PKNH_1262900 | SprT-like domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_1262900OTHER0.9999880.0000020.000009
No Results

  • Fasta :-

    >PKNH_1262900 MNDGLNKLTSVESEYLEKSGKKRRQKSLTLNDDVSTQQDANFERICLSTLQGEIEQNKEI ALPDIYVSDRKTGQGVHPSCVNLSESYPLDAEVEEEDFETLEVIKQLSSIRIDSDTDNSV GGDKVVCNKKENTPKKRNKKKRGKHTITPLWDNTDVECVEDAIIYDESKDTDFPDLLQLF EEYNEKYFFNKLKSVQVKWSNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYRETLL HEMIHAFLFLTRSNSRHDGHGPEFKKHMYRINKATGLCITIYHSFHKEVNFYRNHVWRCT GVCRTYPPHFGYVKRSMNRPPGPKEKWWRRHSSYCRGNFIKMEKGKEDKNSDTVHFGATG YNSGILGKAMESTRVKNKKTSGKDGFEKRADTVNTELLNDAIVILDSKKQIMEKQKEVDE MDIINLIKTLFSDNKQKVWSFPDLSVDYHKAFKNENYFEID
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1262900.fa Sequence name : PKNH_1262900 Sequence length : 461 VALUES OF COMPUTED PARAMETERS Coef20 : 3.139 CoefTot : -0.134 ChDiff : 9 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.429 1.018 0.149 0.350 MesoH : -1.324 0.081 -0.573 0.055 MuHd_075 : 33.608 14.314 9.097 4.757 MuHd_095 : 39.487 24.768 11.284 7.810 MuHd_100 : 37.120 22.936 9.949 7.214 MuHd_105 : 23.298 15.698 5.785 4.925 Hmax_075 : 4.550 5.017 -1.182 2.497 Hmax_095 : 5.800 8.700 -0.360 3.940 Hmax_100 : 4.100 8.500 -0.565 3.940 Hmax_105 : -3.500 2.400 -3.030 1.990 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8665 0.1335 DFMC : 0.9226 0.0774
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 461 PKNH_1262900 MNDGLNKLTSVESEYLEKSGKKRRQKSLTLNDDVSTQQDANFERICLSTLQGEIEQNKEIALPDIYVSDRKTGQGVHPSC 80 VNLSESYPLDAEVEEEDFETLEVIKQLSSIRIDSDTDNSVGGDKVVCNKKENTPKKRNKKKRGKHTITPLWDNTDVECVE 160 DAIIYDESKDTDFPDLLQLFEEYNEKYFFNKLKSVQVKWSNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYRETLL 240 HEMIHAFLFLTRSNSRHDGHGPEFKKHMYRINKATGLCITIYHSFHKEVNFYRNHVWRCTGVCRTYPPHFGYVKRSMNRP 320 PGPKEKWWRRHSSYCRGNFIKMEKGKEDKNSDTVHFGATGYNSGILGKAMESTRVKNKKTSGKDGFEKRADTVNTELLND 400 AIVILDSKKQIMEKQKEVDEMDIINLIKTLFSDNKQKVWSFPDLSVDYHKAFKNENYFEID 480 ................................................................................ 80 .............................................................P.................. 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PKNH_1262900 7 MNDGLNK|LT 0.063 . PKNH_1262900 18 ESEYLEK|SG 0.067 . PKNH_1262900 21 YLEKSGK|KR 0.062 . PKNH_1262900 22 LEKSGKK|RR 0.083 . PKNH_1262900 23 EKSGKKR|RQ 0.166 . PKNH_1262900 24 KSGKKRR|QK 0.212 . PKNH_1262900 26 GKKRRQK|SL 0.243 . PKNH_1262900 44 QDANFER|IC 0.089 . PKNH_1262900 58 GEIEQNK|EI 0.056 . PKNH_1262900 70 DIYVSDR|KT 0.139 . PKNH_1262900 71 IYVSDRK|TG 0.071 . PKNH_1262900 105 ETLEVIK|QL 0.066 . PKNH_1262900 111 KQLSSIR|ID 0.090 . PKNH_1262900 124 NSVGGDK|VV 0.066 . PKNH_1262900 129 DKVVCNK|KE 0.055 . PKNH_1262900 130 KVVCNKK|EN 0.091 . PKNH_1262900 135 KKENTPK|KR 0.068 . PKNH_1262900 136 KENTPKK|RN 0.135 . PKNH_1262900 137 ENTPKKR|NK 0.199 . PKNH_1262900 139 TPKKRNK|KK 0.081 . PKNH_1262900 140 PKKRNKK|KR 0.364 . PKNH_1262900 141 KKRNKKK|RG 0.130 . PKNH_1262900 142 KRNKKKR|GK 0.650 *ProP* PKNH_1262900 144 NKKKRGK|HT 0.075 . PKNH_1262900 169 IIYDESK|DT 0.064 . PKNH_1262900 186 FEEYNEK|YF 0.067 . PKNH_1262900 191 EKYFFNK|LK 0.079 . PKNH_1262900 193 YFFNKLK|SV 0.112 . PKNH_1262900 198 LKSVQVK|WS 0.085 . PKNH_1262900 202 QVKWSNK|MK 0.060 . PKNH_1262900 204 KWSNKMK|LC 0.075 . PKNH_1262900 213 AGICIFK|KS 0.058 . PKNH_1262900 214 GICIFKK|SG 0.129 . PKNH_1262900 221 SGYCCIR|LS 0.078 . PKNH_1262900 228 LSLPLLK|LR 0.058 . PKNH_1262900 230 LPLLKLR|KI 0.096 . PKNH_1262900 231 PLLKLRK|IK 0.074 . PKNH_1262900 233 LKLRKIK|EY 0.152 . PKNH_1262900 236 RKIKEYR|ET 0.100 . PKNH_1262900 252 AFLFLTR|SN 0.132 . PKNH_1262900 256 LTRSNSR|HD 0.106 . PKNH_1262900 265 GHGPEFK|KH 0.061 . PKNH_1262900 266 HGPEFKK|HM 0.095 . PKNH_1262900 270 FKKHMYR|IN 0.100 . PKNH_1262900 273 HMYRINK|AT 0.161 . PKNH_1262900 287 IYHSFHK|EV 0.088 . PKNH_1262900 293 KEVNFYR|NH 0.076 . PKNH_1262900 298 YRNHVWR|CT 0.222 . PKNH_1262900 304 RCTGVCR|TY 0.086 . PKNH_1262900 314 PHFGYVK|RS 0.056 . PKNH_1262900 315 HFGYVKR|SM 0.265 . PKNH_1262900 319 VKRSMNR|PP 0.123 . PKNH_1262900 324 NRPPGPK|EK 0.063 . PKNH_1262900 326 PPGPKEK|WW 0.072 . PKNH_1262900 329 PKEKWWR|RH 0.095 . PKNH_1262900 330 KEKWWRR|HS 0.195 . PKNH_1262900 336 RHSSYCR|GN 0.113 . PKNH_1262900 341 CRGNFIK|ME 0.077 . PKNH_1262900 344 NFIKMEK|GK 0.070 . PKNH_1262900 346 IKMEKGK|ED 0.072 . PKNH_1262900 349 EKGKEDK|NS 0.073 . PKNH_1262900 368 NSGILGK|AM 0.064 . PKNH_1262900 374 KAMESTR|VK 0.090 . PKNH_1262900 376 MESTRVK|NK 0.074 . PKNH_1262900 378 STRVKNK|KT 0.089 . PKNH_1262900 379 TRVKNKK|TS 0.201 . PKNH_1262900 383 NKKTSGK|DG 0.084 . PKNH_1262900 388 GKDGFEK|RA 0.077 . PKNH_1262900 389 KDGFEKR|AD 0.188 . PKNH_1262900 408 IVILDSK|KQ 0.053 . PKNH_1262900 409 VILDSKK|QI 0.107 . PKNH_1262900 414 KKQIMEK|QK 0.076 . PKNH_1262900 416 QIMEKQK|EV 0.085 . PKNH_1262900 428 DIINLIK|TL 0.062 . PKNH_1262900 435 TLFSDNK|QK 0.066 . PKNH_1262900 437 FSDNKQK|VW 0.063 . PKNH_1262900 450 LSVDYHK|AF 0.063 . PKNH_1262900 453 DYHKAFK|NE 0.058 . ____________________________^_________________

  • Fasta :-

    >PKNH_1262900 ATGAACGACGGACTCAACAAACTAACTTCCGTTGAGAGCGAGTACCTAGAGAAGAGCGGG AAAAAAAGAAGACAAAAATCCTTAACCCTAAATGATGATGTCTCCACCCAACAGGATGCA AACTTTGAGAGAATTTGTTTGTCCACTTTACAAGGGGAAATAGAACAGAACAAGGAAATT GCTCTCCCAGATATTTATGTAAGTGATAGAAAGACGGGCCAAGGAGTACATCCCTCCTGT GTAAATCTAAGTGAAAGTTATCCTTTAGATGCAGAAGTGGAGGAAGAAGATTTTGAGACA CTCGAAGTTATTAAACAGCTCAGTTCCATTCGTATTGACTCAGACACAGATAATTCCGTC GGGGGGGATAAAGTGGTTTGTAATAAAAAGGAAAATACACCAAAAAAGCGGAACAAAAAA AAAAGGGGGAAACACACAATTACACCCTTGTGGGATAATACGGATGTAGAATGTGTGGAA GATGCCATCATATACGACGAGTCGAAGGACACGGATTTCCCAGATCTGCTGCAACTCTTC GAGGAATACAACGAGAAATATTTTTTTAACAAATTGAAATCAGTGCAGGTGAAGTGGAGC AACAAAATGAAGTTATGCGCAGGGATTTGTATATTTAAGAAATCAGGCTATTGCTGCATT CGGCTATCCCTTCCTCTTCTGAAGCTGCGGAAGATAAAGGAGTACAGGGAGACCCTACTG CACGAAATGATTCATGCGTTCCTTTTTCTAACGAGAAGCAATTCTCGACATGATGGGCAT GGACCGGAGTTCAAAAAGCACATGTACAGAATTAACAAAGCGACAGGGCTATGCATTACC ATATATCACAGTTTTCACAAGGAAGTGAACTTTTACAGAAACCATGTCTGGAGGTGCACG GGCGTCTGCAGAACTTACCCTCCCCACTTTGGGTACGTTAAAAGGTCTATGAATAGGCCC CCTGGGCCCAAGGAAAAATGGTGGAGAAGGCACTCCTCGTATTGCCGTGGCAATTTCATT AAAATGGAGAAGGGAAAAGAGGATAAGAATTCAGACACAGTACATTTTGGTGCGACGGGG TACAATTCGGGCATACTTGGAAAGGCGATGGAGTCCACCCGTGTGAAGAATAAGAAGACG AGCGGGAAAGATGGTTTTGAAAAAAGGGCAGACACTGTAAATACAGAACTGCTGAATGAC GCCATAGTCATTTTAGACTCGAAGAAACAAATTATGGAAAAGCAAAAAGAAGTAGACGAA ATGGACATTATTAATTTAATAAAAACTCTGTTTAGTGATAACAAGCAGAAGGTGTGGTCC TTCCCGGATTTATCCGTAGATTACCATAAGGCGTTTAAAAATGAAAACTATTTTGAAATA GACTAA
  • Download Fasta

  • Fasta :-

    MNDGLNKLTSVESEYLEKSGKKRRQKSLTLNDDVSTQQDANFERICLSTLQGEIEQNKEI ALPDIYVSDRKTGQGVHPSCVNLSESYPLDAEVEEEDFETLEVIKQLSSIRIDSDTDNSV GGDKVVCNKKENTPKKRNKKKRGKHTITPLWDNTDVECVEDAIIYDESKDTDFPDLLQLF EEYNEKYFFNKLKSVQVKWSNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYRETLL HEMIHAFLFLTRSNSRHDGHGPEFKKHMYRINKATGLCITIYHSFHKEVNFYRNHVWRCT GVCRTYPPHFGYVKRSMNRPPGPKEKWWRRHSSYCRGNFIKMEKGKEDKNSDTVHFGATG YNSGILGKAMESTRVKNKKTSGKDGFEKRADTVNTELLNDAIVILDSKKQIMEKQKEVDE MDIINLIKTLFSDNKQKVWSFPDLSVDYHKAFKNENYFEID

    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1262900381 SNKKTSGKDG0.998unspPKNH_1262900381 SNKKTSGKDG0.998unspPKNH_1262900381 SNKKTSGKDG0.998unspPKNH_1262900114 SIRIDSDTDN0.997unspPKNH_1262900255 STRSNSRHDG0.997unsp

PK13_3810c      PKH_121540      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India