PKNH_1215800 | plasmepsin VIII, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1215800SP0.0196780.9789070.001416CS pos: 21-22. VKS-AK. Pr: 0.9253
No Results

  • Fasta :-

    >PKNH_1215800 MNFLLSIFVFIIFNIHPWVKSAKENLRISRYNRPGISTIILKGDYINRQFIGEIYIGSPP QVFKVLFDTGSTNLWIPSKNCQTKGCRSKRKYDHRVSKNYKSVEKKNPVEVFFGTGKIQI AYVSDDVHLGDITVKNQEFGVASYISDDPFSDMKFDGLFGLGISDDKKRKTLIYENIPKG RSKKNVFSIYYPKNVDDDGAITFGGYDQKFIQPNENINWFDVSSRKYWTVKMIGLKINGV FLDVCSKNIGGYCEAVIDTGTSSIAGPKEDLILLTRLLNPRRTCHNRALLKRFSFLLSDE NGEQKEYELTPEDYIVNSFRVDPALKTPCNFAFMPINISSANRYLYILGQIFLQKYYAIF EKDKMKIGLAKSV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1215800.fa Sequence name : PKNH_1215800 Sequence length : 373 VALUES OF COMPUTED PARAMETERS Coef20 : 4.354 CoefTot : -1.028 ChDiff : 14 ZoneTo : 43 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.912 2.071 0.156 0.845 MesoH : -0.720 0.283 -0.413 0.209 MuHd_075 : 20.344 14.810 6.625 5.469 MuHd_095 : 30.729 21.446 8.280 7.150 MuHd_100 : 39.062 23.989 9.660 7.873 MuHd_105 : 47.963 26.443 12.094 10.221 Hmax_075 : -2.917 7.700 -0.478 2.497 Hmax_095 : 2.500 27.650 -1.161 5.780 Hmax_100 : 7.800 22.400 3.649 3.860 Hmax_105 : 8.983 18.200 0.554 4.247 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6027 0.3973 DFMC : 0.7327 0.2673
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 373 PKNH_1215800 MNFLLSIFVFIIFNIHPWVKSAKENLRISRYNRPGISTIILKGDYINRQFIGEIYIGSPPQVFKVLFDTGSTNLWIPSKN 80 CQTKGCRSKRKYDHRVSKNYKSVEKKNPVEVFFGTGKIQIAYVSDDVHLGDITVKNQEFGVASYISDDPFSDMKFDGLFG 160 LGISDDKKRKTLIYENIPKGRSKKNVFSIYYPKNVDDDGAITFGGYDQKFIQPNENINWFDVSSRKYWTVKMIGLKINGV 240 FLDVCSKNIGGYCEAVIDTGTSSIAGPKEDLILLTRLLNPRRTCHNRALLKRFSFLLSDENGEQKEYELTPEDYIVNSFR 320 VDPALKTPCNFAFMPINISSANRYLYILGQIFLQKYYAIFEKDKMKIGLAKSV 400 ................................................................................ 80 .........P...................................................................... 160 .......................P........................................................ 240 ................................................................................ 320 ..................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ PKNH_1215800 20 NIHPWVK|SA 0.102 . PKNH_1215800 23 PWVKSAK|EN 0.065 . PKNH_1215800 27 SAKENLR|IS 0.089 . PKNH_1215800 30 ENLRISR|YN 0.306 . PKNH_1215800 33 RISRYNR|PG 0.215 . PKNH_1215800 42 ISTIILK|GD 0.061 . PKNH_1215800 48 KGDYINR|QF 0.085 . PKNH_1215800 64 SPPQVFK|VL 0.079 . PKNH_1215800 79 NLWIPSK|NC 0.064 . PKNH_1215800 84 SKNCQTK|GC 0.087 . PKNH_1215800 87 CQTKGCR|SK 0.106 . PKNH_1215800 89 TKGCRSK|RK 0.072 . PKNH_1215800 90 KGCRSKR|KY 0.592 *ProP* PKNH_1215800 91 GCRSKRK|YD 0.116 . PKNH_1215800 95 KRKYDHR|VS 0.091 . PKNH_1215800 98 YDHRVSK|NY 0.168 . PKNH_1215800 101 RVSKNYK|SV 0.222 . PKNH_1215800 105 NYKSVEK|KN 0.059 . PKNH_1215800 106 YKSVEKK|NP 0.132 . PKNH_1215800 117 VFFGTGK|IQ 0.058 . PKNH_1215800 135 LGDITVK|NQ 0.063 . PKNH_1215800 154 DPFSDMK|FD 0.068 . PKNH_1215800 167 LGISDDK|KR 0.053 . PKNH_1215800 168 GISDDKK|RK 0.090 . PKNH_1215800 169 ISDDKKR|KT 0.223 . PKNH_1215800 170 SDDKKRK|TL 0.086 . PKNH_1215800 179 IYENIPK|GR 0.066 . PKNH_1215800 181 ENIPKGR|SK 0.166 . PKNH_1215800 183 IPKGRSK|KN 0.064 . PKNH_1215800 184 PKGRSKK|NV 0.517 *ProP* PKNH_1215800 193 FSIYYPK|NV 0.083 . PKNH_1215800 209 FGGYDQK|FI 0.076 . PKNH_1215800 225 WFDVSSR|KY 0.091 . PKNH_1215800 226 FDVSSRK|YW 0.095 . PKNH_1215800 231 RKYWTVK|MI 0.096 . PKNH_1215800 236 VKMIGLK|IN 0.068 . PKNH_1215800 247 FLDVCSK|NI 0.063 . PKNH_1215800 268 SSIAGPK|ED 0.060 . PKNH_1215800 276 DLILLTR|LL 0.074 . PKNH_1215800 281 TRLLNPR|RT 0.092 . PKNH_1215800 282 RLLNPRR|TC 0.091 . PKNH_1215800 287 RRTCHNR|AL 0.109 . PKNH_1215800 291 HNRALLK|RF 0.066 . PKNH_1215800 292 NRALLKR|FS 0.173 . PKNH_1215800 305 DENGEQK|EY 0.064 . PKNH_1215800 320 YIVNSFR|VD 0.074 . PKNH_1215800 326 RVDPALK|TP 0.054 . PKNH_1215800 343 NISSANR|YL 0.118 . PKNH_1215800 355 GQIFLQK|YY 0.073 . PKNH_1215800 362 YYAIFEK|DK 0.082 . PKNH_1215800 364 AIFEKDK|MK 0.064 . PKNH_1215800 366 FEKDKMK|IG 0.062 . PKNH_1215800 371 MKIGLAK|SV 0.146 . ____________________________^_________________

  • Fasta :-

    >PKNH_1215800 ATGAACTTCCTATTGTCCATTTTTGTCTTTATCATTTTTAATATTCACCCTTGGGTGAAA TCTGCAAAAGAGAATTTAAGAATATCCAGGTATAACAGGCCAGGAATTTCCACCATCATT CTCAAGGGCGATTACATCAACAGACAATTCATTGGAGAAATATACATTGGAAGTCCCCCC CAGGTGTTCAAGGTTCTATTTGATACTGGCAGTACAAACTTGTGGATCCCGTCGAAAAAC TGCCAAACGAAGGGCTGTCGGAGCAAAAGAAAATACGATCACAGAGTTTCTAAAAATTAC AAATCAGTCGAGAAAAAGAACCCTGTGGAAGTTTTCTTCGGAACAGGCAAAATACAAATC GCTTACGTTTCTGATGATGTTCACTTAGGAGATATTACGGTAAAAAACCAGGAGTTTGGA GTAGCCAGTTATATATCCGATGATCCTTTTTCAGATATGAAATTCGATGGCCTATTCGGC CTAGGCATTTCAGATGATAAAAAGAGAAAAACATTGATTTATGAGAACATACCAAAAGGT CGGTCAAAAAAAAACGTCTTCTCGATTTATTACCCCAAGAATGTGGACGACGATGGTGCG ATAACCTTCGGGGGATACGATCAAAAATTTATCCAACCCAATGAGAATATCAATTGGTTT GACGTTTCGTCCAGAAAATACTGGACAGTCAAAATGATAGGACTGAAAATCAATGGAGTA TTCCTAGACGTGTGTTCCAAAAATATAGGTGGCTACTGCGAAGCAGTCATTGATACAGGA ACGTCAAGCATCGCTGGCCCCAAGGAAGACTTAATTTTATTAACTAGATTGTTAAACCCT AGAAGAACCTGCCACAACAGGGCACTACTAAAAAGATTTTCTTTCCTTCTAAGTGACGAA AATGGCGAACAAAAGGAGTACGAATTAACCCCGGAGGATTACATAGTTAACTCGTTCAGA GTCGACCCTGCTTTGAAGACCCCTTGCAACTTCGCGTTCATGCCAATTAACATTTCTTCG GCTAATAGATATTTATATATTCTTGGACAAATATTTTTGCAAAAGTATTATGCAATATTT GAAAAGGACAAAATGAAAATTGGCCTAGCTAAATCGGTGTGA
  • Download Fasta

  • Fasta :-

    MNFLLSIFVFIIFNIHPWVKSAKENLRISRYNRPGISTIILKGDYINRQFIGEIYIGSPP QVFKVLFDTGSTNLWIPSKNCQTKGCRSKRKYDHRVSKNYKSVEKKNPVEVFFGTGKIQI AYVSDDVHLGDITVKNQEFGVASYISDDPFSDMKFDGLFGLGISDDKKRKTLIYENIPKG RSKKNVFSIYYPKNVDDDGAITFGGYDQKFIQPNENINWFDVSSRKYWTVKMIGLKINGV FLDVCSKNIGGYCEAVIDTGTSSIAGPKEDLILLTRLLNPRRTCHNRALLKRFSFLLSDE NGEQKEYELTPEDYIVNSFRVDPALKTPCNFAFMPINISSANRYLYILGQIFLQKYYAIF EKDKMKIGLAKSV

  • title: catalytic residue
  • coordinates: D68,D258
No Results
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PK14_2995c      PKH_123990      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India