PKNH_1401500 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_1401500OTHER0.9999930.0000060.000002
No Results

  • Fasta :-

    >PKNH_1401500 MDECISREEDNNTPTTTKVDGNPKLGAFFNKDGLLMSSYGWLVKNAIGIILLIHGLNSHA RLTFLRQNVEIVDNDKVILKDANNYYVYKDSWIEHFNKNGYSVYALDLEGHGLSDGWGDL SLNINKFDDLVHDVIQYLNIINDDLCLEENEKNSKAICDKAKECTTLCNYDNGSNNDKCK RNVRSNNKRKREKASKGTNNPQSNDKPCSSKEHTNNKCSSLPIYILGQSMGGNIALRTLQ VLEKTQNNGKGRLNIQGCISLSSMICFQKIASPRSYKYKIFYLPFTRLIGSLFPTLRLAT KIGFQKYPYLNQLSNFDNITSKIGLTLKYWCELVKATSNLEKDMRYMPKDIPILFIHSKE DIFCLYRGVVSFFNRLDNDNKELISLDNMEHGLTTEPGNEIVLEKIVNWIKKLKTKKQMT KSLKNK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1401500.fa Sequence name : PKNH_1401500 Sequence length : 426 VALUES OF COMPUTED PARAMETERS Coef20 : 3.296 CoefTot : 0.000 ChDiff : 12 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.124 1.559 0.141 0.664 MesoH : -0.452 0.219 -0.338 0.174 MuHd_075 : 29.069 16.522 8.341 5.747 MuHd_095 : 31.291 16.382 7.915 5.982 MuHd_100 : 22.396 12.480 5.022 4.880 MuHd_105 : 7.269 5.877 0.424 2.737 Hmax_075 : -1.283 -0.233 -2.157 1.202 Hmax_095 : -2.100 0.500 -1.683 0.710 Hmax_100 : -2.100 0.500 -1.683 0.710 Hmax_105 : -15.400 -8.200 -5.965 -1.170 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9084 0.0916 DFMC : 0.9382 0.0618
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 426 PKNH_1401500 MDECISREEDNNTPTTTKVDGNPKLGAFFNKDGLLMSSYGWLVKNAIGIILLIHGLNSHARLTFLRQNVEIVDNDKVILK 80 DANNYYVYKDSWIEHFNKNGYSVYALDLEGHGLSDGWGDLSLNINKFDDLVHDVIQYLNIINDDLCLEENEKNSKAICDK 160 AKECTTLCNYDNGSNNDKCKRNVRSNNKRKREKASKGTNNPQSNDKPCSSKEHTNNKCSSLPIYILGQSMGGNIALRTLQ 240 VLEKTQNNGKGRLNIQGCISLSSMICFQKIASPRSYKYKIFYLPFTRLIGSLFPTLRLATKIGFQKYPYLNQLSNFDNIT 320 SKIGLTLKYWCELVKATSNLEKDMRYMPKDIPILFIHSKEDIFCLYRGVVSFFNRLDNDNKELISLDNMEHGLTTEPGNE 400 IVLEKIVNWIKKLKTKKQMTKSLKNK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1401500 7 MDECISR|EE 0.083 . PKNH_1401500 18 NTPTTTK|VD 0.057 . PKNH_1401500 24 KVDGNPK|LG 0.053 . PKNH_1401500 31 LGAFFNK|DG 0.065 . PKNH_1401500 44 SYGWLVK|NA 0.068 . PKNH_1401500 61 GLNSHAR|LT 0.118 . PKNH_1401500 66 ARLTFLR|QN 0.091 . PKNH_1401500 76 EIVDNDK|VI 0.054 . PKNH_1401500 80 NDKVILK|DA 0.071 . PKNH_1401500 89 NNYYVYK|DS 0.082 . PKNH_1401500 98 WIEHFNK|NG 0.059 . PKNH_1401500 126 LSLNINK|FD 0.063 . PKNH_1401500 152 CLEENEK|NS 0.055 . PKNH_1401500 155 ENEKNSK|AI 0.068 . PKNH_1401500 160 SKAICDK|AK 0.068 . PKNH_1401500 162 AICDKAK|EC 0.069 . PKNH_1401500 178 NGSNNDK|CK 0.069 . PKNH_1401500 180 SNNDKCK|RN 0.071 . PKNH_1401500 181 NNDKCKR|NV 0.217 . PKNH_1401500 184 KCKRNVR|SN 0.312 . PKNH_1401500 188 NVRSNNK|RK 0.055 . PKNH_1401500 189 VRSNNKR|KR 0.266 . PKNH_1401500 190 RSNNKRK|RE 0.107 . PKNH_1401500 191 SNNKRKR|EK 0.294 . PKNH_1401500 193 NKRKREK|AS 0.067 . PKNH_1401500 196 KREKASK|GT 0.071 . PKNH_1401500 206 NPQSNDK|PC 0.081 . PKNH_1401500 211 DKPCSSK|EH 0.060 . PKNH_1401500 217 KEHTNNK|CS 0.063 . PKNH_1401500 237 GGNIALR|TL 0.101 . PKNH_1401500 244 TLQVLEK|TQ 0.064 . PKNH_1401500 250 KTQNNGK|GR 0.062 . PKNH_1401500 252 QNNGKGR|LN 0.132 . PKNH_1401500 269 SMICFQK|IA 0.068 . PKNH_1401500 274 QKIASPR|SY 0.163 . PKNH_1401500 277 ASPRSYK|YK 0.167 . PKNH_1401500 279 PRSYKYK|IF 0.083 . PKNH_1401500 287 FYLPFTR|LI 0.088 . PKNH_1401500 297 SLFPTLR|LA 0.124 . PKNH_1401500 301 TLRLATK|IG 0.074 . PKNH_1401500 306 TKIGFQK|YP 0.066 . PKNH_1401500 322 FDNITSK|IG 0.059 . PKNH_1401500 328 KIGLTLK|YW 0.066 . PKNH_1401500 335 YWCELVK|AT 0.075 . PKNH_1401500 342 ATSNLEK|DM 0.079 . PKNH_1401500 345 NLEKDMR|YM 0.092 . PKNH_1401500 349 DMRYMPK|DI 0.086 . PKNH_1401500 359 ILFIHSK|ED 0.063 . PKNH_1401500 367 DIFCLYR|GV 0.086 . PKNH_1401500 375 VVSFFNR|LD 0.091 . PKNH_1401500 381 RLDNDNK|EL 0.061 . PKNH_1401500 405 NEIVLEK|IV 0.078 . PKNH_1401500 411 KIVNWIK|KL 0.061 . PKNH_1401500 412 IVNWIKK|LK 0.152 . PKNH_1401500 414 NWIKKLK|TK 0.068 . PKNH_1401500 416 IKKLKTK|KQ 0.064 . PKNH_1401500 417 KKLKTKK|QM 0.124 . PKNH_1401500 421 TKKQMTK|SL 0.094 . PKNH_1401500 424 QMTKSLK|NK 0.061 . PKNH_1401500 426 TKSLKNK|-- 0.094 . ____________________________^_________________

  • Fasta :-

    >PKNH_1401500 ATGGATGAATGTATTTCCCGTGAAGAAGATAACAACACCCCAACAACTACTAAAGTAGAC GGCAATCCCAAACTTGGTGCTTTCTTTAATAAGGATGGCTTATTAATGTCAAGCTATGGG TGGTTAGTAAAAAACGCGATAGGTATTATACTACTAATTCATGGTCTAAATTCACATGCA AGATTGACCTTTTTACGACAGAATGTTGAAATAGTAGATAACGATAAAGTTATATTAAAA GACGCAAATAATTATTATGTTTATAAAGATAGCTGGATAGAACATTTTAATAAAAATGGA TATTCAGTGTATGCATTAGATTTAGAAGGTCATGGACTATCTGACGGGTGGGGAGATCTA AGTCTGAATATTAACAAATTTGATGATTTGGTGCATGACGTAATACAATACCTTAATATA ATTAATGATGATTTATGTTTAGAGGAGAATGAAAAGAATTCGAAGGCAATTTGTGATAAG GCTAAGGAGTGTACTACTTTGTGTAATTATGACAATGGAAGTAATAATGATAAATGTAAA AGGAATGTGCGGAGTAATAATAAACGCAAAAGGGAGAAAGCTTCCAAGGGTACTAATAAT CCTCAAAGTAATGATAAACCCTGCTCTAGTAAAGAACATACGAATAATAAATGTTCTTCC CTTCCAATATACATACTTGGTCAATCAATGGGAGGAAATATTGCTTTAAGAACATTGCAA GTGTTAGAGAAGACACAAAATAATGGGAAAGGAAGATTAAACATTCAAGGTTGTATCTCA TTATCAAGTATGATTTGTTTTCAGAAAATAGCTTCACCACGTTCATATAAATATAAAATA TTTTATTTACCATTTACAAGATTAATTGGTAGCCTGTTTCCAACATTAAGACTTGCCACA AAAATAGGATTTCAAAAATACCCCTATCTAAATCAACTTTCTAATTTTGATAATATTACC TCCAAAATTGGCTTAACCTTAAAATATTGGTGTGAACTTGTAAAAGCAACGAGTAACTTA GAGAAAGATATGCGATACATGCCTAAAGATATTCCTATATTGTTTATTCATTCCAAGGAA GATATTTTTTGTTTGTATAGAGGCGTAGTATCATTTTTTAATAGATTAGATAATGATAAT AAAGAATTGATTTCACTAGATAATATGGAGCACGGGTTAACCACGGAGCCTGGAAATGAA ATAGTCTTAGAAAAAATAGTAAATTGGATTAAAAAATTAAAAACAAAAAAACAAATGACG AAAAGTTTGAAAAATAAATAA
  • Download Fasta

  • Fasta :-

    MDECISREEDNNTPTTTKVDGNPKLGAFFNKDGLLMSSYGWLVKNAIGIILLIHGLNSHA RLTFLRQNVEIVDNDKVILKDANNYYVYKDSWIEHFNKNGYSVYALDLEGHGLSDGWGDL SLNINKFDDLVHDVIQYLNIINDDLCLEENEKNSKAICDKAKECTTLCNYDNGSNNDKCK RNVRSNNKRKREKASKGTNNPQSNDKPCSSKEHTNNKCSSLPIYILGQSMGGNIALRTLQ VLEKTQNNGKGRLNIQGCISLSSMICFQKIASPRSYKYKIFYLPFTRLIGSLFPTLRLAT KIGFQKYPYLNQLSNFDNITSKIGLTLKYWCELVKATSNLEKDMRYMPKDIPILFIHSKE DIFCLYRGVVSFFNRLDNDNKELISLDNMEHGLTTEPGNEIVLEKIVNWIKKLKTKKQMT KSLKNK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1401500358 SLFIHSKEDI0.996unspPKNH_1401500358 SLFIHSKEDI0.996unspPKNH_1401500358 SLFIHSKEDI0.996unspPKNH_1401500209 SDKPCSSKEH0.994unspPKNH_1401500272 SQKIASPRSY0.992unsp

PKH_000320      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India