PKNH_1349100 | DNA damage-inducible protein 1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1349100OTHER0.9998640.0001360.000000
No Results

  • Fasta :-

    >PKNH_1349100 MVFITISDDSKIITSLDVHEDTEIFTIINIIENDFALNMNENELTYNGAAVNKFDTVKKL NISEGDLLFVRKKLNLDLIPQGNSSTQAGMTAAAVGAASSSTGAGITPTGASGINSNSFN SAGGVNNATFNALMDHFRTFQENEYIKKEVEILLNLKNDRSRMSVLQLQDKQLYDAITSQ DVEAIKKIVKEKLENEKKEKEREQRMYENALKDPLSEDAQKYIFENIYKNQINSNLALAQ EHFPEAFGVVYMLYIPVEINKNVVHAFVDSGAQSSIMSKQCAEKCNILRLMDTRFTGIAK GVGTRSILGKIHMVDIKIGNYFYAVSLTIIDEYDIDFIFGLDLLRRHQCQIDLKKNALVI EDNEIPFLPEKDIIANSSHSIDFDAMKESTRGV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1349100.fa Sequence name : PKNH_1349100 Sequence length : 393 VALUES OF COMPUTED PARAMETERS Coef20 : 3.928 CoefTot : 0.112 ChDiff : -14 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.524 1.265 0.199 0.625 MesoH : -0.009 0.414 -0.293 0.207 MuHd_075 : 9.122 8.608 0.517 2.597 MuHd_095 : 6.452 4.855 1.402 1.779 MuHd_100 : 3.910 8.368 2.376 2.807 MuHd_105 : 10.484 12.250 4.382 3.960 Hmax_075 : 11.783 13.500 0.820 4.700 Hmax_095 : 6.737 13.300 1.143 4.436 Hmax_100 : 7.000 17.300 1.871 5.450 Hmax_105 : 7.117 21.000 2.280 6.417 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9313 0.0687 DFMC : 0.9374 0.0626
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 393 PKNH_1349100 MVFITISDDSKIITSLDVHEDTEIFTIINIIENDFALNMNENELTYNGAAVNKFDTVKKLNISEGDLLFVRKKLNLDLIP 80 QGNSSTQAGMTAAAVGAASSSTGAGITPTGASGINSNSFNSAGGVNNATFNALMDHFRTFQENEYIKKEVEILLNLKNDR 160 SRMSVLQLQDKQLYDAITSQDVEAIKKIVKEKLENEKKEKEREQRMYENALKDPLSEDAQKYIFENIYKNQINSNLALAQ 240 EHFPEAFGVVYMLYIPVEINKNVVHAFVDSGAQSSIMSKQCAEKCNILRLMDTRFTGIAKGVGTRSILGKIHMVDIKIGN 320 YFYAVSLTIIDEYDIDFIFGLDLLRRHQCQIDLKKNALVIEDNEIPFLPEKDIIANSSHSIDFDAMKESTRGV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1349100 11 TISDDSK|II 0.070 . PKNH_1349100 53 NGAAVNK|FD 0.070 . PKNH_1349100 58 NKFDTVK|KL 0.072 . PKNH_1349100 59 KFDTVKK|LN 0.092 . PKNH_1349100 71 GDLLFVR|KK 0.061 . PKNH_1349100 72 DLLFVRK|KL 0.073 . PKNH_1349100 73 LLFVRKK|LN 0.101 . PKNH_1349100 138 ALMDHFR|TF 0.100 . PKNH_1349100 147 QENEYIK|KE 0.061 . PKNH_1349100 148 ENEYIKK|EV 0.140 . PKNH_1349100 157 EILLNLK|ND 0.052 . PKNH_1349100 160 LNLKNDR|SR 0.111 . PKNH_1349100 162 LKNDRSR|MS 0.101 . PKNH_1349100 171 VLQLQDK|QL 0.074 . PKNH_1349100 186 QDVEAIK|KI 0.060 . PKNH_1349100 187 DVEAIKK|IV 0.116 . PKNH_1349100 190 AIKKIVK|EK 0.058 . PKNH_1349100 192 KKIVKEK|LE 0.066 . PKNH_1349100 197 EKLENEK|KE 0.055 . PKNH_1349100 198 KLENEKK|EK 0.121 . PKNH_1349100 200 ENEKKEK|ER 0.065 . PKNH_1349100 202 EKKEKER|EQ 0.108 . PKNH_1349100 205 EKEREQR|MY 0.377 . PKNH_1349100 212 MYENALK|DP 0.061 . PKNH_1349100 221 LSEDAQK|YI 0.070 . PKNH_1349100 229 IFENIYK|NQ 0.057 . PKNH_1349100 261 IPVEINK|NV 0.076 . PKNH_1349100 279 QSSIMSK|QC 0.068 . PKNH_1349100 284 SKQCAEK|CN 0.066 . PKNH_1349100 289 EKCNILR|LM 0.085 . PKNH_1349100 294 LRLMDTR|FT 0.134 . PKNH_1349100 300 RFTGIAK|GV 0.078 . PKNH_1349100 305 AKGVGTR|SI 0.170 . PKNH_1349100 310 TRSILGK|IH 0.090 . PKNH_1349100 317 IHMVDIK|IG 0.058 . PKNH_1349100 345 FGLDLLR|RH 0.061 . PKNH_1349100 346 GLDLLRR|HQ 0.118 . PKNH_1349100 354 QCQIDLK|KN 0.059 . PKNH_1349100 355 CQIDLKK|NA 0.122 . PKNH_1349100 371 IPFLPEK|DI 0.074 . PKNH_1349100 387 IDFDAMK|ES 0.067 . PKNH_1349100 391 AMKESTR|GV 0.133 . ____________________________^_________________

  • Fasta :-

    >PKNH_1349100 ATGGTCTTCATCACCATCTCCGACGACAGCAAAATTATAACCAGTCTCGATGTTCACGAA GACACGGAAATTTTCACCATCATCAACATTATCGAAAATGATTTCGCGCTAAATATGAAC GAAAATGAATTGACATACAACGGGGCCGCCGTTAACAAGTTCGACACGGTGAAGAAGCTG AATATAAGTGAAGGAGACCTGCTCTTTGTGAGGAAGAAATTAAATCTGGATTTAATCCCC CAAGGAAATTCTAGCACTCAGGCAGGAATGACAGCAGCGGCAGTAGGGGCAGCTTCCAGC TCCACAGGGGCTGGAATTACTCCCACCGGTGCTAGCGGTATAAACTCGAACAGCTTTAAC AGTGCGGGAGGAGTAAACAATGCAACGTTTAACGCACTGATGGATCATTTTCGCACCTTC CAAGAGAACGAATACATAAAGAAAGAAGTGGAAATTTTACTAAACCTAAAAAATGACAGA AGCAGGATGAGTGTCCTACAATTACAAGACAAACAATTGTATGATGCTATAACTAGCCAA GATGTTGAAGCAATAAAAAAAATTGTAAAAGAAAAATTGGAAAATGAAAAAAAAGAAAAA GAAAGAGAACAACGTATGTACGAAAATGCATTGAAAGATCCACTCTCAGAAGATGCACAA AAATATATTTTTGAAAATATTTACAAAAATCAAATAAACTCAAATTTGGCATTAGCCCAG GAACATTTCCCTGAAGCATTTGGAGTTGTTTACATGTTATACATTCCTGTTGAAATAAAT AAAAATGTGGTGCATGCTTTTGTCGATTCGGGGGCGCAGTCTAGTATCATGTCCAAGCAA TGTGCAGAAAAATGCAACATTTTAAGATTAATGGATACGAGATTTACAGGAATTGCCAAA GGAGTTGGTACCAGATCCATTTTAGGGAAAATCCACATGGTCGACATTAAAATTGGAAAC TATTTCTATGCCGTTTCGTTAACCATTATTGATGAATATGACATTGACTTTATATTCGGC TTAGATTTGTTGAGGAGACACCAGTGTCAAATCGACTTGAAGAAAAATGCCCTCGTCATT GAGGATAATGAAATTCCATTCTTGCCGGAGAAGGATATCATTGCTAATTCATCACACAGC ATTGACTTCGACGCCATGAAAGAGTCTACGCGTGGGGTCTAA
  • Download Fasta

  • Fasta :-

    MVFITISDDSKIITSLDVHEDTEIFTIINIIENDFALNMNENELTYNGAAVNKFDTVKKL NISEGDLLFVRKKLNLDLIPQGNSSTQAGMTAAAVGAASSSTGAGITPTGASGINSNSFN SAGGVNNATFNALMDHFRTFQENEYIKKEVEILLNLKNDRSRMSVLQLQDKQLYDAITSQ DVEAIKKIVKEKLENEKKEKEREQRMYENALKDPLSEDAQKYIFENIYKNQINSNLALAQ EHFPEAFGVVYMLYIPVEINKNVVHAFVDSGAQSSIMSKQCAEKCNILRLMDTRFTGIAK GVGTRSILGKIHMVDIKIGNYFYAVSLTIIDEYDIDFIFGLDLLRRHQCQIDLKKNALVI EDNEIPFLPEKDIIANSSHSIDFDAMKESTRGV

  • title: catalytic motif
  • coordinates: D269,S270,G271
No Results
No Results
IDSitePeptideScoreMethod
PKNH_134910063 SKLNISEGDL0.99unsp

PK14_0345w      PKH_133840      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India