_IDPredictionOTHERSPmTPCS_Position
PKNH_1417700OTHER0.9999960.0000010.000003
No Results
  • Fasta :-

    >PKNH_1417700 MEKKGRKKNPDDKVHSGNKRGRKKKESLSEEVEKMDGNDEAKETDQAGEANQTIPTEATN VTSLTDERRLIPRGAGRGRGRVCPYLRTINRNLLDFDFEKLCSISMSNLHVYACLVCGVY FQGIGKGTHAYTHALEKNHYVFINLETCKTCCLPENYEIEDASLNDIKYFLKPTYSRDQV EYICRNSILGKSLDGADFFPGFVGLNNLKHTDYCNVIIQLVCSIIPLRNFFLVFENKKYV SKNIVSSLSELIKKIFNPRNFKGVVSPHEFLQTVGIESKKTFKIGSKNDPLDFFLWLISK IHRYQERALRKGTKSMMGKKRKISKSGEKDKRADGQSGEQNKRQEEDEEDEEVDDEEGKI QPGHHLSQLNAMLSSSSESYMSEEAVPGIDLPTKRKKKKKKKKWKYDKVNIIDYCFDGEL IIKTKKKKKKKSSEGDENMSSTHNTKKREKNDTYHERNAREDGKFSNHLNNEGGVENDMS NSDEDDTDLQDGEELNEEKNYVTEKIPFRTLSLKLPNPPIFKSTTESNIIPQVSIFELLT KFDGETESFLNEKSEPSTLILSKLPKYLVFTIKRFSKNNFFVEKNGTIVNFVIKNLDMKD YIHEDYLEKNPVTKYNLIANIFHSGSVNNGTYKIHVLNQASNEWYEMEDLHVITVLPQLV LLPESCVQLYQRQDVQLNGEVP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1417700.fa Sequence name : PKNH_1417700 Sequence length : 682 VALUES OF COMPUTED PARAMETERS Coef20 : 2.812 CoefTot : 0.000 ChDiff : 3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.235 1.882 0.305 0.589 MesoH : -0.635 0.415 -0.353 0.214 MuHd_075 : 34.581 14.144 9.343 5.525 MuHd_095 : 16.243 5.408 5.206 2.562 MuHd_100 : 6.940 0.452 2.962 1.081 MuHd_105 : 6.307 6.253 1.348 2.288 Hmax_075 : -1.167 -3.033 -4.213 1.353 Hmax_095 : -21.875 -11.900 -8.218 -2.187 Hmax_100 : -20.800 -12.600 -9.299 -2.640 Hmax_105 : -24.600 -9.100 -9.266 -2.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9933 0.0067 DFMC : 0.9868 0.0132
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 682 PKNH_1417700 MEKKGRKKNPDDKVHSGNKRGRKKKESLSEEVEKMDGNDEAKETDQAGEANQTIPTEATNVTSLTDERRLIPRGAGRGRG 80 RVCPYLRTINRNLLDFDFEKLCSISMSNLHVYACLVCGVYFQGIGKGTHAYTHALEKNHYVFINLETCKTCCLPENYEIE 160 DASLNDIKYFLKPTYSRDQVEYICRNSILGKSLDGADFFPGFVGLNNLKHTDYCNVIIQLVCSIIPLRNFFLVFENKKYV 240 SKNIVSSLSELIKKIFNPRNFKGVVSPHEFLQTVGIESKKTFKIGSKNDPLDFFLWLISKIHRYQERALRKGTKSMMGKK 320 RKISKSGEKDKRADGQSGEQNKRQEEDEEDEEVDDEEGKIQPGHHLSQLNAMLSSSSESYMSEEAVPGIDLPTKRKKKKK 400 KKKWKYDKVNIIDYCFDGELIIKTKKKKKKKSSEGDENMSSTHNTKKREKNDTYHERNAREDGKFSNHLNNEGGVENDMS 480 NSDEDDTDLQDGEELNEEKNYVTEKIPFRTLSLKLPNPPIFKSTTESNIIPQVSIFELLTKFDGETESFLNEKSEPSTLI 560 LSKLPKYLVFTIKRFSKNNFFVEKNGTIVNFVIKNLDMKDYIHEDYLEKNPVTKYNLIANIFHSGSVNNGTYKIHVLNQA 640 SNEWYEMEDLHVITVLPQLVLLPESCVQLYQRQDVQLNGEVP 720 ........................P....................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .......................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PKNH_1417700 3 ----MEK|KG 0.060 . PKNH_1417700 4 ---MEKK|GR 0.102 . PKNH_1417700 6 -MEKKGR|KK 0.088 . PKNH_1417700 7 MEKKGRK|KN 0.073 . PKNH_1417700 8 EKKGRKK|NP 0.126 . PKNH_1417700 13 KKNPDDK|VH 0.066 . PKNH_1417700 19 KVHSGNK|RG 0.057 . PKNH_1417700 20 VHSGNKR|GR 0.256 . PKNH_1417700 22 SGNKRGR|KK 0.128 . PKNH_1417700 23 GNKRGRK|KK 0.190 . PKNH_1417700 24 NKRGRKK|KE 0.121 . PKNH_1417700 25 KRGRKKK|ES 0.526 *ProP* PKNH_1417700 34 LSEEVEK|MD 0.076 . PKNH_1417700 42 DGNDEAK|ET 0.087 . PKNH_1417700 68 TSLTDER|RL 0.079 . PKNH_1417700 69 SLTDERR|LI 0.119 . PKNH_1417700 73 ERRLIPR|GA 0.227 . PKNH_1417700 77 IPRGAGR|GR 0.122 . PKNH_1417700 79 RGAGRGR|GR 0.074 . PKNH_1417700 81 AGRGRGR|VC 0.077 . PKNH_1417700 87 RVCPYLR|TI 0.092 . PKNH_1417700 91 YLRTINR|NL 0.081 . PKNH_1417700 100 LDFDFEK|LC 0.067 . PKNH_1417700 126 YFQGIGK|GT 0.073 . PKNH_1417700 137 YTHALEK|NH 0.060 . PKNH_1417700 149 INLETCK|TC 0.058 . PKNH_1417700 168 ASLNDIK|YF 0.059 . PKNH_1417700 172 DIKYFLK|PT 0.061 . PKNH_1417700 177 LKPTYSR|DQ 0.084 . PKNH_1417700 185 QVEYICR|NS 0.071 . PKNH_1417700 191 RNSILGK|SL 0.146 . PKNH_1417700 209 VGLNNLK|HT 0.060 . PKNH_1417700 228 CSIIPLR|NF 0.080 . PKNH_1417700 237 FLVFENK|KY 0.057 . PKNH_1417700 238 LVFENKK|YV 0.163 . PKNH_1417700 242 NKKYVSK|NI 0.069 . PKNH_1417700 253 SLSELIK|KI 0.070 . PKNH_1417700 254 LSELIKK|IF 0.083 . PKNH_1417700 259 KKIFNPR|NF 0.092 . PKNH_1417700 262 FNPRNFK|GV 0.122 . PKNH_1417700 279 TVGIESK|KT 0.069 . PKNH_1417700 280 VGIESKK|TF 0.084 . PKNH_1417700 283 ESKKTFK|IG 0.065 . PKNH_1417700 287 TFKIGSK|ND 0.054 . PKNH_1417700 300 FLWLISK|IH 0.059 . PKNH_1417700 303 LISKIHR|YQ 0.128 . PKNH_1417700 307 IHRYQER|AL 0.153 . PKNH_1417700 310 YQERALR|KG 0.183 . PKNH_1417700 311 QERALRK|GT 0.095 . PKNH_1417700 314 ALRKGTK|SM 0.086 . PKNH_1417700 319 TKSMMGK|KR 0.073 . PKNH_1417700 320 KSMMGKK|RK 0.082 . PKNH_1417700 321 SMMGKKR|KI 0.412 . PKNH_1417700 322 MMGKKRK|IS 0.135 . PKNH_1417700 325 KKRKISK|SG 0.094 . PKNH_1417700 329 ISKSGEK|DK 0.071 . PKNH_1417700 331 KSGEKDK|RA 0.084 . PKNH_1417700 332 SGEKDKR|AD 0.311 . PKNH_1417700 342 QSGEQNK|RQ 0.071 . PKNH_1417700 343 SGEQNKR|QE 0.229 . PKNH_1417700 359 VDDEEGK|IQ 0.056 . PKNH_1417700 394 GIDLPTK|RK 0.058 . PKNH_1417700 395 IDLPTKR|KK 0.147 . PKNH_1417700 396 DLPTKRK|KK 0.077 . PKNH_1417700 397 LPTKRKK|KK 0.104 . PKNH_1417700 398 PTKRKKK|KK 0.311 . PKNH_1417700 399 TKRKKKK|KK 0.149 . PKNH_1417700 400 KRKKKKK|KK 0.167 . PKNH_1417700 401 RKKKKKK|KK 0.162 . PKNH_1417700 402 KKKKKKK|KW 0.116 . PKNH_1417700 403 KKKKKKK|WK 0.192 . PKNH_1417700 405 KKKKKWK|YD 0.082 . PKNH_1417700 408 KKWKYDK|VN 0.059 . PKNH_1417700 423 DGELIIK|TK 0.055 . PKNH_1417700 425 ELIIKTK|KK 0.065 . PKNH_1417700 426 LIIKTKK|KK 0.083 . PKNH_1417700 427 IIKTKKK|KK 0.110 . PKNH_1417700 428 IKTKKKK|KK 0.125 . PKNH_1417700 429 KTKKKKK|KK 0.133 . PKNH_1417700 430 TKKKKKK|KS 0.224 . PKNH_1417700 431 KKKKKKK|SS 0.369 . PKNH_1417700 446 SSTHNTK|KR 0.064 . PKNH_1417700 447 STHNTKK|RE 0.086 . PKNH_1417700 448 THNTKKR|EK 0.308 . PKNH_1417700 450 NTKKREK|ND 0.064 . PKNH_1417700 457 NDTYHER|NA 0.106 . PKNH_1417700 460 YHERNAR|ED 0.272 . PKNH_1417700 464 NAREDGK|FS 0.071 . PKNH_1417700 499 EELNEEK|NY 0.054 . PKNH_1417700 505 KNYVTEK|IP 0.065 . PKNH_1417700 509 TEKIPFR|TL 0.111 . PKNH_1417700 514 FRTLSLK|LP 0.059 . PKNH_1417700 522 PNPPIFK|ST 0.076 . PKNH_1417700 541 IFELLTK|FD 0.071 . PKNH_1417700 553 ESFLNEK|SE 0.066 . PKNH_1417700 563 STLILSK|LP 0.057 . PKNH_1417700 566 ILSKLPK|YL 0.074 . PKNH_1417700 573 YLVFTIK|RF 0.067 . PKNH_1417700 574 LVFTIKR|FS 0.172 . PKNH_1417700 577 TIKRFSK|NN 0.163 . PKNH_1417700 584 NNFFVEK|NG 0.066 . PKNH_1417700 594 IVNFVIK|NL 0.070 . PKNH_1417700 599 IKNLDMK|DY 0.078 . PKNH_1417700 609 HEDYLEK|NP 0.054 . PKNH_1417700 614 EKNPVTK|YN 0.073 . PKNH_1417700 633 VNNGTYK|IH 0.060 . PKNH_1417700 672 CVQLYQR|QD 0.079 . ____________________________^_________________
  • Fasta :-

    >PKNH_1417700 ATGGAAAAGAAAGGGAGAAAGAAGAACCCAGATGACAAGGTTCATTCTGGTAACAAACGG GGGAGGAAGAAAAAGGAGAGTTTATCGGAGGAGGTGGAAAAAATGGACGGGAACGATGAG GCGAAGGAGACAGATCAAGCTGGAGAGGCCAATCAGACAATCCCGACAGAGGCCACCAAT GTAACCTCTTTAACGGACGAACGACGCCTTATCCCGAGGGGCGCGGGCAGAGGGAGGGGC AGGGTTTGCCCATATCTGCGTACCATCAACAGAAACTTATTGGACTTTGATTTCGAAAAG TTGTGCAGCATCAGCATGTCCAACCTTCACGTATACGCATGCCTAGTTTGTGGGGTTTAC TTCCAAGGAATAGGAAAAGGAACACACGCATACACACATGCACTGGAAAAAAACCATTAC GTCTTCATCAATTTGGAAACATGCAAAACTTGTTGCCTTCCAGAAAATTACGAAATAGAA GATGCATCTCTAAATGATATAAAATATTTTCTAAAACCCACGTATAGTAGAGATCAAGTA GAATACATTTGTCGTAATTCTATTTTGGGAAAATCGCTAGACGGAGCAGATTTCTTTCCT GGATTTGTAGGACTCAATAATTTAAAACATACTGACTACTGCAATGTTATTATTCAGCTT GTGTGTAGTATTATTCCATTAAGGAACTTTTTTTTAGTATTCGAAAATAAGAAATATGTC AGCAAAAATATCGTTTCCTCTTTATCAGAATTGATTAAAAAAATTTTTAACCCTCGAAAT TTCAAGGGCGTTGTTTCTCCACATGAGTTCCTACAAACAGTGGGTATTGAATCCAAGAAA ACCTTCAAAATTGGATCTAAAAATGATCCGCTAGATTTTTTCCTCTGGCTAATTAGTAAA ATACATAGGTATCAAGAGAGGGCGCTGCGGAAGGGTACTAAAAGTATGATGGGGAAGAAG AGGAAAATTAGTAAAAGTGGAGAAAAGGATAAAAGGGCGGATGGTCAATCGGGCGAACAA AATAAAAGACAGGAAGAGGATGAAGAAGATGAAGAGGTGGACGATGAAGAAGGCAAAATT CAACCTGGACACCACCTCTCGCAGTTGAATGCTATGTTGTCTTCCTCCAGCGAGTCATAC ATGTCGGAAGAAGCTGTCCCTGGTATAGATTTACCAACGAAAAGGAAAAAGAAAAAAAAA AAAAAAAAATGGAAGTACGACAAGGTAAACATTATCGACTATTGCTTTGATGGGGAATTA ATTATCAAAACGAAAAAAAAAAAAAAAAAAAAAAGTTCCGAAGGAGATGAAAATATGAGC AGTACGCATAATACAAAAAAGAGAGAAAAGAATGATACGTACCATGAACGGAATGCACGT GAAGATGGCAAATTTTCTAACCACTTGAATAATGAAGGAGGAGTGGAGAATGACATGAGC AATTCGGACGAGGATGATACAGACTTGCAGGATGGAGAAGAATTGAACGAAGAAAAAAAT TACGTAACAGAAAAAATTCCATTTCGAACACTTTCCTTGAAGTTGCCCAACCCACCCATT TTTAAAAGCACAACAGAAAGTAACATCATACCACAGGTATCCATTTTCGAGCTCTTGACA AAATTTGATGGAGAAACGGAATCCTTTTTAAATGAGAAATCGGAGCCAAGCACTTTAATC CTTTCCAAGTTACCTAAATATTTAGTGTTTACCATTAAGAGGTTTTCTAAAAATAATTTT TTTGTCGAAAAAAATGGCACCATTGTTAATTTTGTCATAAAAAACTTAGACATGAAGGAT TATATACATGAAGATTATCTGGAGAAAAATCCTGTGACCAAGTATAACTTAATTGCTAAT ATTTTTCACAGTGGCTCCGTTAACAATGGCACCTACAAAATCCATGTCCTCAACCAGGCG TCCAATGAGTGGTATGAAATGGAGGATCTGCACGTGATTACCGTTTTGCCGCAGCTAGTT CTCCTACCCGAGTCTTGTGTGCAGTTGTATCAGCGCCAAGATGTGCAACTCAACGGGGAG GTCCCCTAA
  • Download Fasta
  • Fasta :-

    MEKKGRKKNPDDKVHSGNKRGRKKKESLSEEVEKMDGNDEAKETDQAGEANQTIPTEATN VTSLTDERRLIPRGAGRGRGRVCPYLRTINRNLLDFDFEKLCSISMSNLHVYACLVCGVY FQGIGKGTHAYTHALEKNHYVFINLETCKTCCLPENYEIEDASLNDIKYFLKPTYSRDQV EYICRNSILGKSLDGADFFPGFVGLNNLKHTDYCNVIIQLVCSIIPLRNFFLVFENKKYV SKNIVSSLSELIKKIFNPRNFKGVVSPHEFLQTVGIESKKTFKIGSKNDPLDFFLWLISK IHRYQERALRKGTKSMMGKKRKISKSGEKDKRADGQSGEQNKRQEEDEEDEEVDDEEGKI QPGHHLSQLNAMLSSSSESYMSEEAVPGIDLPTKRKKKKKKKKWKYDKVNIIDYCFDGEL IIKTKKKKKKKSSEGDENMSSTHNTKKREKNDTYHERNAREDGKFSNHLNNEGGVENDMS NSDEDDTDLQDGEELNEEKNYVTEKIPFRTLSLKLPNPPIFKSTTESNIIPQVSIFELLT KFDGETESFLNEKSEPSTLILSKLPKYLVFTIKRFSKNNFFVEKNGTIVNFVIKNLDMKD YIHEDYLEKNPVTKYNLIANIFHSGSVNNGTYKIHVLNQASNEWYEMEDLHVITVLPQLV LLPESCVQLYQRQDVQLNGEVP

  • title: Active Site
  • coordinates: N207,D212,T631,D649
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1417700266 SKGVVSPHEF0.992unspPKNH_1417700266 SKGVVSPHEF0.992unspPKNH_1417700266 SKGVVSPHEF0.992unspPKNH_1417700324 SKRKISKSGE0.996unspPKNH_1417700326 SKISKSGEKD0.996unspPKNH_1417700379 SSSSESYMSE0.992unspPKNH_1417700382 SESYMSEEAV0.99unspPKNH_1417700432 SKKKKSSEGD0.997unspPKNH_1417700433 SKKKSSEGDE0.997unspPKNH_1417700482 SDMSNSDEDD0.993unspPKNH_1417700576 SIKRFSKNNF0.994unspPKNH_141770027 SKKKESLSEE0.997unspPKNH_141770029 SKESLSEEVE0.995unsp

PK13_1650w      PKH_141620      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India