCYGSEIEINALSKILKKKITVYDVNIKISYGEEHETELFICFHHKLYALGKHY 320 NSVVDI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0939500 5 --MDGGK|NE 0.057 . PKNH_0939500 9 GGKNENR|IS 0.085 . PKNH_0939500 16 ISYHEYK|RR 0.068 . PKNH_0939500 17 SYHEYKR|RL 0.151 . PKNH_0939500 18 YHEYKRR|LK 0.116 . PKNH_0939500 20 EYKRRLK|KL 0.113 . PKNH_0939500 21 YKRRLKK|LT 0.393 . PKNH_0939500 27 KLTEEIK|KE 0.056 . PKNH_0939500 28 LTEEIKK|EK 0.081 . PKNH_0939500 30 EEIKKEK|KK 0.064 . PKNH_0939500 31 EIKKEKK|KK 0.088 . PKNH_0939500 32 IKKEKKK|KT 0.127 . PKNH_0939500 33 KKEKKKK|TI 0.170 . PKNH_0939500 37 KKKTINK|NK 0.069 . PKNH_0939500 39 KTINKNK|NN 0.070 . PKNH_0939500 46 NNENLTK|LE 0.060 . PKNH_0939500 53 LEEELSK|LN 0.057 . PKNH_0939500 74 EINNSEK|RK 0.067 . PKNH_0939500 75 INNSEKR|KD 0.333 . PKNH_0939500 76 NNSEKRK|DH 0.245 . PKNH_0939500 85 DGEENTR|ED 0.077 . PKNH_0939500 105 SYNAVSK|KA 0.069 . PKNH_0939500 106 YNAVSKK|AL 0.153 . PKNH_0939500 109 VSKKALR|NI 0.082 . PKNH_0939500 112 KALRNIK|RT 0.128 . PKNH_0939500 113 ALRNIKR|TQ 0.186 . PKNH_0939500 116 NIKRTQR|KE 0.229 . PKNH_0939500 117 IKRTQRK|EM 0.111 . PKNH_0939500 123 KEMEIER|IE 0.065 . PKNH_0939500 128 ERIEQSR|SK 0.152 . PKNH_0939500 130 IEQSRSK|VG 0.060 . PKNH_0939500 144 ELVECLK|EV 0.067 . PKNH_0939500 148 CLKEVNK|TI 0.072 . PKNH_0939500 169 SILHQLR|QR 0.074 . PKNH_0939500 171 LHQLRQR|VT 0.105 . PKNH_0939500 176 QRVTGCK|YH 0.067 . PKNH_0939500 187 DFLNILR|EE 0.068 . PKNH_0939500 190 NILREER|FS 0.172 . PKNH_0939500 199 LDNINLR|DY 0.106 . PKNH_0939500 226 LSSDILR|FL 0.111 . PKNH_0939500 266 YCEAIIK|GC 0.064 . PKNH_0939500 280 EINALSK|IL 0.071 . PKNH_0939500 283 ALSKILK|KK 0.073 . PKNH_0939500 284 LSKILKK|KI 0.097 . PKNH_0939500 285 SKILKKK|IT 0.108 . PKNH_0939500 294 VYDVNIK|IS 0.062 . PKNH_0939500 312 FICFHHK|LY 0.066 . PKNH_0939500 318 KLYALGK|HY 0.075 . ____________________________^_________________

  • Fasta :-

    >PKNH_0939500 ATGGATGGTGGAAAGAACGAAAATCGCATCAGTTATCATGAGTACAAAAGGAGGTTGAAG AAACTGACGGAGGAAATAAAAAAGGAGAAGAAAAAAAAGACGATTAACAAAAATAAGAAT AACGAAAATTTAACCAAACTGGAAGAGGAGCTGAGCAAACTGAACGCCATGTACAATCTT GGTAATGCAGACGAAGGAAGCGAAATAAATAACTCGGAAAAGCGTAAAGATCACGATGGA GAGGAAAATACACGTGAAGACATAGCCGATGGTGTAACTACCACGGAGCTGTACTCATAC AATGCAGTTTCGAAAAAGGCATTAAGAAATATAAAAAGAACCCAGAGAAAAGAGATGGAG ATTGAAAGGATTGAGCAGTCGAGAAGCAAAGTAGGAGAGCTTGAATATGATGAATTGGTT GAATGTTTAAAGGAAGTAAATAAAACTATCCATCCCATCGCTCCAGATGGAAATTGCCTG TATGAGTCGATTTTACACCAACTCAGGCAGAGGGTAACCGGCTGTAAATATCACGAAGAA GATTTTTTGAATATCCTACGTGAGGAAAGGTTTTCTCTGGATAATATAAATTTGAGGGAC TATCAAAACGGGGGTCTCTTTGACTTTAGCATTTTCTCCGATTTTGACCCACAGGGTTTG AGCAGTGACATACTGCGCTTTCTCGCTTCCGTGTATATTTTGCAGAACGAGGAACAGTTT ATTCATTTTGTGTATGCGACCGAGGAGGACGAGCCTACTGCTGACACCTACTTCGGTTAC TGTGAAGCTATTATAAAGGGATGTTACGGGAGCGAAATCGAAATCAATGCCCTCTCGAAA ATTCTGAAGAAGAAAATTACGGTCTATGACGTAAATATTAAAATTTCCTATGGAGAGGAA CACGAAACTGAACTGTTTATATGCTTCCACCATAAGTTGTATGCATTAGGGAAGCACTAC AATTCGGTCGTTGACATTTGA
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  • Fasta :-

    MDGGKNENRISYHEYKRRLKKLTEEIKKEKKKKTINKNKNNENLTKLEEELSKLNAMYNL GNADEGSEINNSEKRKDHDGEENTREDIADGVTTTELYSYNAVSKKALRNIKRTQRKEME IERIEQSRSKVGELEYDELVECLKEVNKTIHPIAPDGNCLYESILHQLRQRVTGCKYHEE DFLNILREERFSLDNINLRDYQNGGLFDFSIFSDFDPQGLSSDILRFLASVYILQNEEQF IHFVYATEEDEPTADTYFGYCEAIIKGCYGSEIEINALSKILKKKITVYDVNIKISYGEE HETELFICFHHKLYALGKHYNSVVDI

    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0939500104 SYNAVSKKAL0.991unspPKNH_0939500104 SYNAVSKKAL0.991unspPKNH_0939500104 SYNAVSKKAL0.991unspPKNH_093950011 SENRISYHEY0.993unspPKNH_093950072 SEINNSEKRK0.992unsp

PK11_4100w      PKH_093910      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India