PVX_003790 | serine-repeat antigen (SERA), putative

  • Computed_GO_Component_IDs:  GO:0005739      

  • Computed_GO_Components:  mitochondrion      

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_003790SP0.2954960.7016520.002852CS pos: 24-25. VKT-NI. Pr: 0.9313
No Results

  • Fasta :-

    >PVX_003790 MKINQVAQYVLFALVAHLVKRVKTNILVNCFGMLHCKICHIAIRNCFLSGTSNLTKCLQC EEKYYNIQPCTHQTENFLKTSRDKGAFVEMKDHDYLTDGKVDDLISEVVKISLERQKNAV PAAEDRNEDFHKKIMQLCLYSNFNDNYENAKKHTQASVEEVERHIHKIINMYMRESNNME HIINSLKNPALCLKNPAEWTKDRAGYKDNDVPSVGIIPERKLFKPYEVKSLMSSLYSYKS NCNRQFCDRFSDPNECEHSIRVLNQGTCGNCWAFASSQVISAYRCRKGLGFAEPSVKYVT LCRNRHSDDYEENPLGHYNDNICREGGHLSYYLDTVDKTGMLPTSYDVPYNEPLRGADCP ESTAKWANIWEKVNPLTRILNGYLYRGYFKISFHEYARSGKTQELISLIKDYIMDQGSLF VSMEVNEKLSFDHDGEKVMMNCEYKASPDHALTLIGYGDYIKPSGEKSSYWLIRNSWGSH WGDKGNFKVDMYGPPNCNGAVLCNAFPLLLQMNGKKITKPLPKDLASTDNKVRYDHSIFN RDNNRAQSRRYNQNREQDRPNGRADNNPFDNPKYNEIYDDDDRDAPAFDPFRGDYVYPHM DNANGAERGNEGMNDNRGGKIRRKVFKTSLVVTIGDTQFKRDIFMKRKEEYKEQHSCLRT YSLDSLADVSCRNNCEQYIDLCKHYTSIGRCLMRFANNYKCVYCGM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_003790.fa Sequence name : PVX_003790 Sequence length : 706 VALUES OF COMPUTED PARAMETERS Coef20 : 4.161 CoefTot : -1.040 ChDiff : 6 ZoneTo : 60 KR : 7 DE : 0 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.953 1.524 0.113 0.561 MesoH : -0.660 0.343 -0.357 0.144 MuHd_075 : 23.349 22.347 7.166 6.582 MuHd_095 : 32.944 29.052 11.187 8.396 MuHd_100 : 28.011 24.497 10.323 7.363 MuHd_105 : 20.251 18.739 8.505 5.911 Hmax_075 : 18.667 13.800 5.493 7.460 Hmax_095 : 16.625 26.250 5.848 5.670 Hmax_100 : 19.100 27.500 6.416 7.110 Hmax_105 : 15.500 25.317 7.502 6.780 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1684 0.8316 DFMC : 0.2741 0.7259 This protein is probably imported in mitochondria. f(Ser) = 0.0333 f(Arg) = 0.0333 CMi = 0.28571 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 706 PVX_003790 MKINQVAQYVLFALVAHLVKRVKTNILVNCFGMLHCKICHIAIRNCFLSGTSNLTKCLQCEEKYYNIQPCTHQTENFLKT 80 SRDKGAFVEMKDHDYLTDGKVDDLISEVVKISLERQKNAVPAAEDRNEDFHKKIMQLCLYSNFNDNYENAKKHTQASVEE 160 VERHIHKIINMYMRESNNMEHIINSLKNPALCLKNPAEWTKDRAGYKDNDVPSVGIIPERKLFKPYEVKSLMSSLYSYKS 240 NCNRQFCDRFSDPNECEHSIRVLNQGTCGNCWAFASSQVISAYRCRKGLGFAEPSVKYVTLCRNRHSDDYEENPLGHYND 320 NICREGGHLSYYLDTVDKTGMLPTSYDVPYNEPLRGADCPESTAKWANIWEKVNPLTRILNGYLYRGYFKISFHEYARSG 400 KTQELISLIKDYIMDQGSLFVSMEVNEKLSFDHDGEKVMMNCEYKASPDHALTLIGYGDYIKPSGEKSSYWLIRNSWGSH 480 WGDKGNFKVDMYGPPNCNGAVLCNAFPLLLQMNGKKITKPLPKDLASTDNKVRYDHSIFNRDNNRAQSRRYNQNREQDRP 560 NGRADNNPFDNPKYNEIYDDDDRDAPAFDPFRGDYVYPHMDNANGAERGNEGMNDNRGGKIRRKVFKTSLVVTIGDTQFK 640 RDIFMKRKEEYKEQHSCLRTYSLDSLADVSCRNNCEQYIDLCKHYTSIGRCLMRFANNYKCVYCGM 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .................................................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_003790 2 -----MK|IN 0.066 . PVX_003790 20 LVAHLVK|RV 0.067 . PVX_003790 21 VAHLVKR|VK 0.196 . PVX_003790 23 HLVKRVK|TN 0.060 . PVX_003790 37 FGMLHCK|IC 0.067 . PVX_003790 44 ICHIAIR|NC 0.100 . PVX_003790 56 GTSNLTK|CL 0.076 . PVX_003790 63 CLQCEEK|YY 0.076 . PVX_003790 79 QTENFLK|TS 0.069 . PVX_003790 82 NFLKTSR|DK 0.113 . PVX_003790 84 LKTSRDK|GA 0.079 . PVX_003790 91 GAFVEMK|DH 0.078 . PVX_003790 100 DYLTDGK|VD 0.052 . PVX_003790 110 LISEVVK|IS 0.064 . PVX_003790 115 VKISLER|QK 0.090 . PVX_003790 117 ISLERQK|NA 0.066 . PVX_003790 126 VPAAEDR|NE 0.085 . PVX_003790 132 RNEDFHK|KI 0.071 . PVX_003790 133 NEDFHKK|IM 0.086 . PVX_003790 151 DNYENAK|KH 0.065 . PVX_003790 152 NYENAKK|HT 0.102 . PVX_003790 163 SVEEVER|HI 0.128 . PVX_003790 167 VERHIHK|II 0.072 . PVX_003790 174 IINMYMR|ES 0.130 . PVX_003790 187 HIINSLK|NP 0.057 . PVX_003790 194 NPALCLK|NP 0.057 . PVX_003790 201 NPAEWTK|DR 0.072 . PVX_003790 203 AEWTKDR|AG 0.091 . PVX_003790 207 KDRAGYK|DN 0.072 . PVX_003790 220 VGIIPER|KL 0.081 . PVX_003790 221 GIIPERK|LF 0.082 . PVX_003790 224 PERKLFK|PY 0.071 . PVX_003790 229 FKPYEVK|SL 0.080 . PVX_003790 239 SSLYSYK|SN 0.081 . PVX_003790 244 YKSNCNR|QF 0.117 . PVX_003790 249 NRQFCDR|FS 0.160 . PVX_003790 261 ECEHSIR|VL 0.108 . PVX_003790 284 QVISAYR|CR 0.077 . PVX_003790 286 ISAYRCR|KG 0.075 . PVX_003790 287 SAYRCRK|GL 0.434 . PVX_003790 297 FAEPSVK|YV 0.074 . PVX_003790 303 KYVTLCR|NR 0.066 . PVX_003790 305 VTLCRNR|HS 0.096 . PVX_003790 324 YNDNICR|EG 0.076 . PVX_003790 338 YLDTVDK|TG 0.051 . PVX_003790 355 PYNEPLR|GA 0.118 . PVX_003790 365 CPESTAK|WA 0.085 . PVX_003790 372 WANIWEK|VN 0.059 . PVX_003790 378 KVNPLTR|IL 0.093 . PVX_003790 386 LNGYLYR|GY 0.118 . PVX_003790 390 LYRGYFK|IS 0.063 . PVX_003790 398 SFHEYAR|SG 0.184 . PVX_003790 401 EYARSGK|TQ 0.105 . PVX_003790 410 ELISLIK|DY 0.066 . PVX_003790 428 SMEVNEK|LS 0.060 . PVX_003790 437 FDHDGEK|VM 0.058 . PVX_003790 445 MMNCEYK|AS 0.071 . PVX_003790 462 GYGDYIK|PS 0.061 . PVX_003790 467 IKPSGEK|SS 0.070 . PVX_003790 474 SSYWLIR|NS 0.127 . PVX_003790 484 GSHWGDK|GN 0.081 . PVX_003790 488 GDKGNFK|VD 0.063 . PVX_003790 515 LLQMNGK|KI 0.071 . PVX_003790 516 LQMNGKK|IT 0.093 . PVX_003790 519 NGKKITK|PL 0.065 . PVX_003790 523 ITKPLPK|DL 0.069 . PVX_003790 531 LASTDNK|VR 0.058 . PVX_003790 533 STDNKVR|YD 0.099 . PVX_003790 541 DHSIFNR|DN 0.141 . PVX_003790 545 FNRDNNR|AQ 0.089 . PVX_003790 549 NNRAQSR|RY 0.108 . PVX_003790 550 NRAQSRR|YN 0.220 . PVX_003790 555 RRYNQNR|EQ 0.107 . PVX_003790 559 QNREQDR|PN 0.124 . PVX_003790 563 QDRPNGR|AD 0.087 . PVX_003790 573 NPFDNPK|YN 0.074 . PVX_003790 583 IYDDDDR|DA 0.083 . PVX_003790 592 PAFDPFR|GD 0.093 . PVX_003790 608 NANGAER|GN 0.105 . PVX_003790 617 EGMNDNR|GG 0.076 . PVX_003790 620 NDNRGGK|IR 0.149 . PVX_003790 622 NRGGKIR|RK 0.095 . PVX_003790 623 RGGKIRR|KV 0.207 . PVX_003790 624 GGKIRRK|VF 0.084 . PVX_003790 627 IRRKVFK|TS 0.082 . PVX_003790 640 IGDTQFK|RD 0.056 . PVX_003790 641 GDTQFKR|DI 0.315 . PVX_003790 646 KRDIFMK|RK 0.079 . PVX_003790 647 RDIFMKR|KE 0.228 . PVX_003790 648 DIFMKRK|EE 0.089 . PVX_003790 652 KRKEEYK|EQ 0.076 . PVX_003790 659 EQHSCLR|TY 0.074 . PVX_003790 672 LADVSCR|NN 0.095 . PVX_003790 683 QYIDLCK|HY 0.065 . PVX_003790 690 HYTSIGR|CL 0.073 . PVX_003790 694 IGRCLMR|FA 0.119 . PVX_003790 700 RFANNYK|CV 0.083 . ____________________________^_________________

  • Fasta :-

    >PVX_003790 ATGAAGATAAATCAGGTCGCGCAGTACGTCCTGTTCGCCCTGGTTGCCCATTTGGTGAAG AGAGTCAAGACCAACATCCTAGTGAACTGCTTCGGCATGCTGCACTGCAAAATATGCCAC ATAGCCATACGGAACTGCTTCCTATCTGGGACGAGCAACTTGACAAAGTGTTTGCAGTGC GAGGAGAAGTACTATAACATTCAGCCGTGTACCCACCAGACAGAAAACTTCCTGAAGACC TCCAGGGACAAGGGAGCCTTCGTGGAGATGAAGGACCATGACTACCTAACGGATGGCAAG GTAGACGACCTCATTTCCGAAGTCGTAAAGATATCACTGGAGAGGCAGAAAAATGCAGTG CCGGCAGCAGAAGACAGGAACGAAGATTTCCACAAGAAAATCATGCAGCTCTGTTTGTAC TCCAATTTTAATGATAACTACGAAAATGCGAAGAAGCACACACAGGCAAGTGTAGAAGAG GTAGAAAGGCACATACATAAAATTATTAACATGTACATGCGGGAGAGTAACAACATGGAG CATATTATTAACTCGCTGAAGAACCCAGCGCTGTGTCTGAAAAATCCTGCAGAGTGGACG AAGGACAGGGCGGGCTACAAGGACAACGATGTGCCTTCGGTAGGCATCATCCCAGAGAGG AAGCTGTTCAAGCCCTACGAGGTGAAGTCCCTCATGAGCTCCCTTTACAGCTACAAGTCG AATTGCAACCGGCAATTCTGCGATAGATTCTCGGACCCCAACGAGTGCGAACACAGCATC CGGGTCCTCAACCAGGGGACATGTGGAAACTGCTGGGCCTTCGCCTCCTCGCAAGTAATC TCCGCCTACAGGTGCAGGAAGGGTCTAGGCTTCGCGGAGCCCTCCGTCAAGTACGTCACG CTCTGCAGAAACAGGCACTCGGATGACTACGAAGAAAACCCCTTAGGCCACTACAACGAT AACATTTGTAGAGAAGGGGGACATCTCTCATACTACCTGGATACCGTAGACAAAACGGGG ATGCTTCCTACCTCCTACGACGTCCCATATAACGAACCTTTGAGAGGGGCAGACTGTCCT GAGTCCACTGCCAAATGGGCAAACATTTGGGAGAAGGTCAACCCATTAACTAGAATTCTA AATGGGTACCTATACCGAGGGTATTTCAAAATCTCCTTTCATGAGTATGCAAGAAGTGGA AAGACGCAAGAGCTTATTAGCTTAATTAAGGACTACATAATGGACCAGGGGTCCTTGTTC GTTTCCATGGAGGTGAATGAGAAGCTAAGTTTCGACCATGATGGGGAGAAGGTCATGATG AACTGCGAATATAAAGCATCTCCTGACCATGCCTTGACGTTAATAGGATATGGTGATTAT ATAAAACCTTCTGGAGAGAAAAGCTCCTACTGGTTAATCAGAAACAGCTGGGGCTCTCAC TGGGGAGACAAAGGAAACTTTAAAGTTGACATGTATGGTCCTCCCAATTGTAACGGTGCA GTGCTGTGCAATGCCTTCCCTTTATTGCTCCAAATGAATGGGAAGAAAATTACCAAGCCG CTTCCTAAAGACTTAGCCTCTACAGACAACAAGGTCCGCTACGATCACTCAATCTTTAAT AGAGACAATAACAGAGCGCAGTCCAGGAGGTACAACCAGAATAGAGAACAGGACCGACCC AATGGCCGGGCAGATAACAACCCCTTTGATAACCCCAAGTATAATGAAATATATGATGAC GATGACAGGGACGCGCCAGCTTTTGATCCCTTCAGGGGGGACTACGTCTACCCCCACATG GATAATGCCAACGGCGCGGAGCGCGGCAACGAGGGCATGAATGACAACCGCGGAGGAAAA ATCCGCCGAAAGGTGTTCAAGACCTCCCTCGTCGTCACCATCGGGGACACGCAGTTCAAG CGGGACATCTTCATGAAAAGAAAGGAAGAGTACAAGGAGCAGCACTCCTGCCTGAGGACC TACTCCCTGGATTCCCTGGCAGACGTCTCCTGCAGGAACAACTGCGAGCAGTATATTGAC CTGTGCAAGCACTACACGTCCATCGGCAGGTGCCTCATGCGCTTTGCGAACAACTATAAG TGCGTCTACTGTGGAATGTGA
  • Download Fasta

  • Fasta :-

    MKINQVAQYVLFALVAHLVKRVKTNILVNCFGMLHCKICHIAIRNCFLSGTSNLTKCLQC EEKYYNIQPCTHQTENFLKTSRDKGAFVEMKDHDYLTDGKVDDLISEVVKISLERQKNAV PAAEDRNEDFHKKIMQLCLYSNFNDNYENAKKHTQASVEEVERHIHKIINMYMRESNNME HIINSLKNPALCLKNPAEWTKDRAGYKDNDVPSVGIIPERKLFKPYEVKSLMSSLYSYKS NCNRQFCDRFSDPNECEHSIRVLNQGTCGNCWAFASSQVISAYRCRKGLGFAEPSVKYVT LCRNRHSDDYEENPLGHYNDNICREGGHLSYYLDTVDKTGMLPTSYDVPYNEPLRGADCP ESTAKWANIWEKVNPLTRILNGYLYRGYFKISFHEYARSGKTQELISLIKDYIMDQGSLF VSMEVNEKLSFDHDGEKVMMNCEYKASPDHALTLIGYGDYIKPSGEKSSYWLIRNSWGSH WGDKGNFKVDMYGPPNCNGAVLCNAFPLLLQMNGKKITKPLPKDLASTDNKVRYDHSIFN RDNNRAQSRRYNQNREQDRPNGRADNNPFDNPKYNEIYDDDDRDAPAFDPFRGDYVYPHM DNANGAERGNEGMNDNRGGKIRRKVFKTSLVVTIGDTQFKRDIFMKRKEEYKEQHSCLRT YSLDSLADVSCRNNCEQYIDLCKHYTSIGRCLMRFANNYKCVYCGM

  • title: active site
  • coordinates: Q265,C271,H450,N475
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_003790157 SHTQASVEEV0.996unspPVX_003790157 SHTQASVEEV0.996unspPVX_003790157 SHTQASVEEV0.996unspPVX_003790237 SSSLYSYKSN0.992unspPVX_00379064 YCEEKYYNIQ0.99unspPVX_003790112 SVVKISLERQ0.991unsp
PVX_003790      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India