PVX_003810 | serine-repeat antigen 5 (SERA), putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_003810SP0.0001920.9998060.000003CS pos: 16-17. TYG-NN. Pr: 0.7545
No Results

  • Fasta :-

    >PVX_003810 MKSSVLLLLALGATYGNNVAMCTATPPSGGPDASLPNPAQPNSLPAVETLSQQGGGAPAA SSNALTAGGNVPPGSQVNSGEQGGATQLQATPKKAELQSSLLKNFTGVKVTGPCDTEVGL YLIPYIYISVNAKTDTIELSTRFPNSDNVLVQFKKEGETLTNVCEGSSEKTFKFIMHLED SILTLKWIVNPQSTTANKNKADVKKYKVPELERPITSIQVHSVLIQEDTVIYKSKDYSVK TDIPEKCEQVASACFLSGNTDIESCYTCNLLIHNEDTSDKCFDYVSSEFKNQFQDIKVKG QDDEESSEYKLAQAIDAVLSGIYKKDQNGKKELLTWGEVDPNVKEQISSYCHLLKDVDAS GSLEVHQMGSEMDIFNNLITLLQKHSEEQKATLEWKLQNPALCLKDANNWVVNKKGLLLP LLQNGGSAINFGESNHVEDVKKDNLSTYQEGPDGVIDLSVVHQNAHASSTPFTNHMFCNS DYCDRAKDTSSCMAKIEVQDQGDCSTSWLFASKVHLEAIKCMKGHDHVGASALYVANCSN KEAKDKCHSPSNPLEFLNTLEETKFLPAESDLPYSYKAVNNVCPEPKSHWKNLWENVKLL GPTNEPNSVSVKGYTAYLSDHFKGNMDAFIKSVKSQVMSKGSVIAYVKADDQMSYDLNGK KILSLCGSETPDLAVNIVGYGNYITAEGQKKSYWLLQNSWGKHWGDKGTFKVDMHGSAHC QHNFIHTAVVFNLDVPLSQSPAKDTELYSYHLKSSPDFYKNLYYNAVGGEKGSVLSNAVQ GQDTPQEEGTSPGTAAEGEGRPGPVGPGGQQPQEHASSAGGPNSNEQQLDVARQQQQEGA EKESSQQLPQQQPLTQSQQSTQPGVGGAASTPLSQGTPGQANSNGEAENANISQIIHVLK HIKKTKMVTRIVTYEGEYDLGDHSCSRTQASSLEKLDDCIKFCNDNLSMCERTVSTGYCL TKLRKANDCIFCFV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_003810.fa Sequence name : PVX_003810 Sequence length : 974 VALUES OF COMPUTED PARAMETERS Coef20 : 4.189 CoefTot : -5.712 ChDiff : -28 ZoneTo : 114 KR : 5 DE : 4 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.194 1.465 0.144 0.577 MesoH : 0.249 0.122 -0.190 0.254 MuHd_075 : 32.514 21.034 10.266 7.396 MuHd_095 : 25.364 21.784 8.553 5.638 MuHd_100 : 26.103 18.933 7.505 5.303 MuHd_105 : 28.420 20.210 7.667 6.065 Hmax_075 : 4.500 12.200 -1.000 3.068 Hmax_095 : 4.463 10.675 -0.565 3.160 Hmax_100 : 8.600 13.000 -0.076 2.940 Hmax_105 : 1.750 14.467 -2.039 2.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9987 0.0013 DFMC : 0.9950 0.0050
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 974 PVX_003810 MKSSVLLLLALGATYGNNVAMCTATPPSGGPDASLPNPAQPNSLPAVETLSQQGGGAPAASSNALTAGGNVPPGSQVNSG 80 EQGGATQLQATPKKAELQSSLLKNFTGVKVTGPCDTEVGLYLIPYIYISVNAKTDTIELSTRFPNSDNVLVQFKKEGETL 160 TNVCEGSSEKTFKFIMHLEDSILTLKWIVNPQSTTANKNKADVKKYKVPELERPITSIQVHSVLIQEDTVIYKSKDYSVK 240 TDIPEKCEQVASACFLSGNTDIESCYTCNLLIHNEDTSDKCFDYVSSEFKNQFQDIKVKGQDDEESSEYKLAQAIDAVLS 320 GIYKKDQNGKKELLTWGEVDPNVKEQISSYCHLLKDVDASGSLEVHQMGSEMDIFNNLITLLQKHSEEQKATLEWKLQNP 400 ALCLKDANNWVVNKKGLLLPLLQNGGSAINFGESNHVEDVKKDNLSTYQEGPDGVIDLSVVHQNAHASSTPFTNHMFCNS 480 DYCDRAKDTSSCMAKIEVQDQGDCSTSWLFASKVHLEAIKCMKGHDHVGASALYVANCSNKEAKDKCHSPSNPLEFLNTL 560 EETKFLPAESDLPYSYKAVNNVCPEPKSHWKNLWENVKLLGPTNEPNSVSVKGYTAYLSDHFKGNMDAFIKSVKSQVMSK 640 GSVIAYVKADDQMSYDLNGKKILSLCGSETPDLAVNIVGYGNYITAEGQKKSYWLLQNSWGKHWGDKGTFKVDMHGSAHC 720 QHNFIHTAVVFNLDVPLSQSPAKDTELYSYHLKSSPDFYKNLYYNAVGGEKGSVLSNAVQGQDTPQEEGTSPGTAAEGEG 800 RPGPVGPGGQQPQEHASSAGGPNSNEQQLDVARQQQQEGAEKESSQQLPQQQPLTQSQQSTQPGVGGAASTPLSQGTPGQ 880 ANSNGEAENANISQIIHVLKHIKKTKMVTRIVTYEGEYDLGDHSCSRTQASSLEKLDDCIKFCNDNLSMCERTVSTGYCL 960 TKLRKANDCIFCFV 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 .............. 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_003810 2 -----MK|SS 0.072 . PVX_003810 93 QLQATPK|KA 0.077 . PVX_003810 94 LQATPKK|AE 0.086 . PVX_003810 103 LQSSLLK|NF 0.068 . PVX_003810 109 KNFTGVK|VT 0.065 . PVX_003810 133 YISVNAK|TD 0.077 . PVX_003810 142 TIELSTR|FP 0.082 . PVX_003810 154 NVLVQFK|KE 0.065 . PVX_003810 155 VLVQFKK|EG 0.092 . PVX_003810 170 CEGSSEK|TF 0.059 . PVX_003810 173 SSEKTFK|FI 0.122 . PVX_003810 186 DSILTLK|WI 0.058 . PVX_003810 198 QSTTANK|NK 0.061 . PVX_003810 200 TTANKNK|AD 0.078 . PVX_003810 204 KNKADVK|KY 0.061 . PVX_003810 205 NKADVKK|YK 0.157 . PVX_003810 207 ADVKKYK|VP 0.071 . PVX_003810 213 KVPELER|PI 0.084 . PVX_003810 233 EDTVIYK|SK 0.081 . PVX_003810 235 TVIYKSK|DY 0.115 . PVX_003810 240 SKDYSVK|TD 0.066 . PVX_003810 246 KTDIPEK|CE 0.057 . PVX_003810 280 NEDTSDK|CF 0.062 . PVX_003810 290 YVSSEFK|NQ 0.068 . PVX_003810 297 NQFQDIK|VK 0.064 . PVX_003810 299 FQDIKVK|GQ 0.082 . PVX_003810 310 EESSEYK|LA 0.078 . PVX_003810 324 VLSGIYK|KD 0.064 . PVX_003810 325 LSGIYKK|DQ 0.117 . PVX_003810 330 KKDQNGK|KE 0.053 . PVX_003810 331 KDQNGKK|EL 0.095 . PVX_003810 344 EVDPNVK|EQ 0.054 . PVX_003810 355 SYCHLLK|DV 0.124 . PVX_003810 384 LITLLQK|HS 0.064 . PVX_003810 390 KHSEEQK|AT 0.067 . PVX_003810 396 KATLEWK|LQ 0.064 . PVX_003810 405 NPALCLK|DA 0.074 . PVX_003810 414 NNWVVNK|KG 0.054 . PVX_003810 415 NWVVNKK|GL 0.090 . PVX_003810 441 NHVEDVK|KD 0.060 . PVX_003810 442 HVEDVKK|DN 0.098 . PVX_003810 485 NSDYCDR|AK 0.091 . PVX_003810 487 DYCDRAK|DT 0.082 . PVX_003810 495 TSSCMAK|IE 0.078 . PVX_003810 513 SWLFASK|VH 0.061 . PVX_003810 520 VHLEAIK|CM 0.057 . PVX_003810 523 EAIKCMK|GH 0.077 . PVX_003810 541 VANCSNK|EA 0.085 . PVX_003810 544 CSNKEAK|DK 0.110 . PVX_003810 546 NKEAKDK|CH 0.077 . PVX_003810 564 NTLEETK|FL 0.061 . PVX_003810 577 DLPYSYK|AV 0.084 . PVX_003810 587 NVCPEPK|SH 0.083 . PVX_003810 591 EPKSHWK|NL 0.071 . PVX_003810 598 NLWENVK|LL 0.064 . PVX_003810 612 PNSVSVK|GY 0.096 . PVX_003810 623 YLSDHFK|GN 0.090 . PVX_003810 631 NMDAFIK|SV 0.103 . PVX_003810 634 AFIKSVK|SQ 0.071 . PVX_003810 640 KSQVMSK|GS 0.068 . PVX_003810 648 SVIAYVK|AD 0.060 . PVX_003810 660 SYDLNGK|KI 0.054 . PVX_003810 661 YDLNGKK|IL 0.085 . PVX_003810 690 ITAEGQK|KS 0.060 . PVX_003810 691 TAEGQKK|SY 0.153 . PVX_003810 702 LQNSWGK|HW 0.096 . PVX_003810 707 GKHWGDK|GT 0.095 . PVX_003810 711 GDKGTFK|VD 0.065 . PVX_003810 743 LSQSPAK|DT 0.085 . PVX_003810 753 LYSYHLK|SS 0.089 . PVX_003810 760 SSPDFYK|NL 0.067 . PVX_003810 771 NAVGGEK|GS 0.054 . PVX_003810 801 AAEGEGR|PG 0.084 . PVX_003810 833 QQLDVAR|QQ 0.099 . PVX_003810 842 QQEGAEK|ES 0.077 . PVX_003810 900 QIIHVLK|HI 0.071 . PVX_003810 903 HVLKHIK|KT 0.065 . PVX_003810 904 VLKHIKK|TK 0.086 . PVX_003810 906 KHIKKTK|MV 0.107 . PVX_003810 910 KTKMVTR|IV 0.148 . PVX_003810 927 GDHSCSR|TQ 0.081 . PVX_003810 935 QASSLEK|LD 0.064 . PVX_003810 941 KLDDCIK|FC 0.066 . PVX_003810 952 NLSMCER|TV 0.193 . PVX_003810 962 TGYCLTK|LR 0.061 . PVX_003810 964 YCLTKLR|KA 0.105 . PVX_003810 965 CLTKLRK|AN 0.084 . ____________________________^_________________

  • Fasta :-

    >PVX_003810 ATGAAGTCTAGTGTTCTCTTGTTGCTCGCTTTGGGTGCCACTTACGGCAACAATGTGGCG ATGTGCACAGCGACGCCGCCATCTGGAGGACCCGATGCGTCGCTACCCAATCCTGCACAA CCAAATTCTTTACCAGCGGTGGAAACATTAAGTCAACAAGGGGGTGGAGCCCCAGCAGCG AGCTCCAACGCACTCACTGCCGGGGGAAACGTTCCTCCCGGTTCCCAAGTAAATAGCGGT GAACAGGGTGGAGCGACTCAGCTTCAAGCCACCCCCAAGAAAGCCGAGCTGCAGTCCTCT CTGCTGAAGAACTTCACGGGGGTGAAGGTCACTGGCCCCTGCGACACAGAGGTAGGGCTG TACCTCATTCCCTACATCTACATTTCTGTGAATGCCAAAACGGACACCATAGAGCTGTCT ACCAGGTTCCCCAATTCGGACAATGTGCTGGTGCAATTTAAAAAGGAAGGCGAAACGTTG ACTAACGTATGTGAGGGAAGCTCCGAAAAGACGTTTAAGTTTATAATGCACCTGGAGGAC AGCATACTGACCCTCAAGTGGATCGTCAATCCGCAGAGTACCACAGCGAATAAAAACAAA GCTGACGTGAAGAAGTACAAAGTACCGGAACTGGAAAGACCCATAACTTCGATTCAAGTC CATTCAGTCCTAATCCAAGAGGACACCGTCATATACAAGAGCAAAGATTATTCCGTGAAG ACTGACATTCCAGAGAAGTGCGAACAAGTGGCCAGCGCCTGCTTCTTGAGTGGCAACACA GACATAGAGAGCTGCTACACGTGCAACCTGCTGATCCATAATGAAGACACGAGTGACAAA TGTTTCGACTACGTGTCTTCAGAATTTAAGAATCAGTTTCAGGACATTAAAGTGAAGGGA CAGGACGATGAGGAGTCGAGCGAGTACAAACTTGCGCAGGCCATCGATGCGGTGTTGAGT GGAATCTACAAAAAGGATCAGAATGGGAAGAAAGAGCTGCTCACATGGGGAGAAGTGGAC CCAAATGTGAAGGAGCAGATAAGTAGCTATTGCCATTTGCTGAAAGACGTGGACGCCAGT GGCTCTCTCGAAGTCCACCAGATGGGAAGCGAAATGGACATCTTCAATAACCTCATCACT TTGCTGCAAAAGCACTCGGAGGAACAAAAGGCAACGCTGGAATGGAAGCTGCAAAACCCA GCCCTCTGCCTCAAAGATGCGAACAACTGGGTGGTGAATAAGAAGGGATTACTGTTGCCC CTTTTGCAAAACGGTGGTAGTGCTATCAACTTTGGAGAGAGTAACCACGTGGAAGATGTG AAAAAAGACAACCTCTCAACCTACCAGGAAGGGCCTGACGGAGTTATAGACTTATCGGTC GTTCACCAAAACGCACACGCTTCTTCCACTCCGTTCACCAACCACATGTTTTGCAATTCG GACTACTGCGATAGGGCGAAGGACACTAGCAGCTGCATGGCCAAGATTGAGGTGCAGGAC CAGGGCGACTGCTCTACTTCTTGGTTGTTCGCCTCCAAGGTGCATCTGGAAGCCATCAAG TGCATGAAGGGGCACGACCACGTCGGTGCATCTGCTCTTTACGTGGCTAACTGCTCCAAC AAAGAAGCGAAGGACAAGTGTCACTCACCCTCTAACCCGCTGGAATTTTTGAACACCCTG GAGGAGACAAAATTCCTGCCAGCCGAGTCGGACCTCCCCTACTCCTACAAAGCGGTGAAT AACGTCTGCCCCGAGCCGAAGAGCCACTGGAAAAATCTATGGGAAAACGTGAAACTTCTA GGCCCCACGAATGAGCCCAACTCCGTGAGCGTCAAAGGCTACACTGCCTACCTGAGTGAC CATTTCAAGGGTAACATGGACGCGTTTATCAAATCGGTAAAATCCCAAGTGATGAGCAAA GGATCCGTCATCGCTTATGTGAAGGCAGACGATCAGATGAGCTACGACTTGAACGGGAAG AAGATCCTCTCCCTATGTGGAAGCGAAACACCCGATCTTGCCGTCAACATAGTAGGCTAC GGTAATTACATAACCGCTGAAGGGCAGAAAAAATCCTACTGGTTGCTGCAAAACAGCTGG GGTAAACACTGGGGAGACAAGGGAACCTTCAAGGTCGACATGCATGGTTCAGCTCATTGC CAGCACAACTTCATCCACACCGCCGTTGTCTTCAACCTAGACGTGCCCCTCTCCCAGTCG CCCGCCAAAGACACGGAACTGTACAGCTACCACTTGAAGAGCTCCCCCGATTTTTACAAA AATTTGTATTATAACGCAGTGGGTGGTGAGAAGGGAAGCGTGCTGAGTAACGCCGTTCAG GGGCAGGACACTCCACAGGAGGAAGGAACATCACCGGGAACAGCGGCGGAAGGAGAAGGA AGGCCTGGACCTGTCGGTCCAGGAGGACAACAACCTCAGGAGCACGCGTCTTCCGCAGGG GGTCCAAATTCGAATGAACAACAACTGGATGTAGCAAGACAACAACAACAGGAAGGAGCA GAAAAAGAGTCATCACAGCAATTACCGCAACAACAACCATTAACGCAATCACAGCAATCA ACGCAACCAGGAGTAGGGGGAGCGGCGTCCACCCCTCTTTCTCAAGGCACACCAGGGCAG GCGAACTCCAATGGAGAAGCGGAAAACGCGAATATATCCCAAATCATTCACGTTTTGAAA CACATCAAGAAGACCAAAATGGTGACGAGAATAGTGACGTACGAGGGGGAGTACGACTTG GGAGACCACTCCTGTTCGCGAACGCAAGCATCAAGTTTGGAGAAACTGGACGATTGCATT AAATTTTGCAATGACAATTTGTCTATGTGCGAAAGGACTGTTTCGACAGGGTATTGTTTA ACCAAGCTGCGAAAAGCGAACGATTGCATTTTCTGTTTCGTGTGA
  • Download Fasta

  • Fasta :-

    MKSSVLLLLALGATYGNNVAMCTATPPSGGPDASLPNPAQPNSLPAVETLSQQGGGAPAA SSNALTAGGNVPPGSQVNSGEQGGATQLQATPKKAELQSSLLKNFTGVKVTGPCDTEVGL YLIPYIYISVNAKTDTIELSTRFPNSDNVLVQFKKEGETLTNVCEGSSEKTFKFIMHLED SILTLKWIVNPQSTTANKNKADVKKYKVPELERPITSIQVHSVLIQEDTVIYKSKDYSVK TDIPEKCEQVASACFLSGNTDIESCYTCNLLIHNEDTSDKCFDYVSSEFKNQFQDIKVKG QDDEESSEYKLAQAIDAVLSGIYKKDQNGKKELLTWGEVDPNVKEQISSYCHLLKDVDAS GSLEVHQMGSEMDIFNNLITLLQKHSEEQKATLEWKLQNPALCLKDANNWVVNKKGLLLP LLQNGGSAINFGESNHVEDVKKDNLSTYQEGPDGVIDLSVVHQNAHASSTPFTNHMFCNS DYCDRAKDTSSCMAKIEVQDQGDCSTSWLFASKVHLEAIKCMKGHDHVGASALYVANCSN KEAKDKCHSPSNPLEFLNTLEETKFLPAESDLPYSYKAVNNVCPEPKSHWKNLWENVKLL GPTNEPNSVSVKGYTAYLSDHFKGNMDAFIKSVKSQVMSKGSVIAYVKADDQMSYDLNGK KILSLCGSETPDLAVNIVGYGNYITAEGQKKSYWLLQNSWGKHWGDKGTFKVDMHGSAHC QHNFIHTAVVFNLDVPLSQSPAKDTELYSYHLKSSPDFYKNLYYNAVGGEKGSVLSNAVQ GQDTPQEEGTSPGTAAEGEGRPGPVGPGGQQPQEHASSAGGPNSNEQQLDVARQQQQEGA EKESSQQLPQQQPLTQSQQSTQPGVGGAASTPLSQGTPGQANSNGEAENANISQIIHVLK HIKKTKMVTRIVTYEGEYDLGDHSCSRTQASSLEKLDDCIKFCNDNLSMCERTVSTGYCL TKLRKANDCIFCFV

    No Results
  • title: active site
  • coordinates: Q501,S507,L673,N698
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_003810635 SKSVKSQVMS0.991unspPVX_003810635 SKSVKSQVMS0.991unspPVX_003810635 SKSVKSQVMS0.991unspPVX_003810932 STQASSLEKL0.993unspPVX_003810238 SSKDYSVKTD0.992unspPVX_003810549 SDKCHSPSNP0.994unsp
PVX_003810      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India