PKNH_1350300 | plasmepsin IV, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1350300OTHER0.9999750.0000040.000022
No Results

  • Fasta :-

    >PKNH_1350300 MDIAVKEQDYSNGLIKNSAAFENLKFSNIKNFKVQKRFQILYFILFVFVTGIFFFFLIST YFFSPNYNVNKIVQNTEHLTLAFKIERPYDKVLKTISKKNLKNYVKETYNFFKSGYMKQN YLGSENDVIELDDVANIMFYGEGEVGDNHQKFTLIFDTGSANLWVPSKKCTSLGCHIKNL YDSSKSKTYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDELEPIYSS TEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPIHDVHAGYLTIGGIEEKF YEGNITYEKLNHDLYWQIDLDVHFGKQTMQKANVIVDSGTTTITAPSEFLNKFFANLNVI KVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPLLDVDDTLCMITMLPVDIDTN TFILGDPFMRKYFTVFDYDNESVGFAIAKN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1350300.fa Sequence name : PKNH_1350300 Sequence length : 450 VALUES OF COMPUTED PARAMETERS Coef20 : 3.462 CoefTot : 0.000 ChDiff : -14 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.871 2.776 0.503 1.041 MesoH : -0.300 0.475 -0.402 0.282 MuHd_075 : 33.119 22.849 10.947 6.645 MuHd_095 : 21.533 12.441 6.521 3.556 MuHd_100 : 31.692 15.802 8.470 4.787 MuHd_105 : 32.990 14.906 8.077 4.762 Hmax_075 : 2.800 11.200 -0.125 4.200 Hmax_095 : 3.600 9.500 0.152 3.420 Hmax_100 : 3.600 9.500 0.152 3.420 Hmax_105 : -0.175 2.975 -2.185 2.170 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9563 0.0437 DFMC : 0.9486 0.0514
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 450 PKNH_1350300 MDIAVKEQDYSNGLIKNSAAFENLKFSNIKNFKVQKRFQILYFILFVFVTGIFFFFLISTYFFSPNYNVNKIVQNTEHLT 80 LAFKIERPYDKVLKTISKKNLKNYVKETYNFFKSGYMKQNYLGSENDVIELDDVANIMFYGEGEVGDNHQKFTLIFDTGS 160 ANLWVPSKKCTSLGCHIKNLYDSSKSKTYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDELEPIYSS 240 TEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPIHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDL 320 DVHFGKQTMQKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPL 400 LDVDDTLCMITMLPVDIDTNTFILGDPFMRKYFTVFDYDNESVGFAIAKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1350300 6 -MDIAVK|EQ 0.055 . PKNH_1350300 16 YSNGLIK|NS 0.069 . PKNH_1350300 25 AAFENLK|FS 0.061 . PKNH_1350300 30 LKFSNIK|NF 0.062 . PKNH_1350300 33 SNIKNFK|VQ 0.058 . PKNH_1350300 36 KNFKVQK|RF 0.062 . PKNH_1350300 37 NFKVQKR|FQ 0.189 . PKNH_1350300 71 PNYNVNK|IV 0.093 . PKNH_1350300 84 HLTLAFK|IE 0.057 . PKNH_1350300 87 LAFKIER|PY 0.117 . PKNH_1350300 91 IERPYDK|VL 0.064 . PKNH_1350300 94 PYDKVLK|TI 0.064 . PKNH_1350300 98 VLKTISK|KN 0.056 . PKNH_1350300 99 LKTISKK|NL 0.094 . PKNH_1350300 102 ISKKNLK|NY 0.060 . PKNH_1350300 106 NLKNYVK|ET 0.064 . PKNH_1350300 113 ETYNFFK|SG 0.087 . PKNH_1350300 118 FKSGYMK|QN 0.069 . PKNH_1350300 151 VGDNHQK|FT 0.064 . PKNH_1350300 168 NLWVPSK|KC 0.062 . PKNH_1350300 169 LWVPSKK|CT 0.138 . PKNH_1350300 178 SLGCHIK|NL 0.074 . PKNH_1350300 185 NLYDSSK|SK 0.086 . PKNH_1350300 187 YDSSKSK|TY 0.080 . PKNH_1350300 191 KSKTYEK|DG 0.072 . PKNH_1350300 195 YEKDGTK|VD 0.057 . PKNH_1350300 206 YGSGTVK|GF 0.071 . PKNH_1350300 211 VKGFFSK|DL 0.081 . PKNH_1350300 224 HLSMPYK|FI 0.099 . PKNH_1350300 252 ILGLGWK|DL 0.072 . PKNH_1350300 267 PIVVELK|NQ 0.061 . PKNH_1350300 271 ELKNQNK|ID 0.062 . PKNH_1350300 299 IGGIEEK|FY 0.073 . PKNH_1350300 309 GNITYEK|LN 0.060 . PKNH_1350300 326 LDVHFGK|QT 0.093 . PKNH_1350300 331 GKQTMQK|AN 0.073 . PKNH_1350300 352 PSEFLNK|FF 0.059 . PKNH_1350300 361 ANLNVIK|VP 0.055 . PKNH_1350300 375 VTTCDNK|EM 0.055 . PKNH_1350300 383 MPTLEFK|SA 0.080 . PKNH_1350300 430 LGDPFMR|KY 0.091 . PKNH_1350300 431 GDPFMRK|YF 0.077 . PKNH_1350300 449 VGFAIAK|N- 0.067 . ____________________________^_________________

  • Fasta :-

    >PKNH_1350300 ATGGATATAGCAGTGAAAGAACAAGACTACTCAAACGGGCTTATCAAAAACTCAGCCGCG TTTGAAAATCTCAAATTTAGCAATATCAAAAATTTTAAAGTTCAGAAAAGATTCCAAATA CTCTATTTCATTCTGTTTGTTTTTGTAACGGGGATATTTTTCTTCTTCCTAATTAGTACC TATTTCTTTTCCCCCAATTATAACGTTAACAAAATTGTACAGAACACCGAACATTTAACT TTAGCTTTTAAAATAGAGAGACCCTATGACAAGGTATTAAAAACTATCTCCAAGAAAAAC TTGAAAAATTATGTGAAGGAAACCTATAATTTCTTCAAATCTGGATATATGAAACAGAAC TATTTAGGAAGTGAAAATGATGTAATCGAATTAGATGATGTAGCAAACATTATGTTTTAT GGAGAAGGAGAAGTTGGAGACAATCACCAAAAATTTACACTCATTTTTGACACTGGTTCA GCCAACTTGTGGGTCCCAAGTAAGAAATGTACTTCCCTCGGATGCCACATTAAAAACCTG TACGATTCTAGCAAATCCAAAACTTACGAGAAAGATGGAACTAAAGTTGACATCACTTAC GGATCTGGAACCGTAAAAGGTTTCTTCAGTAAAGATTTAGTAACCTTGGGTCATTTGTCC ATGCCATACAAATTTATAGAAGTCACCGACACCGATGAATTAGAACCCATTTACAGTAGC ACCGAATTCGATGGAATATTAGGTTTAGGATGGAAAGATCTTTCCATCGGATCCATTGAT CCCATCGTTGTAGAATTAAAGAACCAAAACAAAATAGACAATGCCTTATTCACCTTCTAC CTTCCCATCCACGATGTCCACGCCGGTTACCTAACCATTGGTGGAATTGAAGAAAAATTC TACGAAGGAAACATCACTTACGAAAAATTAAATCACGACTTGTACTGGCAAATTGATTTA GATGTACATTTTGGAAAACAAACTATGCAAAAGGCCAACGTCATTGTTGATAGTGGTACA ACAACTATTACCGCCCCTTCAGAATTCTTGAACAAATTTTTTGCTAACCTAAATGTTATT AAAGTTCCTTTCCTTCCATTCTACGTAACCACTTGTGATAATAAGGAAATGCCAACTCTT GAGTTCAAATCAGCCAACAACACTTACACCTTGGAGCCCGAATATTACATGAACCCACTT CTCGACGTCGATGACACCTTATGTATGATTACCATGTTACCAGTCGACATTGATACCAAC ACCTTCATTTTGGGAGACCCATTCATGAGAAAATACTTCACCGTTTTTGACTACGACAAC GAGAGTGTCGGTTTTGCTATCGCTAAGAACTGA
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  • Fasta :-

    MDIAVKEQDYSNGLIKNSAAFENLKFSNIKNFKVQKRFQILYFILFVFVTGIFFFFLIST YFFSPNYNVNKIVQNTEHLTLAFKIERPYDKVLKTISKKNLKNYVKETYNFFKSGYMKQN YLGSENDVIELDDVANIMFYGEGEVGDNHQKFTLIFDTGSANLWVPSKKCTSLGCHIKNL YDSSKSKTYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDELEPIYSS TEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPIHDVHAGYLTIGGIEEKF YEGNITYEKLNHDLYWQIDLDVHFGKQTMQKANVIVDSGTTTITAPSEFLNKFFANLNVI KVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPLLDVDDTLCMITMLPVDIDTN TFILGDPFMRKYFTVFDYDNESVGFAIAKN

  • title: catalytic residue
  • coordinates: D157,D337
No Results
No Results
No Results

PK14_0290w      PKH_133920      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India