PKNH_1205300 | plasmepsin V, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_1205300SP0.0083630.9915280.000109CS pos: 34-35. TNC-KS. Pr: 0.6929
No Results

  • Fasta :-

    >PKNH_1205300 MGVISFGNRVCGSLSRMIFSVICILILCTLNTNCKSETVEGQKKDLLYKYKLYGDIDEYA YYFLDIGIGTPEQKISLILDTGSSSLSFPCAGCKKCGVHMENPFNLNNSKTSSILYCENE KCPYNLNCVNGKCEYLQSYCEGSQISGFYFSDVVTMTSYSNEKIIFRKLMGCHMHEESLF LYQQATGVLGMSLSKPQGIPTFINSLFENAPQLKEVFAICISEKGGELIAGGYDLAYIVS KEKEKNEEPKQASQGEPNKLNGDSPQGEDTKLAALSEAEQIVWENITRKYYYYIRLRGMD LFGTNMMSSSKGLEMLVDSGSTFTHIPEDLYNKLNFFFDILCIQDMNNSFDVNKRLKMKN ESFSNPLVEFEDFRKSLKSIIEKENMCVKIVEGVQCWKYLDGLPDLFVTLSNNYKMKWQP HSYLYKKENFWCKGIEKQVNNKPILGLTFFKNRQVIFDIQKNRIGFVDANCPYHSTNTRP RTYNEYKRKDNMFLKIPFFYLYSLFVFCALCILLSLVFYIKRLYHMEYNPLES
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1205300.fa Sequence name : PKNH_1205300 Sequence length : 533 VALUES OF COMPUTED PARAMETERS Coef20 : 4.575 CoefTot : 0.053 ChDiff : 1 ZoneTo : 36 KR : 3 DE : 0 CleavSite : 11 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.471 2.912 0.656 0.905 MesoH : -0.248 0.335 -0.313 0.272 MuHd_075 : 19.146 12.826 7.551 4.182 MuHd_095 : 36.344 31.193 10.588 10.576 MuHd_100 : 34.406 27.918 9.972 9.588 MuHd_105 : 32.969 25.042 9.168 8.519 Hmax_075 : 19.483 20.800 7.933 5.630 Hmax_095 : 19.512 22.838 5.600 7.367 Hmax_100 : 20.400 27.500 5.973 7.840 Hmax_105 : 18.800 21.233 5.345 7.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4741 0.5259 DFMC : 0.7369 0.2631
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 533 PKNH_1205300 MGVISFGNRVCGSLSRMIFSVICILILCTLNTNCKSETVEGQKKDLLYKYKLYGDIDEYAYYFLDIGIGTPEQKISLILD 80 TGSSSLSFPCAGCKKCGVHMENPFNLNNSKTSSILYCENEKCPYNLNCVNGKCEYLQSYCEGSQISGFYFSDVVTMTSYS 160 NEKIIFRKLMGCHMHEESLFLYQQATGVLGMSLSKPQGIPTFINSLFENAPQLKEVFAICISEKGGELIAGGYDLAYIVS 240 KEKEKNEEPKQASQGEPNKLNGDSPQGEDTKLAALSEAEQIVWENITRKYYYYIRLRGMDLFGTNMMSSSKGLEMLVDSG 320 STFTHIPEDLYNKLNFFFDILCIQDMNNSFDVNKRLKMKNESFSNPLVEFEDFRKSLKSIIEKENMCVKIVEGVQCWKYL 400 DGLPDLFVTLSNNYKMKWQPHSYLYKKENFWCKGIEKQVNNKPILGLTFFKNRQVIFDIQKNRIGFVDANCPYHSTNTRP 480 RTYNEYKRKDNMFLKIPFFYLYSLFVFCALCILLSLVFYIKRLYHMEYNPLES 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1205300 9 VISFGNR|VC 0.087 . PKNH_1205300 16 VCGSLSR|MI 0.092 . PKNH_1205300 35 TLNTNCK|SE 0.080 . PKNH_1205300 43 ETVEGQK|KD 0.050 . PKNH_1205300 44 TVEGQKK|DL 0.105 . PKNH_1205300 49 KKDLLYK|YK 0.062 . PKNH_1205300 51 DLLYKYK|LY 0.080 . PKNH_1205300 74 IGTPEQK|IS 0.056 . PKNH_1205300 94 FPCAGCK|KC 0.068 . PKNH_1205300 95 PCAGCKK|CG 0.088 . PKNH_1205300 110 FNLNNSK|TS 0.059 . PKNH_1205300 121 LYCENEK|CP 0.053 . PKNH_1205300 132 LNCVNGK|CE 0.062 . PKNH_1205300 163 TSYSNEK|II 0.076 . PKNH_1205300 167 NEKIIFR|KL 0.091 . PKNH_1205300 168 EKIIFRK|LM 0.101 . PKNH_1205300 195 LGMSLSK|PQ 0.059 . PKNH_1205300 214 ENAPQLK|EV 0.089 . PKNH_1205300 224 AICISEK|GG 0.068 . PKNH_1205300 241 LAYIVSK|EK 0.073 . PKNH_1205300 243 YIVSKEK|EK 0.061 . PKNH_1205300 245 VSKEKEK|NE 0.070 . PKNH_1205300 250 EKNEEPK|QA 0.157 . PKNH_1205300 259 SQGEPNK|LN 0.077 . PKNH_1205300 271 PQGEDTK|LA 0.064 . PKNH_1205300 288 VWENITR|KY 0.076 . PKNH_1205300 289 WENITRK|YY 0.099 . PKNH_1205300 295 KYYYYIR|LR 0.083 . PKNH_1205300 297 YYYIRLR|GM 0.080 . PKNH_1205300 311 NMMSSSK|GL 0.072 . PKNH_1205300 333 PEDLYNK|LN 0.051 . PKNH_1205300 354 NSFDVNK|RL 0.065 . PKNH_1205300 355 SFDVNKR|LK 0.187 . PKNH_1205300 357 DVNKRLK|MK 0.067 . PKNH_1205300 359 NKRLKMK|NE 0.072 . PKNH_1205300 374 VEFEDFR|KS 0.072 . PKNH_1205300 375 EFEDFRK|SL 0.101 . PKNH_1205300 378 DFRKSLK|SI 0.103 . PKNH_1205300 383 LKSIIEK|EN 0.068 . PKNH_1205300 389 KENMCVK|IV 0.102 . PKNH_1205300 398 EGVQCWK|YL 0.068 . PKNH_1205300 415 TLSNNYK|MK 0.072 . PKNH_1205300 417 SNNYKMK|WQ 0.078 . PKNH_1205300 426 PHSYLYK|KE 0.064 . PKNH_1205300 427 HSYLYKK|EN 0.101 . PKNH_1205300 433 KENFWCK|GI 0.106 . PKNH_1205300 437 WCKGIEK|QV 0.070 . PKNH_1205300 442 EKQVNNK|PI 0.061 . PKNH_1205300 451 LGLTFFK|NR 0.060 . PKNH_1205300 453 LTFFKNR|QV 0.104 . PKNH_1205300 461 VIFDIQK|NR 0.054 . PKNH_1205300 463 FDIQKNR|IG 0.081 . PKNH_1205300 479 YHSTNTR|PR 0.086 . PKNH_1205300 481 STNTRPR|TY 0.097 . PKNH_1205300 487 RTYNEYK|RK 0.065 . PKNH_1205300 488 TYNEYKR|KD 0.163 . PKNH_1205300 489 YNEYKRK|DN 0.094 . PKNH_1205300 495 KDNMFLK|IP 0.068 . PKNH_1205300 521 SLVFYIK|RL 0.065 . PKNH_1205300 522 LVFYIKR|LY 0.126 . ____________________________^_________________

  • Fasta :-

    >PKNH_1205300 ATGGGTGTAATCAGCTTTGGGAATCGCGTTTGCGGTTCCCTTTCTCGAATGATATTTTCA GTCATTTGCATTTTAATCCTATGTACGTTGAATACAAATTGCAAAAGCGAGACAGTAGAA GGCCAGAAGAAAGACCTACTGTATAAGTACAAGCTATATGGAGACATAGACGAGTATGCC TACTATTTCCTGGACATAGGAATTGGTACCCCGGAGCAGAAAATTTCCTTAATCCTAGAC ACGGGTTCATCCTCTTTGAGTTTTCCATGCGCTGGATGTAAGAAATGTGGGGTTCACATG GAAAATCCCTTTAACCTAAATAATTCTAAAACATCATCCATTCTCTATTGTGAAAATGAG AAGTGTCCTTATAACCTGAATTGTGTTAATGGGAAATGTGAGTACCTGCAGTCCTACTGT GAGGGTTCACAAATCAGTGGATTTTACTTCTCAGATGTAGTTACCATGACGTCGTACAGC AATGAAAAGATAATTTTTAGGAAGCTTATGGGGTGTCATATGCATGAGGAGAGTCTCTTT CTATATCAGCAGGCGACTGGGGTTTTAGGGATGAGTCTTTCCAAGCCGCAAGGCATACCC ACGTTTATCAATTCTCTGTTTGAGAATGCCCCGCAACTGAAGGAGGTGTTCGCCATTTGT ATCTCCGAAAAGGGTGGAGAACTCATCGCGGGGGGGTATGATCTGGCCTACATCGTGAGT AAAGAGAAGGAGAAGAATGAGGAACCGAAGCAAGCCTCGCAAGGTGAACCTAATAAACTG AACGGGGATTCTCCACAGGGGGAAGACACAAAATTGGCGGCATTGAGCGAAGCAGAACAA ATTGTATGGGAAAATATAACAAGGAAGTACTACTACTACATAAGGCTGAGGGGCATGGAC CTATTTGGAACAAACATGATGAGCTCAAGCAAGGGGCTAGAAATGCTTGTAGATTCAGGG AGTACATTCACACACATTCCAGAGGATCTATACAACAAATTGAATTTCTTCTTCGATATC CTGTGCATTCAAGATATGAATAATTCCTTTGATGTGAATAAGAGGTTGAAAATGAAAAAC GAATCTTTTAGTAATCCTTTAGTTGAATTTGAGGATTTCAGGAAATCCCTGAAAAGTATC ATCGAGAAGGAGAACATGTGTGTTAAAATAGTAGAAGGAGTGCAGTGTTGGAAGTACCTG GATGGGCTACCCGATCTGTTTGTAACTCTATCTAATAATTACAAAATGAAGTGGCAACCA CATTCGTATCTCTACAAGAAGGAAAACTTTTGGTGTAAGGGCATAGAGAAACAGGTAAAT AATAAGCCCATATTGGGATTAACCTTTTTTAAAAACAGACAAGTTATTTTTGACATTCAG AAGAATCGGATCGGGTTTGTCGATGCCAATTGTCCTTATCATTCGACCAATACGAGACCT AGGACTTATAATGAATACAAAAGGAAGGACAACATGTTTTTAAAAATTCCTTTTTTCTAC CTGTACAGCCTCTTTGTCTTCTGCGCCCTTTGTATTTTACTATCCCTTGTGTTTTACATT AAGCGGCTTTACCATATGGAGTACAACCCGCTCGAGTCGTAG
  • Download Fasta

  • Fasta :-

    MGVISFGNRVCGSLSRMIFSVICILILCTLNTNCKSETVEGQKKDLLYKYKLYGDIDEYA YYFLDIGIGTPEQKISLILDTGSSSLSFPCAGCKKCGVHMENPFNLNNSKTSSILYCENE KCPYNLNCVNGKCEYLQSYCEGSQISGFYFSDVVTMTSYSNEKIIFRKLMGCHMHEESLF LYQQATGVLGMSLSKPQGIPTFINSLFENAPQLKEVFAICISEKGGELIAGGYDLAYIVS KEKEKNEEPKQASQGEPNKLNGDSPQGEDTKLAALSEAEQIVWENITRKYYYYIRLRGMD LFGTNMMSSSKGLEMLVDSGSTFTHIPEDLYNKLNFFFDILCIQDMNNSFDVNKRLKMKN ESFSNPLVEFEDFRKSLKSIIEKENMCVKIVEGVQCWKYLDGLPDLFVTLSNNYKMKWQP HSYLYKKENFWCKGIEKQVNNKPILGLTFFKNRQVIFDIQKNRIGFVDANCPYHSTNTRP RTYNEYKRKDNMFLKIPFFYLYSLFVFCALCILLSLVFYIKRLYHMEYNPLES

  • title: catalytic residue
  • coordinates: D80,D318
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1205300376 SDFRKSLKSI0.996unspPKNH_1205300379 SKSLKSIIEK0.996unsp

PK13_2390w      PKH_122960      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India