PKNH_1251200 | peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_1251200OTHER0.9999940.0000020.000003
No Results

  • Fasta :-

    >PKNH_1251200 MNFDFTLETCCERNQNITFISISACVLINAMFWKCKILEPFKLLTVFLHEFSHASACWLT GGRVKSIEVNRNHGGCTNTIGGNQFLILPAGYIGSCFYGTFFILMAYINKWTLITSAAFL CFLLLIVLIFYANNFFLRLLCVLFLALTISIWVLCVHFQEDVQYWPLKIIMTFIGVLNQI YSMVDIIEDLITRTVPESDAYKYAEMTKCNSKFCGALWFVVNLVFIFSTVYLIGAIHVKN FDH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1251200.fa Sequence name : PKNH_1251200 Sequence length : 243 VALUES OF COMPUTED PARAMETERS Coef20 : 4.082 CoefTot : -0.134 ChDiff : 0 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.588 2.982 0.615 0.924 MesoH : 1.541 1.806 0.240 0.666 MuHd_075 : 25.043 9.638 6.822 3.102 MuHd_095 : 23.831 11.663 7.970 2.742 MuHd_100 : 20.371 15.024 8.266 3.364 MuHd_105 : 15.081 16.692 7.565 3.530 Hmax_075 : 9.567 6.417 2.658 1.773 Hmax_095 : 3.850 4.550 0.777 2.039 Hmax_100 : 10.000 11.900 3.562 3.450 Hmax_105 : 0.583 9.800 1.342 2.695 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9773 0.0227 DFMC : 0.9485 0.0515
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 243 PKNH_1251200 MNFDFTLETCCERNQNITFISISACVLINAMFWKCKILEPFKLLTVFLHEFSHASACWLTGGRVKSIEVNRNHGGCTNTI 80 GGNQFLILPAGYIGSCFYGTFFILMAYINKWTLITSAAFLCFLLLIVLIFYANNFFLRLLCVLFLALTISIWVLCVHFQE 160 DVQYWPLKIIMTFIGVLNQIYSMVDIIEDLITRTVPESDAYKYAEMTKCNSKFCGALWFVVNLVFIFSTVYLIGAIHVKN 240 FDH 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1251200 13 LETCCER|NQ 0.070 . PKNH_1251200 34 INAMFWK|CK 0.073 . PKNH_1251200 36 AMFWKCK|IL 0.071 . PKNH_1251200 42 KILEPFK|LL 0.061 . PKNH_1251200 63 CWLTGGR|VK 0.068 . PKNH_1251200 65 LTGGRVK|SI 0.100 . PKNH_1251200 71 KSIEVNR|NH 0.116 . PKNH_1251200 110 LMAYINK|WT 0.059 . PKNH_1251200 138 ANNFFLR|LL 0.099 . PKNH_1251200 168 VQYWPLK|II 0.075 . PKNH_1251200 193 IEDLITR|TV 0.080 . PKNH_1251200 202 PESDAYK|YA 0.081 . PKNH_1251200 208 KYAEMTK|CN 0.068 . PKNH_1251200 212 MTKCNSK|FC 0.074 . PKNH_1251200 239 IGAIHVK|NF 0.072 . ____________________________^_________________

  • Fasta :-

    >PKNH_1251200 ATGAATTTCGACTTCACCCTGGAGACTTGCTGCGAGAGAAACCAAAACATCACCTTCATC AGCATTTCCGCGTGCGTGCTGATAAACGCCATGTTTTGGAAGTGCAAAATTTTGGAGCCC TTCAAACTGTTGACTGTTTTTTTGCACGAGTTTTCGCATGCGTCAGCCTGTTGGTTGACG GGGGGGCGAGTGAAGAGCATAGAGGTGAACAGAAACCATGGAGGATGCACAAACACAATT GGAGGAAACCAATTCCTAATTTTGCCCGCTGGCTACATTGGTTCCTGTTTCTACGGGACG TTTTTTATTTTGATGGCATACATAAACAAGTGGACGCTGATCACATCGGCCGCCTTCTTA TGTTTCTTACTCTTAATAGTGTTAATTTTTTATGCGAATAATTTTTTTCTAAGGCTTCTT TGCGTCCTCTTCTTAGCGCTTACCATTTCAATTTGGGTTTTGTGTGTGCATTTTCAGGAA GACGTGCAGTACTGGCCCCTAAAAATAATCATGACCTTCATAGGCGTCCTCAACCAAATA TATAGCATGGTAGACATAATTGAAGACTTAATTACGAGAACTGTCCCTGAGTCCGATGCG TATAAATATGCAGAAATGACCAAATGTAACTCCAAGTTTTGTGGAGCCCTATGGTTTGTT GTCAATTTGGTTTTTATATTTTCGACCGTTTATTTGATCGGCGCAATTCATGTAAAGAAC TTTGACCACTGA
  • Download Fasta

  • Fasta :-

    MNFDFTLETCCERNQNITFISISACVLINAMFWKCKILEPFKLLTVFLHEFSHASACWLT GGRVKSIEVNRNHGGCTNTIGGNQFLILPAGYIGSCFYGTFFILMAYINKWTLITSAAFL CFLLLIVLIFYANNFFLRLLCVLFLALTISIWVLCVHFQEDVQYWPLKIIMTFIGVLNQI YSMVDIIEDLITRTVPESDAYKYAEMTKCNSKFCGALWFVVNLVFIFSTVYLIGAIHVKN FDH

    No Results
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IDSitePeptideScoreMethod
PKNH_125120066 SGRVKSIEVN0.993unsp

PK13_4950w      PKH_120420      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India