PVX_001075 | ubiquitin specific protease, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_001075OTHER0.9999260.0000140.000060
No Results

  • Fasta :-

    >PVX_001075 MNLTEHKLRDLFYTKNYKYYAKYDNHGSVQRRHTSFQNNGNVCYCNASLQLLLSIKPLCI YLLNKFDQIYEKTKSKSKYKGDILKALFYIVEETYQVEKEYLCTERHINLLKKMKKYNST IVINAQNDAHEFLLMLLNYVNVECNRDFNFPQNFEIILDDKDSKEKASEKYWVKYLYKDN SIVTDLLGFQNVSSITCTQCGHTRHSFEFCLDLGLEFQNEHMQSTSLIDLLKSNIMKSDD FCHLFCPICKSKQNSCIKKGLYRMPNLYMIIYIKRFKWSYECTNYFKSRVKKIDTTVLLP WDGLIDFTSFAYMSSHESLSNSKYLIESFICHSGNSYNGHYTAVVKHTDGFYKCNDEKMK KLSNPFNPENISDIYLLLLRRVT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_001075.fa Sequence name : PVX_001075 Sequence length : 383 VALUES OF COMPUTED PARAMETERS Coef20 : 3.398 CoefTot : -0.012 ChDiff : 10 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.988 1.647 0.147 0.535 MesoH : -0.715 0.049 -0.417 0.129 MuHd_075 : 21.194 12.228 5.709 4.877 MuHd_095 : 22.088 17.251 6.223 3.821 MuHd_100 : 15.109 14.055 3.675 2.393 MuHd_105 : 16.178 11.548 4.394 2.684 Hmax_075 : 0.300 3.200 -2.178 2.370 Hmax_095 : 0.300 5.700 -3.258 1.710 Hmax_100 : -3.100 4.200 -3.712 1.750 Hmax_105 : -6.200 0.300 -4.605 -0.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9579 0.0421 DFMC : 0.9770 0.0230
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 383 PVX_001075 MNLTEHKLRDLFYTKNYKYYAKYDNHGSVQRRHTSFQNNGNVCYCNASLQLLLSIKPLCIYLLNKFDQIYEKTKSKSKYK 80 GDILKALFYIVEETYQVEKEYLCTERHINLLKKMKKYNSTIVINAQNDAHEFLLMLLNYVNVECNRDFNFPQNFEIILDD 160 KDSKEKASEKYWVKYLYKDNSIVTDLLGFQNVSSITCTQCGHTRHSFEFCLDLGLEFQNEHMQSTSLIDLLKSNIMKSDD 240 FCHLFCPICKSKQNSCIKKGLYRMPNLYMIIYIKRFKWSYECTNYFKSRVKKIDTTVLLPWDGLIDFTSFAYMSSHESLS 320 NSKYLIESFICHSGNSYNGHYTAVVKHTDGFYKCNDEKMKKLSNPFNPENISDIYLLLLRRVT 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................................P............................ 320 ............................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_001075 7 MNLTEHK|LR 0.053 . PVX_001075 9 LTEHKLR|DL 0.117 . PVX_001075 15 RDLFYTK|NY 0.053 . PVX_001075 18 FYTKNYK|YY 0.061 . PVX_001075 22 NYKYYAK|YD 0.070 . PVX_001075 31 NHGSVQR|RH 0.077 . PVX_001075 32 HGSVQRR|HT 0.304 . PVX_001075 56 QLLLSIK|PL 0.064 . PVX_001075 65 CIYLLNK|FD 0.071 . PVX_001075 72 FDQIYEK|TK 0.061 . PVX_001075 74 QIYEKTK|SK 0.099 . PVX_001075 76 YEKTKSK|SK 0.084 . PVX_001075 78 KTKSKSK|YK 0.093 . PVX_001075 80 KSKSKYK|GD 0.066 . PVX_001075 85 YKGDILK|AL 0.071 . PVX_001075 99 ETYQVEK|EY 0.059 . PVX_001075 106 EYLCTER|HI 0.083 . PVX_001075 112 RHINLLK|KM 0.061 . PVX_001075 113 HINLLKK|MK 0.097 . PVX_001075 115 NLLKKMK|KY 0.063 . PVX_001075 116 LLKKMKK|YN 0.151 . PVX_001075 146 VNVECNR|DF 0.084 . PVX_001075 161 EIILDDK|DS 0.060 . PVX_001075 164 LDDKDSK|EK 0.058 . PVX_001075 166 DKDSKEK|AS 0.062 . PVX_001075 170 KEKASEK|YW 0.067 . PVX_001075 174 SEKYWVK|YL 0.068 . PVX_001075 178 WVKYLYK|DN 0.079 . PVX_001075 204 TQCGHTR|HS 0.093 . PVX_001075 232 SLIDLLK|SN 0.077 . PVX_001075 237 LKSNIMK|SD 0.087 . PVX_001075 250 LFCPICK|SK 0.066 . PVX_001075 252 CPICKSK|QN 0.078 . PVX_001075 258 KQNSCIK|KG 0.059 . PVX_001075 259 QNSCIKK|GL 0.146 . PVX_001075 263 IKKGLYR|MP 0.078 . PVX_001075 274 YMIIYIK|RF 0.056 . PVX_001075 275 MIIYIKR|FK 0.221 . PVX_001075 277 IYIKRFK|WS 0.064 . PVX_001075 287 ECTNYFK|SR 0.072 . PVX_001075 289 TNYFKSR|VK 0.102 . PVX_001075 291 YFKSRVK|KI 0.063 . PVX_001075 292 FKSRVKK|ID 0.509 *ProP* PVX_001075 323 ESLSNSK|YL 0.062 . PVX_001075 346 HYTAVVK|HT 0.065 . PVX_001075 353 HTDGFYK|CN 0.070 . PVX_001075 358 YKCNDEK|MK 0.059 . PVX_001075 360 CNDEKMK|KL 0.069 . PVX_001075 361 NDEKMKK|LS 0.081 . PVX_001075 380 IYLLLLR|RV 0.077 . PVX_001075 381 YLLLLRR|VT 0.091 . ____________________________^_________________

  • Fasta :-

    >PVX_001075 GACGTGGTTGAAAAAAGAAAAAAGCGTCAAGTGGAAGTGGAAAGGGTTGGAGCATCCTCG TTTTTTCATTCGCCCGTCTTTGCTATGCTATGCTATGCTTTGGTTTGCTTTTTTTTTTTT TTTTTTTTTTAACCGCAGAATGGGCAACTTTAAGGGGCAATTTTAACGGCAATTTTAACG GCCGCTTTAATGGGCAATTTTAACGGGCATTTTTAACGACAATTTTAACGACAATTTTAA CGCCCCCTTTAACCCGCACACGGAAGGGCGAACTGACCCCGCTCCCATTCCACTGCGACC GAACGTAAAGGCAGCCGCGCGGAAGAAGCCTTCCCCCACAACGCAAGTAACCGCATAGGT GTACGGAGGGCGCAACTGCAAAAGAGGCACATTCTACCGAGCACCTCGCACCTCGCACCA CCCCCCCAAAATGAGACAAGATGAACCTCACTGAGCACAAGCTGCGCGATTTGTTCTACA CGAAGAATTACAAATACTACGCCAAGTATGATAATCACGGGAGTGTCCAAAGGAGGCACA CGTCCTTCCAGAACAATGGAAACGTGTGCTACTGCAACGCCTCCCTCCAACTGCTGCTCT CCATCAAACCGCTCTGCATATACCTGCTGAACAAATTTGACCAAATATACGAAAAGACGA AATCGAAATCAAAGTACAAGGGAGACATACTGAAGGCCCTCTTCTACATTGTTGAAGAAA CGTACCAAGTAGAAAAGGAGTACTTATGCACAGAAAGGCATATTAACCTTTTAAAAAAAA TGAAAAAATATAATAGCACCATAGTGATCAACGCACAAAATGATGCACACGAATTTTTGT TAATGCTACTGAACTATGTAAACGTGGAGTGCAACCGCGATTTTAATTTTCCGCAAAATT TCGAAATCATTCTGGACGATAAAGATAGCAAAGAAAAGGCATCAGAAAAGTACTGGGTAA AATATCTCTACAAGGATAACAGCATAGTGACAGACCTTTTAGGGTTCCAAAATGTCTCTA GCATCACTTGCACCCAGTGTGGACACACAAGACACAGTTTTGAATTTTGCCTAGACTTAG GGTTAGAGTTTCAGAATGAACACATGCAAAGTACCTCCCTGATTGATTTACTAAAGAGTA ACATCATGAAGAGTGACGATTTTTGCCACTTATTTTGCCCCATCTGTAAATCCAAACAAA ATAGCTGCATTAAAAAAGGCCTCTACAGAATGCCCAACTTGTATATGATTATTTATATCA AACGATTTAAGTGGAGTTACGAGTGCACCAATTATTTCAAAAGTAGAGTGAAAAAAATTG ACACTACTGTGTTGCTGCCATGGGATGGGTTAATTGATTTTACATCCTTTGCCTACATGT CCAGCCATGAGTCTTTATCTAACTCGAAGTACCTCATCGAGAGCTTCATTTGTCACAGCG GCAACAGCTACAATGGGCACTACACAGCCGTCGTTAAGCACACCGATGGGTTCTACAAGT GCAATGATGAAAAAATGAAAAAACTCAGTAACCCCTTTAACCCCGAAAATATTAGCGACA TTTACCTGCTCCTACTTAGGAGGGTCACCTAG
  • Download Fasta

  • Fasta :-

    MNLTEHKLRDLFYTKNYKYYAKYDNHGSVQRRHTSFQNNGNVCYCNASLQLLLSIKPLCI YLLNKFDQIYEKTKSKSKYKGDILKALFYIVEETYQVEKEYLCTERHINLLKKMKKYNST IVINAQNDAHEFLLMLLNYVNVECNRDFNFPQNFEIILDDKDSKEKASEKYWVKYLYKDN SIVTDLLGFQNVSSITCTQCGHTRHSFEFCLDLGLEFQNEHMQSTSLIDLLKSNIMKSDD FCHLFCPICKSKQNSCIKKGLYRMPNLYMIIYIKRFKWSYECTNYFKSRVKKIDTTVLLP WDGLIDFTSFAYMSSHESLSNSKYLIESFICHSGNSYNGHYTAVVKHTDGFYKCNDEKMK KLSNPFNPENISDIYLLLLRRVT

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_00107577 STKSKSKYKG0.996unspPVX_001075168 SKEKASEKYW0.99unsp
PVX_001075      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India