PVX_081675 | proteasome subunit alpha type-5, putative

UniProt_ID: A5K9Z5

Computed_GO_Component_IDs: GO:0005839 GO:0019773
Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex
Computed_GO_Function_IDs: GO:0004175 GO:0004298
Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity
Computed_GO_Process_IDs: GO:0051603 GO:0006511
Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PVX_081675	OTHER	0.999312	0.000154	0.000534

No Results

Fasta :-
>PVX_081675 MFSTRSEYDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGICVNDGVILASERRIASALIE KDSVEKLLPIDDHIGCAMSGLMADARTLIDYARVECNHYKFIYNENINIKSCVELISELA LDFSNLSDNKRKKIMSRPFGVALLIGGVDKNGPCLWYTEPSGTNTRFLAASIGSAQEGAE LLLQENYNKDMTFEEAEILALTVLRQVMEDKLSSSNVEIAAVKKSDQTFYKYKTEDISRI IEALPSPIYPTIDMTA
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_081675.fa Sequence name : PVX_081675 Sequence length : 256 VALUES OF COMPUTED PARAMETERS Coef20 : 3.827 CoefTot : 0.359 ChDiff : -9 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.124 1.506 0.243 0.551 MesoH : -0.769 0.527 -0.329 0.218 MuHd_075 : 26.581 14.114 5.973 6.050 MuHd_095 : 22.151 12.185 5.897 4.710 MuHd_100 : 16.896 13.422 4.329 4.470 MuHd_105 : 11.946 13.520 3.115 4.358 Hmax_075 : 3.063 1.575 -1.476 2.135 Hmax_095 : 11.800 5.700 0.856 3.450 Hmax_100 : 3.000 3.000 -1.467 2.890 Hmax_105 : -5.775 2.400 -3.727 1.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8025 0.1975 DFMC : 0.8207 0.1793

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 256 PVX_081675 MFSTRSEYDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGICVNDGVILASERRIASALIEKDSVEKLLPIDDHIGCAMSG 80 LMADARTLIDYARVECNHYKFIYNENINIKSCVELISELALDFSNLSDNKRKKIMSRPFGVALLIGGVDKNGPCLWYTEP 160 SGTNTRFLAASIGSAQEGAELLLQENYNKDMTFEEAEILALTVLRQVMEDKLSSSNVEIAAVKKSDQTFYKYKTEDISRI 240 IEALPSPIYPTIDMTA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_081675 5 --MFSTR|SE 0.129 . PVX_081675 10 TRSEYDR|GV 0.202 . PVX_081675 20 TFSPEGR|LF 0.104 . PVX_081675 32 YALGAIK|LG 0.060 . PVX_081675 52 VILASER|RI 0.074 . PVX_081675 53 ILASERR|IA 0.179 . PVX_081675 61 ASALIEK|DS 0.065 . PVX_081675 66 EKDSVEK|LL 0.058 . PVX_081675 86 GLMADAR|TL 0.113 . PVX_081675 93 TLIDYAR|VE 0.082 . PVX_081675 100 VECNHYK|FI 0.078 . PVX_081675 110 NENINIK|SC 0.076 . PVX_081675 130 SNLSDNK|RK 0.052 . PVX_081675 131 NLSDNKR|KK 0.200 . PVX_081675 132 LSDNKRK|KI 0.100 . PVX_081675 133 SDNKRKK|IM 0.141 . PVX_081675 137 RKKIMSR|PF 0.130 . PVX_081675 150 LIGGVDK|NG 0.057 . PVX_081675 166 PSGTNTR|FL 0.113 . PVX_081675 189 LQENYNK|DM 0.068 . PVX_081675 205 LALTVLR|QV 0.101 . PVX_081675 211 RQVMEDK|LS 0.065 . PVX_081675 223 VEIAAVK|KS 0.059 . PVX_081675 224 EIAAVKK|SD 0.135 . PVX_081675 231 SDQTFYK|YK 0.075 . PVX_081675 233 QTFYKYK|TE 0.069 . PVX_081675 239 KTEDISR|II 0.089 . ____________________________^_________________

Fasta :-
>PVX_081675 GCGAAACACAAACGCACAAGCATAGTTATGCTATGCCTAAACAACGTTAAGCTGTAAGGA AGGCCATACGTAAAAGGAAAAAAAAAAAAAAAAAAAAACTTCAAGCGAAGATACGCATAT GTACGGATATATCACTATTCAGAAGCCCTTACTGTTCCTTCACTTTGTTATTTTTCCCAT TGGCTCGTTCGAGGAGGCATACCTTATATCTCCCCCGCTGACGCGCTTAAGAAATAAGTA CTTACAGGTGCTCGCTAGGAAAACGAGTCACCAAGCGTGAACTGAGAAGGCTGAAAAAGC TGAGCAAGCAGGCACTTTTTTATAGTAGTGGCTCACCCTTCGCACATACGGCTGGAGAGA ATCGCACCGTTGCCGCCGCATCCTTTTGACCTGATATATCCCCCCCTTTCGAATCGAAAA AATGTTCTCAACCAGGAGCGAGTACGACCGGGGAGTAAACACCTTTTCGCCGGAGGGCAG ACTTTTTCAAGTGGAGTACGCGCTGGGCGCTATAAAGCTGGGCAGCACGGCAGTCGGCAT CTGCGTGAACGATGGAGTCATCCTTGCCTCGGAGAGAAGAATCGCGTCCGCGTTAATAGA AAAAGATTCAGTGGAGAAGCTGCTGCCGATAGATGACCACATAGGGTGTGCCATGAGTGG ACTCATGGCGGACGCAAGGACGCTCATAGACTACGCAAGGGTTGAGTGTAATCATTACAA ATTTATATATAACGAAAATATAAACATAAAATCCTGTGTGGAATTAATATCCGAGCTAGC ATTAGATTTTTCCAATCTGTCAGACAATAAGAGGAAGAAAATTATGAGCAGACCATTTGG AGTTGCCTTACTGATAGGAGGAGTCGATAAGAATGGCCCTTGTCTTTGGTACACGGAGCC TTCTGGAACGAACACGAGATTTTTAGCTGCTTCCATTGGGTCTGCTCAGGAAGGGGCCGA ACTACTGCTGCAAGAAAATTACAACAAAGATATGACCTTTGAGGAAGCTGAGATTTTGGC GCTCACCGTTTTGAGGCAGGTGATGGAGGATAAGCTGTCTTCCTCCAACGTGGAAATTGC CGCCGTTAAGAAATCCGACCAGACGTTTTACAAGTACAAGACGGAGGACATCTCCAGGAT CATCGAGGCGCTGCCCTCGCCCATCTACCCGACGATCGACATGACGGCTTAG
Download Fasta

Fasta :-

MFSTRSEYDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGICVNDGVILASERRIASALIE KDSVEKLLPIDDHIGCAMSGLMADARTLIDYARVECNHYKFIYNENINIKSCVELISELA LDFSNLSDNKRKKIMSRPFGVALLIGGVDKNGPCLWYTEPSGTNTRFLAASIGSAQEGAE LLLQENYNKDMTFEEAEILALTVLRQVMEDKLSSSNVEIAAVKKSDQTFYKYKTEDISRI IEALPSPIYPTIDMTA

Proteasome subunits

title: active site
coordinates: S35,E51,R53,K66,S174

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_081675	T	255	0.632	0.041	PVX_081675	T	251	0.563	0.315	PVX_081675	T	4	0.532	0.030

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_081675	T	255	0.632	0.041	PVX_081675	T	251	0.563	0.315	PVX_081675	T	4	0.532	0.030

PVX_081675 | proteasome subunit alpha type-5, putative

ID's

UniProt_ID: A5K9Z5

GEO Functions

Computed_GO_Component_IDs: GO:0005839 GO:0019773

Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex

Computed_GO_Function_IDs: GO:0004175 GO:0004298

Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity

Computed_GO_Process_IDs: GO:0051603 GO:0006511

Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Proteasome subunits

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India