PKNH_1005400 | methionine aminopeptidase 1a, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_1005400OTHER0.9371980.0006340.062169
No Results

  • Fasta :-

    >PKNH_1005400 MHKFLPALPKRNPNFHTHVLTPKINKIKVPEKSFFKPTLQDGKYKITPMQSVPGHIMRPP YAETGLVKNSNIEYEIKDEESIAKMKVAAKIAAQCLKLCLENSKEGVTTDDIDKMAFNFY IENGAYPAGINFHGFPKTVCASPNEVVCHGIPNLRKLKDGDIITYDCTVYVDGVFGDCAG TIGIGKISKSHQKLVDVSKECLYKAISVCKHGQKFSEIGRIITEHAHKNGFNVIQEFCGH FIGRNMHMYPLIEHHYPNGHPDDEYMQEGQIFTIEPILSEGSTKIHTWKDQWTVCTNDNA FCSQWEHTILVQQNGAEILTLCD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1005400.fa Sequence name : PKNH_1005400 Sequence length : 323 VALUES OF COMPUTED PARAMETERS Coef20 : 3.373 CoefTot : -2.307 ChDiff : -2 ZoneTo : 30 KR : 6 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.506 1.041 0.172 0.531 MesoH : -0.653 0.196 -0.322 0.228 MuHd_075 : 16.859 19.620 5.827 4.741 MuHd_095 : 30.058 21.636 8.889 6.940 MuHd_100 : 26.640 21.956 7.700 6.652 MuHd_105 : 18.625 16.890 6.495 5.126 Hmax_075 : 11.667 18.667 1.721 5.973 Hmax_095 : 8.600 10.700 -2.146 4.918 Hmax_100 : 7.800 10.700 -1.356 4.520 Hmax_105 : 6.400 4.000 0.050 3.440 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5051 0.4949 DFMC : 0.8093 0.1907
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 323 PKNH_1005400 MHKFLPALPKRNPNFHTHVLTPKINKIKVPEKSFFKPTLQDGKYKITPMQSVPGHIMRPPYAETGLVKNSNIEYEIKDEE 80 SIAKMKVAAKIAAQCLKLCLENSKEGVTTDDIDKMAFNFYIENGAYPAGINFHGFPKTVCASPNEVVCHGIPNLRKLKDG 160 DIITYDCTVYVDGVFGDCAGTIGIGKISKSHQKLVDVSKECLYKAISVCKHGQKFSEIGRIITEHAHKNGFNVIQEFCGH 240 FIGRNMHMYPLIEHHYPNGHPDDEYMQEGQIFTIEPILSEGSTKIHTWKDQWTVCTNDNAFCSQWEHTILVQQNGAEILT 320 LCD 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1005400 3 ----MHK|FL 0.069 . PKNH_1005400 10 FLPALPK|RN 0.061 . PKNH_1005400 11 LPALPKR|NP 0.162 . PKNH_1005400 23 THVLTPK|IN 0.067 . PKNH_1005400 26 LTPKINK|IK 0.056 . PKNH_1005400 28 PKINKIK|VP 0.069 . PKNH_1005400 32 KIKVPEK|SF 0.082 . PKNH_1005400 36 PEKSFFK|PT 0.061 . PKNH_1005400 43 PTLQDGK|YK 0.060 . PKNH_1005400 45 LQDGKYK|IT 0.064 . PKNH_1005400 58 VPGHIMR|PP 0.102 . PKNH_1005400 68 AETGLVK|NS 0.058 . PKNH_1005400 77 NIEYEIK|DE 0.074 . PKNH_1005400 84 DEESIAK|MK 0.063 . PKNH_1005400 86 ESIAKMK|VA 0.074 . PKNH_1005400 90 KMKVAAK|IA 0.080 . PKNH_1005400 97 IAAQCLK|LC 0.057 . PKNH_1005400 104 LCLENSK|EG 0.054 . PKNH_1005400 114 TTDDIDK|MA 0.060 . PKNH_1005400 137 NFHGFPK|TV 0.098 . PKNH_1005400 155 HGIPNLR|KL 0.083 . PKNH_1005400 156 GIPNLRK|LK 0.077 . PKNH_1005400 158 PNLRKLK|DG 0.146 . PKNH_1005400 186 GTIGIGK|IS 0.059 . PKNH_1005400 189 GIGKISK|SH 0.078 . PKNH_1005400 193 ISKSHQK|LV 0.087 . PKNH_1005400 199 KLVDVSK|EC 0.060 . PKNH_1005400 204 SKECLYK|AI 0.081 . PKNH_1005400 210 KAISVCK|HG 0.062 . PKNH_1005400 214 VCKHGQK|FS 0.072 . PKNH_1005400 220 KFSEIGR|II 0.096 . PKNH_1005400 228 ITEHAHK|NG 0.065 . PKNH_1005400 244 CGHFIGR|NM 0.099 . PKNH_1005400 284 LSEGSTK|IH 0.067 . PKNH_1005400 289 TKIHTWK|DQ 0.086 . ____________________________^_________________

  • Fasta :-

    >PKNH_1005400 ATGCATAAATTTTTACCTGCCTTACCAAAGAGGAATCCTAATTTCCATACCCATGTCTTA ACTCCCAAAATAAACAAAATTAAGGTTCCGGAGAAGAGTTTCTTCAAGCCGACACTCCAG GATGGCAAGTACAAAATAACACCGATGCAAAGCGTCCCTGGGCACATCATGCGCCCCCCC TACGCTGAAACTGGCTTGGTCAAAAATTCAAATATCGAGTACGAAATTAAGGATGAAGAA AGTATCGCTAAAATGAAAGTGGCTGCGAAAATTGCAGCCCAGTGTTTGAAGCTTTGTTTA GAAAATTCAAAAGAAGGGGTAACAACAGACGACATAGACAAAATGGCCTTCAATTTTTAC ATAGAAAATGGTGCCTACCCGGCTGGAATCAATTTCCATGGTTTTCCAAAAACTGTTTGT GCCTCACCGAACGAAGTGGTCTGCCACGGAATTCCCAACTTGAGGAAACTAAAAGACGGC GACATAATAACGTACGACTGCACGGTGTATGTCGATGGAGTCTTCGGAGACTGCGCCGGG ACCATAGGCATCGGAAAAATCTCGAAGAGCCATCAGAAATTAGTTGATGTCAGCAAAGAA TGCCTCTACAAAGCCATTTCTGTGTGTAAACATGGACAGAAATTCTCTGAAATTGGACGA ATCATAACTGAGCATGCACACAAAAATGGATTTAATGTGATACAAGAATTCTGTGGACAT TTCATTGGTCGAAATATGCACATGTATCCTTTGATTGAACATCATTATCCAAATGGCCAT CCAGATGATGAGTATATGCAAGAGGGACAGATATTCACAATCGAGCCGATTCTATCCGAG GGAAGTACAAAAATTCATACGTGGAAGGATCAATGGACTGTGTGTACCAACGACAATGCC TTTTGCTCGCAATGGGAACACACCATTCTGGTGCAGCAAAATGGTGCCGAAATATTGACC CTGTGTGATTAG
  • Download Fasta

  • Fasta :-

    MHKFLPALPKRNPNFHTHVLTPKINKIKVPEKSFFKPTLQDGKYKITPMQSVPGHIMRPP YAETGLVKNSNIEYEIKDEESIAKMKVAAKIAAQCLKLCLENSKEGVTTDDIDKMAFNFY IENGAYPAGINFHGFPKTVCASPNEVVCHGIPNLRKLKDGDIITYDCTVYVDGVFGDCAG TIGIGKISKSHQKLVDVSKECLYKAISVCKHGQKFSEIGRIITEHAHKNGFNVIQEFCGH FIGRNMHMYPLIEHHYPNGHPDDEYMQEGQIFTIEPILSEGSTKIHTWKDQWTVCTNDNA FCSQWEHTILVQQNGAEILTLCD

  • title: active site
  • coordinates: H149,D166,D177,H240,E275,E306
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PK5_2700c      PKH_100470      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India