PKNH_1405800 | site-2 protease S2P, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_1405800OTHER0.9999910.0000010.000008
No Results

  • Fasta :-

    >PKNH_1405800 MDPKNNMFFCSNTRMENRRLGSNYLYMWREKSYDYEKHPDVLSFILSMVPLLIVIVVHLL INTNGYYIGNLFLMITYLFSFFFFILYYYNSYAVFVLFVFFSFFISLCLHEFAHALVAYK YGDITMVYKGYLYLDIVNYLDIFHTLVIPLVTLLTTGFGLPGNLYWLQLHFIRSRFQMSF IYLSGPISDILCILVIVFFYNFYSYFKNSKNLSAQPHSILLISLATAASVLVDSFLLNIC PIFGFDGWGILEPYLPYCLNTLINEEIVNTYLSYICPLLVFIYFNFIETKYLFFTRIVNF ILGRILGIEISHVTIGVNAFPTLFAYLRNV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1405800.fa Sequence name : PKNH_1405800 Sequence length : 330 VALUES OF COMPUTED PARAMETERS Coef20 : 4.202 CoefTot : -1.063 ChDiff : -1 ZoneTo : 29 KR : 5 DE : 2 CleavSite : 31 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.724 3.012 0.553 0.926 MesoH : 1.633 1.764 0.179 0.711 MuHd_075 : 28.496 18.479 7.322 7.544 MuHd_095 : 22.236 10.811 5.327 6.426 MuHd_100 : 23.748 8.177 5.267 6.017 MuHd_105 : 20.915 8.133 5.071 4.603 Hmax_075 : 1.283 7.300 0.351 2.660 Hmax_095 : -3.500 6.125 1.034 1.908 Hmax_100 : 4.800 3.200 0.268 2.460 Hmax_105 : -3.383 -3.850 -1.743 0.502 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8945 0.1055 DFMC : 0.8751 0.1249
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 330 PKNH_1405800 MDPKNNMFFCSNTRMENRRLGSNYLYMWREKSYDYEKHPDVLSFILSMVPLLIVIVVHLLINTNGYYIGNLFLMITYLFS 80 FFFFILYYYNSYAVFVLFVFFSFFISLCLHEFAHALVAYKYGDITMVYKGYLYLDIVNYLDIFHTLVIPLVTLLTTGFGL 160 PGNLYWLQLHFIRSRFQMSFIYLSGPISDILCILVIVFFYNFYSYFKNSKNLSAQPHSILLISLATAASVLVDSFLLNIC 240 PIFGFDGWGILEPYLPYCLNTLINEEIVNTYLSYICPLLVFIYFNFIETKYLFFTRIVNFILGRILGIEISHVTIGVNAF 320 PTLFAYLRNV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1405800 4 ---MDPK|NN 0.056 . PKNH_1405800 14 FFCSNTR|ME 0.073 . PKNH_1405800 18 NTRMENR|RL 0.096 . PKNH_1405800 19 TRMENRR|LG 0.203 . PKNH_1405800 29 NYLYMWR|EK 0.069 . PKNH_1405800 31 LYMWREK|SY 0.082 . PKNH_1405800 37 KSYDYEK|HP 0.059 . PKNH_1405800 120 HALVAYK|YG 0.063 . PKNH_1405800 129 DITMVYK|GY 0.057 . PKNH_1405800 173 LQLHFIR|SR 0.106 . PKNH_1405800 175 LHFIRSR|FQ 0.080 . PKNH_1405800 207 NFYSYFK|NS 0.052 . PKNH_1405800 210 SYFKNSK|NL 0.078 . PKNH_1405800 290 FNFIETK|YL 0.064 . PKNH_1405800 296 KYLFFTR|IV 0.124 . PKNH_1405800 304 VNFILGR|IL 0.109 . PKNH_1405800 328 TLFAYLR|NV 0.116 . ____________________________^_________________

  • Fasta :-

    >PKNH_1405800 ATGGATCCAAAAAACAACATGTTTTTTTGCAGCAACACACGAATGGAAAACAGAAGATTA GGTAGCAATTACCTTTACATGTGGAGAGAAAAAAGTTACGATTATGAAAAACACCCAGAT GTCCTGTCGTTTATTCTGTCCATGGTTCCTTTGTTAATAGTAATTGTGGTTCACCTTTTG ATAAATACAAATGGTTACTACATTGGGAATTTATTCCTAATGATAACTTATTTATTTTCT TTTTTTTTCTTTATTTTGTATTATTATAATTCTTACGCAGTTTTTGTTCTATTTGTGTTT TTCTCTTTTTTTATATCATTGTGTTTACACGAATTTGCACACGCGCTTGTTGCATATAAG TACGGCGACATTACCATGGTTTATAAGGGCTACCTCTATCTGGACATTGTAAATTATTTA GACATTTTTCACACGCTCGTAATACCATTAGTAACACTGCTTACAACGGGATTTGGGTTA CCAGGAAATTTATATTGGCTGCAACTACACTTTATCAGAAGCAGATTTCAGATGTCCTTT ATTTATTTATCGGGCCCCATATCAGACATTTTGTGTATCCTGGTAATTGTTTTTTTTTAC AATTTTTACTCATATTTTAAGAATAGCAAAAATTTAAGTGCACAGCCTCACTCCATTTTA TTAATATCTCTTGCGACGGCTGCTTCTGTCCTCGTGGATTCTTTTCTTTTAAACATTTGT CCAATTTTTGGCTTTGACGGATGGGGAATCCTGGAACCCTACCTTCCTTACTGTCTAAAT ACCCTAATCAATGAAGAAATTGTGAACACCTATTTGTCTTACATATGCCCCCTCCTGGTT TTTATATATTTTAACTTTATCGAAACCAAGTACCTTTTCTTCACAAGAATTGTTAACTTT ATATTGGGGCGGATTCTTGGAATTGAGATTTCGCACGTGACAATTGGAGTTAACGCCTTT CCTACGTTATTTGCCTACCTCAGAAATGTGTAG
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  • Fasta :-

    MDPKNNMFFCSNTRMENRRLGSNYLYMWREKSYDYEKHPDVLSFILSMVPLLIVIVVHLL INTNGYYIGNLFLMITYLFSFFFFILYYYNSYAVFVLFVFFSFFISLCLHEFAHALVAYK YGDITMVYKGYLYLDIVNYLDIFHTLVIPLVTLLTTGFGLPGNLYWLQLHFIRSRFQMSF IYLSGPISDILCILVIVFFYNFYSYFKNSKNLSAQPHSILLISLATAASVLVDSFLLNIC PIFGFDGWGILEPYLPYCLNTLINEEIVNTYLSYICPLLVFIYFNFIETKYLFFTRIVNF ILGRILGIEISHVTIGVNAFPTLFAYLRNV

    No Results
  • title: active site
  • coordinates: H110,E111,H114,N238,D246
No Results
No Results
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PK13_0410c      PKH_140410      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India