PKNH_1121400 | protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1121400OTHER0.9999970.0000000.000002
No Results

  • Fasta :-

    >PKNH_1121400 MHYEELTNNYCEGGSKNIERISLSGCMRLMYCFFSITFLIIYSCATIGKNGIICLLLSFS PSCAYLYLFGRQIKRRIQIVHAVEMILYGAVLSVFLAGNLEYIFSLFFFHFCYICFVKDI RGILLLMCSVVVFFYFFLVVAYVEEVSKLLPMFFVQMNEKKSKNEYLELPLVDSMSFLNQ EGHEADHEEKEDTWVDKFRYIYANDILEYIYFSLCSSAGFSSTENLLYAAQATSQNFLSI IVLRNLICVLFHMSCSGVASYNIASRVNHKSRNGCVANLLSVLGCLFTSSLFHALYDYSI FFSSLSIPTYQASFLTLLFVYCFFCMLLIFSVLVGRSANAIRGGSLSRISGID
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1121400.fa Sequence name : PKNH_1121400 Sequence length : 353 VALUES OF COMPUTED PARAMETERS Coef20 : 2.843 CoefTot : -0.396 ChDiff : -2 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.712 2.941 0.622 0.942 MesoH : 1.179 1.703 0.161 0.621 MuHd_075 : 11.352 8.927 4.316 1.690 MuHd_095 : 35.230 18.427 12.212 6.377 MuHd_100 : 29.887 15.742 11.144 5.257 MuHd_105 : 21.733 11.046 8.307 3.540 Hmax_075 : -0.117 3.033 -0.446 1.820 Hmax_095 : 8.138 5.513 2.263 3.115 Hmax_100 : 1.900 1.100 0.094 2.670 Hmax_105 : -0.200 0.800 -1.364 1.750 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9900 0.0100 DFMC : 0.9838 0.0162
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 353 PKNH_1121400 MHYEELTNNYCEGGSKNIERISLSGCMRLMYCFFSITFLIIYSCATIGKNGIICLLLSFSPSCAYLYLFGRQIKRRIQIV 80 HAVEMILYGAVLSVFLAGNLEYIFSLFFFHFCYICFVKDIRGILLLMCSVVVFFYFFLVVAYVEEVSKLLPMFFVQMNEK 160 KSKNEYLELPLVDSMSFLNQEGHEADHEEKEDTWVDKFRYIYANDILEYIYFSLCSSAGFSSTENLLYAAQATSQNFLSI 240 IVLRNLICVLFHMSCSGVASYNIASRVNHKSRNGCVANLLSVLGCLFTSSLFHALYDYSIFFSSLSIPTYQASFLTLLFV 320 YCFFCMLLIFSVLVGRSANAIRGGSLSRISGID 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1121400 16 YCEGGSK|NI 0.061 . PKNH_1121400 20 GSKNIER|IS 0.096 . PKNH_1121400 28 SLSGCMR|LM 0.089 . PKNH_1121400 49 SCATIGK|NG 0.063 . PKNH_1121400 71 YLYLFGR|QI 0.087 . PKNH_1121400 74 LFGRQIK|RR 0.128 . PKNH_1121400 75 FGRQIKR|RI 0.154 . PKNH_1121400 76 GRQIKRR|IQ 0.184 . PKNH_1121400 118 CYICFVK|DI 0.081 . PKNH_1121400 121 CFVKDIR|GI 0.074 . PKNH_1121400 148 YVEEVSK|LL 0.059 . PKNH_1121400 160 FVQMNEK|KS 0.056 . PKNH_1121400 161 VQMNEKK|SK 0.154 . PKNH_1121400 163 MNEKKSK|NE 0.070 . PKNH_1121400 190 EADHEEK|ED 0.059 . PKNH_1121400 197 EDTWVDK|FR 0.069 . PKNH_1121400 199 TWVDKFR|YI 0.148 . PKNH_1121400 244 LSIIVLR|NL 0.126 . PKNH_1121400 266 SYNIASR|VN 0.106 . PKNH_1121400 270 ASRVNHK|SR 0.082 . PKNH_1121400 272 RVNHKSR|NG 0.105 . PKNH_1121400 336 FSVLVGR|SA 0.176 . PKNH_1121400 342 RSANAIR|GG 0.113 . PKNH_1121400 348 RGGSLSR|IS 0.090 . ____________________________^_________________

  • Fasta :-

    >PKNH_1121400 ATGCATTATGAGGAATTGACAAACAACTACTGCGAAGGAGGATCAAAAAATATAGAGAGG ATTTCCCTTTCGGGGTGTATGCGTCTGATGTACTGCTTTTTCTCGATAACATTTCTGATA ATTTATTCTTGTGCCACCATCGGAAAAAATGGAATCATCTGCTTACTTCTATCCTTTTCG CCGAGTTGTGCTTACCTATATCTGTTTGGAAGACAAATAAAAAGAAGAATACAAATTGTG CATGCTGTCGAAATGATATTGTACGGAGCTGTACTGTCCGTTTTTTTGGCGGGCAACTTA GAATATATCTTTTCTTTATTTTTTTTTCATTTCTGTTACATATGTTTTGTGAAAGACATC AGAGGGATTCTTCTTCTTATGTGTTCAGTGGTGGTATTTTTTTACTTCTTCCTGGTAGTG GCGTACGTGGAGGAAGTGTCTAAACTTCTTCCAATGTTTTTTGTTCAAATGAATGAGAAA AAAAGCAAAAATGAGTATCTAGAATTACCCCTCGTTGACAGCATGAGCTTCTTAAATCAA GAGGGACATGAAGCAGACCATGAAGAAAAGGAAGATACCTGGGTGGATAAATTCAGATAC ATTTATGCAAATGACATACTGGAATATATATATTTTTCCTTGTGCTCATCCGCCGGATTT TCGAGTACCGAAAACTTACTTTACGCTGCGCAGGCGACAAGCCAGAACTTCTTATCGATA ATTGTGTTAAGAAATTTGATCTGTGTGCTCTTCCACATGAGCTGTTCCGGAGTAGCTTCT TACAATATTGCCTCGCGAGTGAATCATAAAAGCAGGAACGGTTGTGTTGCAAATTTGCTG AGCGTCCTCGGATGTCTATTCACTTCTTCCCTCTTCCATGCATTGTATGACTACTCCATA TTTTTCAGTTCCTTAAGTATACCGACCTATCAAGCTTCCTTTTTGACCCTCCTGTTTGTG TATTGCTTCTTCTGCATGCTGCTCATATTTTCCGTTCTTGTGGGGCGCTCCGCGAATGCC ATACGGGGGGGTTCGCTCTCGCGCATAAGCGGAATTGACTAA
  • Download Fasta

  • Fasta :-

    MHYEELTNNYCEGGSKNIERISLSGCMRLMYCFFSITFLIIYSCATIGKNGIICLLLSFS PSCAYLYLFGRQIKRRIQIVHAVEMILYGAVLSVFLAGNLEYIFSLFFFHFCYICFVKDI RGILLLMCSVVVFFYFFLVVAYVEEVSKLLPMFFVQMNEKKSKNEYLELPLVDSMSFLNQ EGHEADHEEKEDTWVDKFRYIYANDILEYIYFSLCSSAGFSSTENLLYAAQATSQNFLSI IVLRNLICVLFHMSCSGVASYNIASRVNHKSRNGCVANLLSVLGCLFTSSLFHALYDYSI FFSSLSIPTYQASFLTLLFVYCFFCMLLIFSVLVGRSANAIRGGSLSRISGID

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1121400162 SNEKKSKNEY0.99unspPKNH_1121400350 SLSRISGID-0.997unsp

PK6_2585w      PKH_112090      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India