PKNH_1224800 | signal peptide peptidase, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1224800OTHER0.9999200.0000010.000079
No Results

  • Fasta :-

    >PKNH_1224800 MNLLKLISKNNKKMKSDSMGYSIFYYSSYVIILLTIVLSKFFVIPLMVQMFLYTFITIYI GSHDSLKQLEQVEDKNKKADNITAYDAIMFPIIGSGALLTLYFAYKFLDPYYVNMLLTVY LTLAGIFSLQGACANILEPAFPKFFKKDEYVKTFKLPGFISKEPVVFNTNKGEIISFLVC FFIGGRWIFYKDFITHNVLAVSFCFQAISLVILSNFLIGFLLLSGLFVYDIFWVFGNDVM VTVAKSFEAPVKLLFPVSTDPVHYSMLGLGDIIIPGIVISLCLRFDYYLHRNKIHKGNFK KMFNDISIHESFKKYYFYTITVFYQLGLVVTYCMLFYFEHAQPALLYLVPACILAIVGCS LFKGEFKMMVKYQEITDKSSASDDGKKKVADKDEMFKSQESIISNAKKRITNK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1224800.fa Sequence name : PKNH_1224800 Sequence length : 413 VALUES OF COMPUTED PARAMETERS Coef20 : 3.772 CoefTot : -1.535 ChDiff : 11 ZoneTo : 63 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.118 2.612 0.579 0.844 MesoH : 1.003 1.499 0.061 0.597 MuHd_075 : 27.252 25.581 7.450 7.183 MuHd_095 : 34.357 20.070 9.303 7.022 MuHd_100 : 30.473 18.914 9.320 6.844 MuHd_105 : 28.244 19.142 8.890 7.025 Hmax_075 : 17.267 26.367 4.830 8.633 Hmax_095 : 2.188 6.737 -2.287 2.117 Hmax_100 : 3.100 6.200 -1.742 2.500 Hmax_105 : 9.100 8.167 -0.360 2.987 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5749 0.4251 DFMC : 0.5137 0.4863
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 413 PKNH_1224800 MNLLKLISKNNKKMKSDSMGYSIFYYSSYVIILLTIVLSKFFVIPLMVQMFLYTFITIYIGSHDSLKQLEQVEDKNKKAD 80 NITAYDAIMFPIIGSGALLTLYFAYKFLDPYYVNMLLTVYLTLAGIFSLQGACANILEPAFPKFFKKDEYVKTFKLPGFI 160 SKEPVVFNTNKGEIISFLVCFFIGGRWIFYKDFITHNVLAVSFCFQAISLVILSNFLIGFLLLSGLFVYDIFWVFGNDVM 240 VTVAKSFEAPVKLLFPVSTDPVHYSMLGLGDIIIPGIVISLCLRFDYYLHRNKIHKGNFKKMFNDISIHESFKKYYFYTI 320 TVFYQLGLVVTYCMLFYFEHAQPALLYLVPACILAIVGCSLFKGEFKMMVKYQEITDKSSASDDGKKKVADKDEMFKSQE 400 SIISNAKKRITNK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1224800 5 --MNLLK|LI 0.069 . PKNH_1224800 9 LLKLISK|NN 0.059 . PKNH_1224800 12 LISKNNK|KM 0.062 . PKNH_1224800 13 ISKNNKK|MK 0.134 . PKNH_1224800 15 KNNKKMK|SD 0.173 . PKNH_1224800 40 LTIVLSK|FF 0.062 . PKNH_1224800 67 GSHDSLK|QL 0.097 . PKNH_1224800 75 LEQVEDK|NK 0.061 . PKNH_1224800 77 QVEDKNK|KA 0.068 . PKNH_1224800 78 VEDKNKK|AD 0.081 . PKNH_1224800 106 TLYFAYK|FL 0.086 . PKNH_1224800 143 LEPAFPK|FF 0.068 . PKNH_1224800 146 AFPKFFK|KD 0.065 . PKNH_1224800 147 FPKFFKK|DE 0.137 . PKNH_1224800 152 KKDEYVK|TF 0.054 . PKNH_1224800 155 EYVKTFK|LP 0.059 . PKNH_1224800 162 LPGFISK|EP 0.060 . PKNH_1224800 171 VVFNTNK|GE 0.064 . PKNH_1224800 186 CFFIGGR|WI 0.076 . PKNH_1224800 191 GRWIFYK|DF 0.094 . PKNH_1224800 245 VMVTVAK|SF 0.090 . PKNH_1224800 252 SFEAPVK|LL 0.069 . PKNH_1224800 284 VISLCLR|FD 0.077 . PKNH_1224800 291 FDYYLHR|NK 0.086 . PKNH_1224800 293 YYLHRNK|IH 0.055 . PKNH_1224800 296 HRNKIHK|GN 0.102 . PKNH_1224800 300 IHKGNFK|KM 0.063 . PKNH_1224800 301 HKGNFKK|MF 0.133 . PKNH_1224800 313 SIHESFK|KY 0.066 . PKNH_1224800 314 IHESFKK|YY 0.116 . PKNH_1224800 363 VGCSLFK|GE 0.061 . PKNH_1224800 367 LFKGEFK|MM 0.062 . PKNH_1224800 371 EFKMMVK|YQ 0.062 . PKNH_1224800 378 YQEITDK|SS 0.071 . PKNH_1224800 386 SASDDGK|KK 0.068 . PKNH_1224800 387 ASDDGKK|KV 0.134 . PKNH_1224800 388 SDDGKKK|VA 0.148 . PKNH_1224800 392 KKKVADK|DE 0.068 . PKNH_1224800 397 DKDEMFK|SQ 0.077 . PKNH_1224800 407 SIISNAK|KR 0.059 . PKNH_1224800 408 IISNAKK|RI 0.142 . PKNH_1224800 409 ISNAKKR|IT 0.341 . PKNH_1224800 413 KKRITNK|-- 0.074 . ____________________________^_________________

  • Fasta :-

    >PKNH_1224800 ATGAATTTACTAAAGCTGATTAGTAAAAATAATAAAAAAATGAAGAGCGACAGTATGGGA TATTCCATATTTTATTATTCGAGCTATGTTATAATACTGCTGACCATCGTGCTCTCGAAG TTTTTTGTGATTCCTTTGATGGTTCAAATGTTTCTGTACACATTTATAACGATATATATC GGGAGCCATGATAGTTTGAAGCAATTAGAGCAAGTTGAAGATAAAAATAAGAAGGCCGAT AATATTACAGCCTACGATGCAATTATGTTCCCCATTATCGGCTCTGGAGCCTTGTTGACG CTGTATTTTGCGTACAAGTTTTTAGACCCATACTATGTGAATATGCTTCTGACGGTTTAC CTAACCCTAGCAGGAATTTTCTCTCTACAAGGGGCTTGTGCTAACATTTTGGAACCTGCT TTTCCTAAATTTTTCAAAAAGGACGAATATGTTAAGACGTTTAAATTGCCCGGATTCATT TCGAAGGAGCCCGTCGTTTTCAACACAAACAAGGGAGAAATAATCAGCTTCCTGGTGTGC TTCTTCATCGGTGGGCGATGGATTTTTTATAAAGACTTTATCACCCACAATGTGTTAGCC GTGTCCTTTTGTTTCCAAGCCATATCGCTAGTCATCCTGAGCAACTTTTTAATTGGGTTC CTCCTACTTTCTGGACTTTTCGTGTATGACATATTTTGGGTCTTTGGAAACGACGTTATG GTGACCGTTGCGAAGTCATTCGAAGCACCAGTAAAACTCCTTTTTCCAGTATCGACAGAC CCAGTACATTACAGCATGCTAGGTTTAGGGGATATCATCATCCCCGGTATTGTAATATCA CTGTGTCTACGTTTTGACTATTACCTACACAGAAATAAAATACACAAAGGGAATTTCAAA AAAATGTTTAACGACATATCAATTCATGAGTCCTTTAAGAAATATTATTTCTATACCATT ACGGTTTTCTACCAATTAGGATTGGTAGTAACATATTGTATGCTCTTTTATTTCGAGCAT GCACAACCTGCTTTGTTGTACCTCGTGCCTGCCTGCATATTGGCAATAGTAGGTTGCTCC CTATTCAAAGGGGAATTTAAAATGATGGTAAAGTACCAGGAAATTACGGATAAGAGTTCT GCTTCCGATGATGGGAAGAAGAAAGTCGCTGATAAGGATGAAATGTTCAAGAGCCAAGAG TCCATCATATCTAACGCGAAGAAAAGAATTACGAATAAGTAG
  • Download Fasta

  • Fasta :-

    MNLLKLISKNNKKMKSDSMGYSIFYYSSYVIILLTIVLSKFFVIPLMVQMFLYTFITIYI GSHDSLKQLEQVEDKNKKADNITAYDAIMFPIIGSGALLTLYFAYKFLDPYYVNMLLTVY LTLAGIFSLQGACANILEPAFPKFFKKDEYVKTFKLPGFISKEPVVFNTNKGEIISFLVC FFIGGRWIFYKDFITHNVLAVSFCFQAISLVILSNFLIGFLLLSGLFVYDIFWVFGNDVM VTVAKSFEAPVKLLFPVSTDPVHYSMLGLGDIIIPGIVISLCLRFDYYLHRNKIHKGNFK KMFNDISIHESFKKYYFYTITVFYQLGLVVTYCMLFYFEHAQPALLYLVPACILAIVGCS LFKGEFKMMVKYQEITDKSSASDDGKKKVADKDEMFKSQESIISNAKKRITNK

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethod
PKNH_1224800380 STDKSSASDD0.996unsp

PK14_2580c      PKH_124910      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India