PKNH_1269200 | signal peptidase complex catalytic subunit SEC11, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_1269200OTHER0.9940060.0059540.000040
No Results

  • Fasta :-

    >PKNH_1269200 MEYIKEQYNSILLELKKNFKTPRDGISHVLNVVCLLLNALMIWKLLVVLTGCESPVVVVL SGSMEPGYFRGDTLALYHPPNIHAGDVVVYQINGRDIPIVHRILNIHISKDNKFHLLSKG DNNNIDDRGLYEFDQYWLENEHVLGLSVGYAPYIGMLTIWVNEYPAMKWGIVSLMLFMIL LGYE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1269200.fa Sequence name : PKNH_1269200 Sequence length : 184 VALUES OF COMPUTED PARAMETERS Coef20 : 3.339 CoefTot : 0.000 ChDiff : -5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.835 2.471 0.328 0.734 MesoH : 0.156 0.889 -0.156 0.393 MuHd_075 : 7.788 3.408 2.606 1.052 MuHd_095 : 36.088 23.336 11.208 6.989 MuHd_100 : 32.541 21.166 9.501 6.523 MuHd_105 : 21.244 14.453 5.783 4.631 Hmax_075 : -6.300 2.333 -3.539 1.840 Hmax_095 : 6.300 13.300 0.602 4.670 Hmax_100 : 9.700 13.700 0.950 5.120 Hmax_105 : -4.725 2.537 -3.438 2.126 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9938 0.0062 DFMC : 0.9931 0.0069
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 184 PKNH_1269200 MEYIKEQYNSILLELKKNFKTPRDGISHVLNVVCLLLNALMIWKLLVVLTGCESPVVVVLSGSMEPGYFRGDTLALYHPP 80 NIHAGDVVVYQINGRDIPIVHRILNIHISKDNKFHLLSKGDNNNIDDRGLYEFDQYWLENEHVLGLSVGYAPYIGMLTIW 160 VNEYPAMKWGIVSLMLFMILLGYE 240 ................................................................................ 80 ................................................................................ 160 ........................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1269200 5 --MEYIK|EQ 0.057 . PKNH_1269200 16 SILLELK|KN 0.058 . PKNH_1269200 17 ILLELKK|NF 0.084 . PKNH_1269200 20 ELKKNFK|TP 0.067 . PKNH_1269200 23 KNFKTPR|DG 0.116 . PKNH_1269200 44 NALMIWK|LL 0.055 . PKNH_1269200 70 MEPGYFR|GD 0.084 . PKNH_1269200 95 VYQINGR|DI 0.100 . PKNH_1269200 102 DIPIVHR|IL 0.077 . PKNH_1269200 110 LNIHISK|DN 0.069 . PKNH_1269200 113 HISKDNK|FH 0.063 . PKNH_1269200 119 KFHLLSK|GD 0.064 . PKNH_1269200 128 NNNIDDR|GL 0.093 . PKNH_1269200 168 NEYPAMK|WG 0.066 . ____________________________^_________________

  • Fasta :-

    >PKNH_1269200 ATGGAATACATAAAGGAGCAGTACAACTCGATTTTGCTAGAACTTAAGAAGAACTTTAAA ACCCCCCGCGATGGAATATCCCACGTATTGAACGTAGTGTGCTTACTGTTGAATGCCTTG ATGATTTGGAAGCTACTCGTCGTTCTTACAGGATGCGAATCCCCAGTTGTGGTTGTCCTG AGTGGCAGTATGGAGCCAGGCTACTTCAGAGGAGACACCTTGGCACTGTACCACCCGCCG AACATCCATGCAGGCGACGTGGTGGTGTACCAAATAAATGGAAGAGACATTCCCATTGTG CATAGGATATTAAATATTCACATATCGAAGGATAACAAATTTCATTTGTTATCAAAAGGG GACAATAACAACATTGACGACAGAGGGCTCTATGAGTTCGATCAGTATTGGCTAGAAAAC GAACATGTGCTTGGTCTCTCCGTTGGATATGCACCATACATTGGAATGCTAACCATATGG GTTAATGAATACCCGGCAATGAAGTGGGGAATTGTGTCCCTCATGTTGTTTATGATATTA CTTGGGTACGAGTAA
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  • Fasta :-

    MEYIKEQYNSILLELKKNFKTPRDGISHVLNVVCLLLNALMIWKLLVVLTGCESPVVVVL SGSMEPGYFRGDTLALYHPPNIHAGDVVVYQINGRDIPIVHRILNIHISKDNKFHLLSKG DNNNIDDRGLYEFDQYWLENEHVLGLSVGYAPYIGMLTIWVNEYPAMKWGIVSLMLFMIL LGYE

  • title: Catalytic site
  • coordinates: S63,H101
No Results
No Results
No Results

PK13_3190w      PKH_122150      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India