PKNH_1348200 | alpha/beta hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1348200OTHER0.9983860.0001080.001506
No Results

  • Fasta :-

    >PKNH_1348200 MISSSKIAYEYVSCTKGRTFIVYSKNLPSSENTISNRSTSSLDRDTNSDSNNEKPIVLLL HGLNGGTHQYEKLMNSLVHLNHAFISLDFYGHGNSVLSKNLNKFTERLYTEQIYDVLRNK NILDSTFIIVAFSMGCIIATHLSAENKIHIKKFCLISAAGLAKPRHRFLIFLLKYNIRIC LRLAKKYSHLMISEDTVKNEYYNFENNVEDAMKRYAILRENHEKFIETFLKVLTGIKIQN SKKQYAALLKTNVDILFIYGKEDKLTPYSYTVKFLEKKKKYVQNVKMIILPECCHLVIHE KYSELVQHLLYFLQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1348200.fa Sequence name : PKNH_1348200 Sequence length : 314 VALUES OF COMPUTED PARAMETERS Coef20 : 4.320 CoefTot : -0.498 ChDiff : 14 ZoneTo : 30 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.047 2.124 0.400 0.725 MesoH : -0.515 0.690 -0.331 0.226 MuHd_075 : 13.118 16.307 5.616 4.621 MuHd_095 : 23.236 10.618 4.129 4.236 MuHd_100 : 17.803 10.030 4.680 4.057 MuHd_105 : 19.470 13.136 6.693 4.626 Hmax_075 : 0.262 12.600 1.089 4.503 Hmax_095 : 3.675 5.425 1.023 2.555 Hmax_100 : 3.600 9.200 1.251 3.940 Hmax_105 : 13.800 12.133 2.208 4.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8113 0.1887 DFMC : 0.8416 0.1584
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 314 PKNH_1348200 MISSSKIAYEYVSCTKGRTFIVYSKNLPSSENTISNRSTSSLDRDTNSDSNNEKPIVLLLHGLNGGTHQYEKLMNSLVHL 80 NHAFISLDFYGHGNSVLSKNLNKFTERLYTEQIYDVLRNKNILDSTFIIVAFSMGCIIATHLSAENKIHIKKFCLISAAG 160 LAKPRHRFLIFLLKYNIRICLRLAKKYSHLMISEDTVKNEYYNFENNVEDAMKRYAILRENHEKFIETFLKVLTGIKIQN 240 SKKQYAALLKTNVDILFIYGKEDKLTPYSYTVKFLEKKKKYVQNVKMIILPECCHLVIHEKYSELVQHLLYFLQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1348200 6 -MISSSK|IA 0.064 . PKNH_1348200 16 EYVSCTK|GR 0.058 . PKNH_1348200 18 VSCTKGR|TF 0.100 . PKNH_1348200 25 TFIVYSK|NL 0.067 . PKNH_1348200 37 ENTISNR|ST 0.133 . PKNH_1348200 44 STSSLDR|DT 0.103 . PKNH_1348200 54 SDSNNEK|PI 0.076 . PKNH_1348200 72 GTHQYEK|LM 0.057 . PKNH_1348200 99 GNSVLSK|NL 0.075 . PKNH_1348200 103 LSKNLNK|FT 0.075 . PKNH_1348200 107 LNKFTER|LY 0.090 . PKNH_1348200 118 QIYDVLR|NK 0.081 . PKNH_1348200 120 YDVLRNK|NI 0.061 . PKNH_1348200 147 HLSAENK|IH 0.074 . PKNH_1348200 151 ENKIHIK|KF 0.060 . PKNH_1348200 152 NKIHIKK|FC 0.107 . PKNH_1348200 163 SAAGLAK|PR 0.068 . PKNH_1348200 165 AGLAKPR|HR 0.079 . PKNH_1348200 167 LAKPRHR|FL 0.106 . PKNH_1348200 174 FLIFLLK|YN 0.061 . PKNH_1348200 178 LLKYNIR|IC 0.069 . PKNH_1348200 182 NIRICLR|LA 0.086 . PKNH_1348200 185 ICLRLAK|KY 0.123 . PKNH_1348200 186 CLRLAKK|YS 0.093 . PKNH_1348200 198 ISEDTVK|NE 0.057 . PKNH_1348200 213 NVEDAMK|RY 0.059 . PKNH_1348200 214 VEDAMKR|YA 0.195 . PKNH_1348200 219 KRYAILR|EN 0.112 . PKNH_1348200 224 LRENHEK|FI 0.110 . PKNH_1348200 231 FIETFLK|VL 0.063 . PKNH_1348200 237 KVLTGIK|IQ 0.052 . PKNH_1348200 242 IKIQNSK|KQ 0.064 . PKNH_1348200 243 KIQNSKK|QY 0.124 . PKNH_1348200 250 QYAALLK|TN 0.063 . PKNH_1348200 261 ILFIYGK|ED 0.055 . PKNH_1348200 264 IYGKEDK|LT 0.058 . PKNH_1348200 273 PYSYTVK|FL 0.082 . PKNH_1348200 277 TVKFLEK|KK 0.062 . PKNH_1348200 278 VKFLEKK|KK 0.087 . PKNH_1348200 279 KFLEKKK|KY 0.097 . PKNH_1348200 280 FLEKKKK|YV 0.209 . PKNH_1348200 286 KYVQNVK|MI 0.062 . PKNH_1348200 301 HLVIHEK|YS 0.076 . ____________________________^_________________

  • Fasta :-

    >PKNH_1348200 ATGATTTCATCAAGCAAAATCGCATACGAATATGTTAGTTGCACGAAGGGTCGCACCTTT ATAGTATACTCAAAGAACTTACCATCGAGTGAAAACACGATAAGTAACAGGTCCACGTCC TCCTTAGACCGAGATACCAATTCCGATAGCAACAATGAAAAGCCAATTGTTCTTCTTCTG CATGGGCTAAATGGGGGCACACACCAGTACGAGAAGTTGATGAATTCTTTGGTTCACCTT AACCATGCGTTTATATCGCTTGATTTCTACGGCCATGGAAATAGCGTCCTCTCGAAGAAT CTGAACAAATTTACGGAGCGGTTATACACAGAACAAATTTATGACGTTTTAAGGAACAAA AATATTTTAGATTCAACCTTCATTATTGTCGCCTTTTCCATGGGGTGTATCATAGCTACA CACCTATCTGCAGAGAATAAAATACACATAAAAAAATTCTGCTTAATCAGTGCAGCTGGG CTAGCCAAACCGAGGCATCGATTCTTAATCTTCCTACTAAAGTACAACATACGTATTTGC CTGAGACTTGCCAAGAAATACAGCCATTTGATGATCTCCGAGGACACGGTAAAGAACGAA TATTACAACTTCGAGAATAACGTAGAAGATGCGATGAAACGGTACGCAATACTCCGGGAA AATCATGAAAAGTTCATTGAGACATTTCTAAAGGTCTTAACCGGAATAAAAATCCAAAAT TCGAAGAAGCAATACGCTGCTTTGTTAAAAACGAACGTGGACATCCTTTTCATCTACGGA AAGGAAGATAAACTGACTCCCTATTCTTATACTGTAAAATTTTTGGAAAAAAAAAAGAAA TATGTGCAGAATGTAAAAATGATTATTTTACCAGAATGCTGTCACCTCGTTATACATGAG AAGTACAGTGAGTTGGTTCAGCACCTGCTCTACTTTTTGCAGTGA
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  • Fasta :-

    MISSSKIAYEYVSCTKGRTFIVYSKNLPSSENTISNRSTSSLDRDTNSDSNNEKPIVLLL HGLNGGTHQYEKLMNSLVHLNHAFISLDFYGHGNSVLSKNLNKFTERLYTEQIYDVLRNK NILDSTFIIVAFSMGCIIATHLSAENKIHIKKFCLISAAGLAKPRHRFLIFLLKYNIRIC LRLAKKYSHLMISEDTVKNEYYNFENNVEDAMKRYAILRENHEKFIETFLKVLTGIKIQN SKKQYAALLKTNVDILFIYGKEDKLTPYSYTVKFLEKKKKYVQNVKMIILPECCHLVIHE KYSELVQHLLYFLQ

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PKNH_134820040 SNRSTSSLDR0.997unsp

PK14_0395w      PKH_133760      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India