PKNH_1109800 | PH domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_1109800OTHER0.9999840.0000130.000003
No Results

  • Fasta :-

    >PKNH_1109800 METTTKGGCNHVMQNDENKQEYLDFSDDFVFCSTCHNFSPYHKEGYLEKKCSNSWCGYSK RWFLLKNKKLYYFKSKESMRPSGVLDLELIHMDINYEHGIKRKRSGEDCFLYCIESRMYK NGSKNESLLILTPRNTGLRFYLRGDDAEIYEWYNLLNSSMKNNKITSQPNFIFSESNFWK IDRISVDVFESIADTGDIVLFRSKVVSAKLQRIITRGEYDHIGMILRNDKNGIFLLEALS NMGIILTPWELFRKNRWNEAYTRIALRRLTWDNSEQNLKKLLDFLKNTIGKKYNLKIINF LASKSDDAGYFCSELIGECWKIMGVIPTNTTCSYIWPSNFSEKFEEKMKLQEGCQLNNEL CIDFTL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1109800.fa Sequence name : PKNH_1109800 Sequence length : 366 VALUES OF COMPUTED PARAMETERS Coef20 : 2.846 CoefTot : -1.508 ChDiff : 4 ZoneTo : 15 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.218 1.429 0.087 0.631 MesoH : -0.994 0.321 -0.483 0.162 MuHd_075 : 25.338 10.622 8.643 3.454 MuHd_095 : 27.199 19.520 9.506 5.216 MuHd_100 : 22.355 15.465 6.926 4.024 MuHd_105 : 13.271 9.548 3.501 2.189 Hmax_075 : -0.100 -2.400 -1.866 1.170 Hmax_095 : 4.900 4.550 0.429 1.881 Hmax_100 : 1.600 2.800 -1.551 0.980 Hmax_105 : -2.800 0.500 -1.690 0.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9871 0.0129 DFMC : 0.9810 0.0190
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 366 PKNH_1109800 METTTKGGCNHVMQNDENKQEYLDFSDDFVFCSTCHNFSPYHKEGYLEKKCSNSWCGYSKRWFLLKNKKLYYFKSKESMR 80 PSGVLDLELIHMDINYEHGIKRKRSGEDCFLYCIESRMYKNGSKNESLLILTPRNTGLRFYLRGDDAEIYEWYNLLNSSM 160 KNNKITSQPNFIFSESNFWKIDRISVDVFESIADTGDIVLFRSKVVSAKLQRIITRGEYDHIGMILRNDKNGIFLLEALS 240 NMGIILTPWELFRKNRWNEAYTRIALRRLTWDNSEQNLKKLLDFLKNTIGKKYNLKIINFLASKSDDAGYFCSELIGECW 320 KIMGVIPTNTTCSYIWPSNFSEKFEEKMKLQEGCQLNNELCIDFTL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1109800 6 -METTTK|GG 0.062 . PKNH_1109800 19 MQNDENK|QE 0.063 . PKNH_1109800 43 NFSPYHK|EG 0.061 . PKNH_1109800 49 KEGYLEK|KC 0.065 . PKNH_1109800 50 EGYLEKK|CS 0.086 . PKNH_1109800 60 SWCGYSK|RW 0.059 . PKNH_1109800 61 WCGYSKR|WF 0.140 . PKNH_1109800 66 KRWFLLK|NK 0.060 . PKNH_1109800 68 WFLLKNK|KL 0.055 . PKNH_1109800 69 FLLKNKK|LY 0.072 . PKNH_1109800 74 KKLYYFK|SK 0.087 . PKNH_1109800 76 LYYFKSK|ES 0.062 . PKNH_1109800 80 KSKESMR|PS 0.105 . PKNH_1109800 101 NYEHGIK|RK 0.061 . PKNH_1109800 102 YEHGIKR|KR 0.166 . PKNH_1109800 103 EHGIKRK|RS 0.086 . PKNH_1109800 104 HGIKRKR|SG 0.322 . PKNH_1109800 117 LYCIESR|MY 0.084 . PKNH_1109800 120 IESRMYK|NG 0.200 . PKNH_1109800 124 MYKNGSK|NE 0.058 . PKNH_1109800 134 LLILTPR|NT 0.091 . PKNH_1109800 139 PRNTGLR|FY 0.104 . PKNH_1109800 143 GLRFYLR|GD 0.111 . PKNH_1109800 161 LLNSSMK|NN 0.060 . PKNH_1109800 164 SSMKNNK|IT 0.076 . PKNH_1109800 180 SESNFWK|ID 0.085 . PKNH_1109800 183 NFWKIDR|IS 0.095 . PKNH_1109800 202 GDIVLFR|SK 0.113 . PKNH_1109800 204 IVLFRSK|VV 0.075 . PKNH_1109800 209 SKVVSAK|LQ 0.075 . PKNH_1109800 212 VSAKLQR|II 0.127 . PKNH_1109800 216 LQRIITR|GE 0.130 . PKNH_1109800 227 HIGMILR|ND 0.083 . PKNH_1109800 230 MILRNDK|NG 0.087 . PKNH_1109800 253 TPWELFR|KN 0.104 . PKNH_1109800 254 PWELFRK|NR 0.067 . PKNH_1109800 256 ELFRKNR|WN 0.384 . PKNH_1109800 263 WNEAYTR|IA 0.089 . PKNH_1109800 267 YTRIALR|RL 0.077 . PKNH_1109800 268 TRIALRR|LT 0.187 . PKNH_1109800 279 NSEQNLK|KL 0.061 . PKNH_1109800 280 SEQNLKK|LL 0.105 . PKNH_1109800 286 KLLDFLK|NT 0.061 . PKNH_1109800 291 LKNTIGK|KY 0.066 . PKNH_1109800 292 KNTIGKK|YN 0.097 . PKNH_1109800 296 GKKYNLK|II 0.060 . PKNH_1109800 304 INFLASK|SD 0.083 . PKNH_1109800 321 LIGECWK|IM 0.070 . PKNH_1109800 343 PSNFSEK|FE 0.091 . PKNH_1109800 347 SEKFEEK|MK 0.071 . PKNH_1109800 349 KFEEKMK|LQ 0.064 . ____________________________^_________________

  • Fasta :-

    >PKNH_1109800 ATGGAAACAACGACGAAAGGTGGATGCAACCATGTCATGCAAAATGATGAAAATAAGCAG GAATATCTTGACTTTTCCGACGACTTTGTCTTCTGCTCGACTTGCCACAATTTCTCGCCG TACCACAAAGAGGGATACCTAGAAAAAAAATGTTCAAATTCCTGGTGCGGATATTCGAAA AGATGGTTCCTTCTGAAAAACAAAAAGTTATATTACTTCAAAAGCAAAGAAAGCATGAGG CCATCAGGCGTCCTCGATCTAGAACTCATCCACATGGACATTAACTACGAACACGGGATA AAAAGGAAACGAAGTGGCGAAGACTGCTTTCTGTACTGCATCGAATCGAGGATGTACAAA AACGGCAGCAAAAATGAGTCCCTCCTAATTCTAACCCCCAGGAATACAGGACTCAGATTT TATTTAAGGGGTGATGACGCGGAAATATACGAGTGGTATAACTTACTAAACAGCTCCATG AAGAATAATAAAATTACAAGTCAACCGAATTTTATTTTTTCGGAAAGTAATTTTTGGAAA ATCGACAGAATATCGGTTGATGTATTCGAGTCCATTGCAGACACTGGCGACATAGTCTTA TTCAGGTCAAAAGTGGTTTCCGCGAAGCTCCAGAGGATTATAACGAGGGGCGAATATGAT CACATCGGTATGATACTCAGGAATGACAAAAACGGCATTTTTCTCCTGGAGGCCTTATCC AACATGGGAATCATCCTAACGCCGTGGGAGCTTTTTAGAAAGAACCGATGGAACGAGGCC TACACCAGAATTGCTCTAAGACGCCTAACCTGGGACAACTCTGAACAAAATCTTAAAAAG TTGCTGGATTTTCTAAAAAACACCATAGGAAAAAAATATAACCTGAAGATTATTAATTTT CTGGCCTCCAAAAGTGATGATGCAGGCTATTTCTGCTCCGAATTAATAGGAGAATGCTGG AAGATAATGGGTGTCATTCCTACAAACACGACATGCTCTTATATCTGGCCGAGCAATTTT TCCGAAAAGTTCGAAGAGAAAATGAAGTTGCAGGAAGGTTGTCAGCTAAATAATGAGCTA TGCATAGACTTCACCCTGTAA
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  • Fasta :-

    METTTKGGCNHVMQNDENKQEYLDFSDDFVFCSTCHNFSPYHKEGYLEKKCSNSWCGYSK RWFLLKNKKLYYFKSKESMRPSGVLDLELIHMDINYEHGIKRKRSGEDCFLYCIESRMYK NGSKNESLLILTPRNTGLRFYLRGDDAEIYEWYNLLNSSMKNNKITSQPNFIFSESNFWK IDRISVDVFESIADTGDIVLFRSKVVSAKLQRIITRGEYDHIGMILRNDKNGIFLLEALS NMGIILTPWELFRKNRWNEAYTRIALRRLTWDNSEQNLKKLLDFLKNTIGKKYNLKIINF LASKSDDAGYFCSELIGECWKIMGVIPTNTTCSYIWPSNFSEKFEEKMKLQEGCQLNNEL CIDFTL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1109800207 SSKVVSAKLQ0.994unspPKNH_1109800207 SSKVVSAKLQ0.994unspPKNH_1109800207 SSKVVSAKLQ0.994unspPKNH_1109800303 SNFLASKSDD0.993unspPKNH_110980078 SKSKESMRPS0.992unspPKNH_1109800105 SKRKRSGEDC0.998unsp

PK13_6270c      PKH_110920      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India