PVX_082500 | signal peptidase 21 kDa subunit, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_082500OTHER0.9831460.0167960.000058
No Results

  • Fasta :-

    >PVX_082500 MEFIKEQYNAISLELKKNFRNPRDGISHVLNVVCLLLNALMIWKLLVVLTGCESPVVVVL SGSMEPGYFRGDTLALCHPPSIHAGDVVVYQINGRDIPIVHRILNIHISKDNKFHLLSKG DNNNIDDRGLYESNQYWLENEHVLGLSVGYAPYIGMLTIWVNEYPIMKWGIVSLMLFMIL LGYE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_082500.fa Sequence name : PVX_082500 Sequence length : 184 VALUES OF COMPUTED PARAMETERS Coef20 : 3.725 CoefTot : 0.000 ChDiff : -4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.924 2.471 0.328 0.759 MesoH : 0.273 0.982 -0.098 0.402 MuHd_075 : 9.485 7.180 3.236 2.136 MuHd_095 : 35.012 19.286 10.803 6.363 MuHd_100 : 30.294 16.990 8.986 5.846 MuHd_105 : 19.225 12.382 5.522 4.245 Hmax_075 : -4.100 5.367 -3.468 1.773 Hmax_095 : 8.500 10.000 0.673 4.330 Hmax_100 : 7.500 9.100 0.208 3.840 Hmax_105 : -4.725 2.700 -3.438 2.126 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9897 0.0103 DFMC : 0.9858 0.0142
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 184 PVX_082500 MEFIKEQYNAISLELKKNFRNPRDGISHVLNVVCLLLNALMIWKLLVVLTGCESPVVVVLSGSMEPGYFRGDTLALCHPP 80 SIHAGDVVVYQINGRDIPIVHRILNIHISKDNKFHLLSKGDNNNIDDRGLYESNQYWLENEHVLGLSVGYAPYIGMLTIW 160 VNEYPIMKWGIVSLMLFMILLGYE 240 ................................................................................ 80 ................................................................................ 160 ........................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_082500 5 --MEFIK|EQ 0.062 . PVX_082500 16 AISLELK|KN 0.067 . PVX_082500 17 ISLELKK|NF 0.080 . PVX_082500 20 ELKKNFR|NP 0.100 . PVX_082500 23 KNFRNPR|DG 0.283 . PVX_082500 44 NALMIWK|LL 0.055 . PVX_082500 70 MEPGYFR|GD 0.085 . PVX_082500 95 VYQINGR|DI 0.100 . PVX_082500 102 DIPIVHR|IL 0.077 . PVX_082500 110 LNIHISK|DN 0.069 . PVX_082500 113 HISKDNK|FH 0.063 . PVX_082500 119 KFHLLSK|GD 0.064 . PVX_082500 128 NNNIDDR|GL 0.103 . PVX_082500 168 NEYPIMK|WG 0.065 . ____________________________^_________________

  • Fasta :-

    >PVX_082500 ATGGAATTCATAAAGGAGCAGTACAACGCCATTTCGCTAGAACTTAAGAAGAACTTTAGA AACCCCCGAGATGGCATATCCCACGTGCTGAACGTAGTGTGCTTGCTGTTGAATGCCTTG ATGATTTGGAAGCTACTCGTCGTGCTTACAGGCTGCGAATCCCCAGTTGTGGTTGTCCTG AGTGGCAGCATGGAGCCAGGCTACTTCAGAGGAGACACCCTGGCGCTGTGCCACCCGCCG AGCATCCACGCAGGCGACGTGGTCGTGTACCAAATAAACGGAAGAGACATCCCCATTGTG CATAGGATATTAAACATTCACATATCGAAGGACAACAAATTTCATTTGTTATCAAAAGGG GACAATAACAACATTGACGACCGAGGGCTCTATGAGTCCAACCAGTATTGGCTAGAAAAC GAACACGTGCTTGGCCTCTCAGTTGGATATGCGCCATACATCGGAATGCTAACCATATGG GTTAATGAATACCCGATCATGAAGTGGGGAATTGTGTCACTCATGCTGTTTATGATTTTA CTTGGGTACGAGTGA
  • Download Fasta

  • Fasta :-

    MEFIKEQYNAISLELKKNFRNPRDGISHVLNVVCLLLNALMIWKLLVVLTGCESPVVVVL SGSMEPGYFRGDTLALCHPPSIHAGDVVVYQINGRDIPIVHRILNIHISKDNKFHLLSKG DNNNIDDRGLYESNQYWLENEHVLGLSVGYAPYIGMLTIWVNEYPIMKWGIVSLMLFMIL LGYE

  • title: Catalytic site
  • coordinates: S63,H101
No Results
No Results
No Results
PVX_082500      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India