PVX_082355 | proteasome subunit beta type-7, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_082355OTHER0.9998170.0001110.000072
No Results

  • Fasta :-

    >PVX_082355 MKLEYMNALKEESGGFNFENLKRNEILKEKGVTFPNFRKTGTTICGLVCQNAVILGADTR ATEGPIVADKNCSKLHYISKNIYCAGAGVAGDLEHTTLWLQHNVELHRLNTNTQPRVAMC VSRLTQELFKYQGYKVCAIVLGGVDVTGPQLYGIHPHGSSCLLPFTALGSGSLSAMAVLE AKYRDNMTIEEGKELVCEAICAGIFNDLGSGGNVDICVITKDGSQHIRPYKQPNVRLYHL AQPTVFPKGTTPVLCQKIENIKKYITVEDA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_082355.fa Sequence name : PVX_082355 Sequence length : 270 VALUES OF COMPUTED PARAMETERS Coef20 : 3.010 CoefTot : 0.009 ChDiff : 2 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.794 1.412 0.311 0.570 MesoH : 0.052 0.557 -0.159 0.306 MuHd_075 : 17.214 9.538 6.690 3.258 MuHd_095 : 8.226 4.104 2.244 1.828 MuHd_100 : 9.199 6.090 2.657 2.269 MuHd_105 : 12.659 9.819 3.762 2.627 Hmax_075 : 4.300 7.500 -0.461 3.580 Hmax_095 : -0.350 2.000 -3.047 2.340 Hmax_100 : 3.600 5.100 -1.215 3.560 Hmax_105 : 5.250 8.867 -1.524 2.753 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9859 0.0141 DFMC : 0.9603 0.0397
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 270 PVX_082355 MKLEYMNALKEESGGFNFENLKRNEILKEKGVTFPNFRKTGTTICGLVCQNAVILGADTRATEGPIVADKNCSKLHYISK 80 NIYCAGAGVAGDLEHTTLWLQHNVELHRLNTNTQPRVAMCVSRLTQELFKYQGYKVCAIVLGGVDVTGPQLYGIHPHGSS 160 CLLPFTALGSGSLSAMAVLEAKYRDNMTIEEGKELVCEAICAGIFNDLGSGGNVDICVITKDGSQHIRPYKQPNVRLYHL 240 AQPTVFPKGTTPVLCQKIENIKKYITVEDA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_082355 2 -----MK|LE 0.057 . PVX_082355 10 EYMNALK|EE 0.064 . PVX_082355 22 FNFENLK|RN 0.055 . PVX_082355 23 NFENLKR|NE 0.146 . PVX_082355 28 KRNEILK|EK 0.084 . PVX_082355 30 NEILKEK|GV 0.067 . PVX_082355 38 VTFPNFR|KT 0.101 . PVX_082355 39 TFPNFRK|TG 0.073 . PVX_082355 60 ILGADTR|AT 0.099 . PVX_082355 70 GPIVADK|NC 0.065 . PVX_082355 74 ADKNCSK|LH 0.059 . PVX_082355 80 KLHYISK|NI 0.077 . PVX_082355 108 HNVELHR|LN 0.078 . PVX_082355 116 NTNTQPR|VA 0.109 . PVX_082355 123 VAMCVSR|LT 0.092 . PVX_082355 130 LTQELFK|YQ 0.074 . PVX_082355 135 FKYQGYK|VC 0.069 . PVX_082355 182 MAVLEAK|YR 0.065 . PVX_082355 184 VLEAKYR|DN 0.162 . PVX_082355 193 MTIEEGK|EL 0.057 . PVX_082355 221 DICVITK|DG 0.074 . PVX_082355 228 DGSQHIR|PY 0.101 . PVX_082355 231 QHIRPYK|QP 0.117 . PVX_082355 236 YKQPNVR|LY 0.103 . PVX_082355 248 QPTVFPK|GT 0.095 . PVX_082355 257 TPVLCQK|IE 0.060 . PVX_082355 262 QKIENIK|KY 0.068 . PVX_082355 263 KIENIKK|YI 0.108 . ____________________________^_________________

  • Fasta :-

    >PVX_082355 CATTTCGTTTAACACATATATGCTACTTTCCGTAGTAGGCGCTCCCTCCACTTGCATTTA CTTACGAAAGCATCCGCGAGTAGCACTGCTCACCGAATGCGCAATTTGCAGCAAGCATAC CATTTCGAACCAGCGTGCATATTTTGCGGCCGAGGGAAACTTTTTTAACATTTCTTTTGC TAGGAGGGATTAAACATCAGGATATGCGAACACATGTACAGCTGCACTTTGGTAAATCAC GAATTTATGGCATGTGAATAATTTGGAAGGGGAGAGCTGCAATTTAAGGGCACAACAAGA GTAACCCCTGGTATGTACTCCCCCCCCGAACAGCAAACGGATAACCATTCCTCTGCTTCA CCCCAATTCGGGCCCCCCCTCCTCCAAATAACGAAGTATACACGGCGAAGAATCACAGCT TAAAAAAAAAATCACCCCACAAACGACGTAGCACACGTTAACGTTACACCGAGCGCAAAG ATGAAGCTCGAGTATATGAATGCGCTGAAAGAAGAAAGTGGAGGATTCAATTTTGAAAAT CTCAAGAGAAATGAAATTTTGAAGGAAAAAGGAGTCACCTTTCCCAATTTTCGAAAAACG GGAACAACCATCTGTGGCTTGGTATGCCAAAATGCAGTTATTTTGGGAGCAGACACCAGA GCTACGGAAGGTCCAATAGTGGCAGATAAAAATTGTAGCAAGTTACACTATATAAGTAAA AATATATACTGTGCAGGTGCAGGGGTAGCTGGAGACTTGGAGCATACTACGTTATGGCTA CAACACAATGTAGAATTGCATCGTTTAAATACGAACACACAGCCCCGAGTAGCCATGTGT GTTTCAAGATTGACGCAAGAGCTGTTTAAGTACCAAGGATATAAAGTGTGTGCAATTGTC TTAGGAGGGGTAGATGTTACTGGCCCTCAGCTGTATGGTATTCACCCACATGGCTCTTCC TGTTTGTTACCCTTCACGGCTTTGGGGTCTGGATCCCTTAGTGCTATGGCTGTATTGGAG GCCAAATACAGGGATAATATGACGATAGAAGAAGGGAAAGAACTCGTGTGCGAAGCTATA TGTGCAGGTATTTTTAACGATTTGGGTTCAGGTGGAAATGTAGACATTTGCGTTATAACG AAGGATGGTTCGCAACACATAAGACCGTATAAGCAGCCGAACGTTCGACTATATCACCTG GCGCAACCGACCGTTTTTCCAAAGGGAACCACCCCTGTGTTGTGTCAAAAAATTGAAAAT ATAAAAAAATACATCACTGTGGAGGATGCATGA
  • Download Fasta

  • Fasta :-

    MKLEYMNALKEESGGFNFENLKRNEILKEKGVTFPNFRKTGTTICGLVCQNAVILGADTR ATEGPIVADKNCSKLHYISKNIYCAGAGVAGDLEHTTLWLQHNVELHRLNTNTQPRVAMC VSRLTQELFKYQGYKVCAIVLGGVDVTGPQLYGIHPHGSSCLLPFTALGSGSLSAMAVLE AKYRDNMTIEEGKELVCEAICAGIFNDLGSGGNVDICVITKDGSQHIRPYKQPNVRLYHL AQPTVFPKGTTPVLCQKIENIKKYITVEDA

  • title: active site
  • coordinates: T42,D58,R60,K74,S170,D207,S210,G211
No Results
No Results
No Results
PVX_082355      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India