PKNH_1302000 | SRAP domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_1302000OTHER0.9999420.0000070.000051
No Results

  • Fasta :-

    >PKNH_1302000 MCVRVYYNIDINVLKRKYNCEKILNNEKFKRGMINKKNYMPIIYETAENGKENQAPQKIK LIQVCLWGLQPFNYGKFDKEVLLINARVESLQWKKSFKLLINKNRCAIVVNGYFEWMDIK GSSKKTPYFLFFGNDENSSEEVTDGKVETKSEELTVEKTEEKSEEKVIPRIKEEGVTTSI RVKKEIELNENNKGEIKKEEKEKEEVKEEEESMITDRGALKRKIEGEEKSEKKKIKTELS NEADREENDEEEKSHVIIAGLYSISNKDKNDCRYTIITTASENSALKDMHDRCPLLLSEK TLNLWLDVEKKYEDIIESVKQEHRVVSNNLKFREVKNWTDYATK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1302000.fa Sequence name : PKNH_1302000 Sequence length : 344 VALUES OF COMPUTED PARAMETERS Coef20 : 4.122 CoefTot : -0.313 ChDiff : -2 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.276 0.641 -0.191 0.404 MesoH : -1.248 0.009 -0.621 0.107 MuHd_075 : 6.878 9.231 1.829 2.437 MuHd_095 : 22.307 15.402 7.604 6.379 MuHd_100 : 11.502 10.892 5.306 3.821 MuHd_105 : 6.027 5.833 3.640 1.014 Hmax_075 : -2.217 12.717 -0.115 2.870 Hmax_095 : -0.700 9.188 0.577 3.299 Hmax_100 : -3.400 9.300 -0.382 1.750 Hmax_105 : -3.150 11.200 1.265 1.925 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7046 0.2954 DFMC : 0.7704 0.2296
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 344 PKNH_1302000 MCVRVYYNIDINVLKRKYNCEKILNNEKFKRGMINKKNYMPIIYETAENGKENQAPQKIKLIQVCLWGLQPFNYGKFDKE 80 VLLINARVESLQWKKSFKLLINKNRCAIVVNGYFEWMDIKGSSKKTPYFLFFGNDENSSEEVTDGKVETKSEELTVEKTE 160 EKSEEKVIPRIKEEGVTTSIRVKKEIELNENNKGEIKKEEKEKEEVKEEEESMITDRGALKRKIEGEEKSEKKKIKTELS 240 NEADREENDEEEKSHVIIAGLYSISNKDKNDCRYTIITTASENSALKDMHDRCPLLLSEKTLNLWLDVEKKYEDIIESVK 320 QEHRVVSNNLKFREVKNWTDYATK 400 ................................................................................ 80 ................................................................................ 160 .......................P........................................................ 240 ................................................................................ 320 ........................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PKNH_1302000 4 ---MCVR|VY 0.074 . PKNH_1302000 15 IDINVLK|RK 0.064 . PKNH_1302000 16 DINVLKR|KY 0.138 . PKNH_1302000 17 INVLKRK|YN 0.106 . PKNH_1302000 22 RKYNCEK|IL 0.066 . PKNH_1302000 28 KILNNEK|FK 0.059 . PKNH_1302000 30 LNNEKFK|RG 0.067 . PKNH_1302000 31 NNEKFKR|GM 0.220 . PKNH_1302000 36 KRGMINK|KN 0.065 . PKNH_1302000 37 RGMINKK|NY 0.115 . PKNH_1302000 51 ETAENGK|EN 0.061 . PKNH_1302000 58 ENQAPQK|IK 0.063 . PKNH_1302000 60 QAPQKIK|LI 0.080 . PKNH_1302000 76 QPFNYGK|FD 0.069 . PKNH_1302000 79 NYGKFDK|EV 0.071 . PKNH_1302000 87 VLLINAR|VE 0.066 . PKNH_1302000 94 VESLQWK|KS 0.073 . PKNH_1302000 95 ESLQWKK|SF 0.095 . PKNH_1302000 98 QWKKSFK|LL 0.069 . PKNH_1302000 103 FKLLINK|NR 0.057 . PKNH_1302000 105 LLINKNR|CA 0.130 . PKNH_1302000 120 FEWMDIK|GS 0.071 . PKNH_1302000 124 DIKGSSK|KT 0.059 . PKNH_1302000 125 IKGSSKK|TP 0.090 . PKNH_1302000 146 EEVTDGK|VE 0.059 . PKNH_1302000 150 DGKVETK|SE 0.071 . PKNH_1302000 158 EELTVEK|TE 0.061 . PKNH_1302000 162 VEKTEEK|SE 0.083 . PKNH_1302000 166 EEKSEEK|VI 0.057 . PKNH_1302000 170 EEKVIPR|IK 0.118 . PKNH_1302000 172 KVIPRIK|EE 0.060 . PKNH_1302000 181 GVTTSIR|VK 0.082 . PKNH_1302000 183 TTSIRVK|KE 0.064 . PKNH_1302000 184 TSIRVKK|EI 0.542 *ProP* PKNH_1302000 193 ELNENNK|GE 0.072 . PKNH_1302000 197 NNKGEIK|KE 0.063 . PKNH_1302000 198 NKGEIKK|EE 0.109 . PKNH_1302000 201 EIKKEEK|EK 0.065 . PKNH_1302000 203 KKEEKEK|EE 0.072 . PKNH_1302000 207 KEKEEVK|EE 0.064 . PKNH_1302000 217 ESMITDR|GA 0.098 . PKNH_1302000 221 TDRGALK|RK 0.066 . PKNH_1302000 222 DRGALKR|KI 0.384 . PKNH_1302000 223 RGALKRK|IE 0.099 . PKNH_1302000 229 KIEGEEK|SE 0.076 . PKNH_1302000 232 GEEKSEK|KK 0.064 . PKNH_1302000 233 EEKSEKK|KI 0.115 . PKNH_1302000 234 EKSEKKK|IK 0.117 . PKNH_1302000 236 SEKKKIK|TE 0.073 . PKNH_1302000 245 LSNEADR|EE 0.096 . PKNH_1302000 253 ENDEEEK|SH 0.062 . PKNH_1302000 267 LYSISNK|DK 0.093 . PKNH_1302000 269 SISNKDK|ND 0.075 . PKNH_1302000 273 KDKNDCR|YT 0.101 . PKNH_1302000 287 SENSALK|DM 0.070 . PKNH_1302000 292 LKDMHDR|CP 0.066 . PKNH_1302000 300 PLLLSEK|TL 0.058 . PKNH_1302000 310 LWLDVEK|KY 0.072 . PKNH_1302000 311 WLDVEKK|YE 0.124 . PKNH_1302000 320 DIIESVK|QE 0.060 . PKNH_1302000 324 SVKQEHR|VV 0.112 . PKNH_1302000 331 VVSNNLK|FR 0.072 . PKNH_1302000 333 SNNLKFR|EV 0.171 . PKNH_1302000 336 LKFREVK|NW 0.134 . PKNH_1302000 344 WTDYATK|-- 0.061 . ____________________________^_________________

  • Fasta :-

    >PKNH_1302000 ATGTGTGTACGAGTATACTACAATATCGATATAAACGTTTTGAAAAGAAAGTACAACTGC GAAAAAATTCTGAACAATGAAAAATTTAAGAGAGGAATGATAAATAAGAAAAATTACATG CCCATTATCTACGAGACCGCTGAAAATGGAAAAGAAAACCAAGCCCCACAAAAAATCAAA CTAATTCAAGTTTGCCTGTGGGGCCTACAGCCATTCAACTACGGAAAATTCGACAAGGAA GTTCTTTTAATTAATGCGCGAGTAGAAAGCCTACAATGGAAGAAGTCATTCAAATTGCTA ATCAATAAGAATCGATGTGCCATTGTGGTTAACGGCTACTTCGAATGGATGGACATTAAG GGCTCTTCAAAAAAAACCCCATATTTTCTATTTTTTGGAAACGATGAAAATTCTTCTGAG GAAGTAACCGACGGAAAAGTAGAGACGAAGAGTGAGGAATTAACTGTGGAAAAGACGGAA GAAAAGAGCGAAGAAAAGGTTATCCCTAGAATAAAGGAAGAGGGAGTGACCACTAGTATT AGGGTAAAGAAAGAAATAGAGTTGAACGAAAACAACAAAGGCGAGATTAAGAAGGAAGAA AAGGAAAAAGAGGAAGTGAAGGAGGAAGAAGAATCGATGATAACAGATAGGGGCGCTCTA AAAAGGAAAATAGAAGGAGAGGAAAAGAGTGAGAAGAAAAAAATCAAAACAGAGTTATCC AACGAAGCAGATCGGGAGGAAAATGACGAAGAGGAGAAGTCCCATGTAATAATTGCAGGC CTTTACAGCATCTCCAATAAGGACAAAAACGATTGTAGATACACCATAATCACAACCGCT AGCGAAAATTCCGCCCTGAAAGACATGCATGACAGATGCCCTCTCTTGCTGAGCGAAAAA ACTCTAAACTTGTGGCTAGACGTGGAAAAAAAATACGAAGACATTATAGAAAGTGTCAAG CAGGAGCATCGAGTTGTTTCGAACAACTTGAAGTTTAGGGAAGTTAAGAACTGGACTGAT TATGCAACCAAATAG
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  • Fasta :-

    MCVRVYYNIDINVLKRKYNCEKILNNEKFKRGMINKKNYMPIIYETAENGKENQAPQKIK LIQVCLWGLQPFNYGKFDKEVLLINARVESLQWKKSFKLLINKNRCAIVVNGYFEWMDIK GSSKKTPYFLFFGNDENSSEEVTDGKVETKSEELTVEKTEEKSEEKVIPRIKEEGVTTSI RVKKEIELNENNKGEIKKEEKEKEEVKEEEESMITDRGALKRKIEGEEKSEKKKIKTELS NEADREENDEEEKSHVIIAGLYSISNKDKNDCRYTIITTASENSALKDMHDRCPLLLSEK TLNLWLDVEKKYEDIIESVKQEHRVVSNNLKFREVKNWTDYATK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1302000138 SNDENSSEEV0.991unspPKNH_1302000151 SVETKSEELT0.991unsp

PK12_0110w      PKH_130080      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India