PVX_082850 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
PVX_082850OTHER0.9999830.0000020.000015
No Results

  • Fasta :-

    >PVX_082850 MNDGLNKLTSVESEYLEKSGKKRRQKSLTPNDDVCVHQDGSSERNCLSTAQEGIKHNEGF PLPDVHASDRGAGQGERPSCVDAEVEEEDSETLEVIKQLSSIRIDSDSDSSVGGDKVVYN KKENTPKKRNKKKRGKNTITPLWDNSEVECVEDAIVYDESKDTEFPDLLQLFEEYNEKYF FSKLKSVQVKWSNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYRETLLHEMIHAFL FLTRSNSRHDGHGPEFKKHMYRINKATGLCITIYHSFHKEVNFYRNHVWRCTGVCRTYPP HFGYVKRSMNRPPGPKEKWWRRHSSYCRGNFVKVEDAEAAKNSDTAPLGEAGNNSGTLGK ALDSTRAKSKKTSAKKDGFEKRADGVEAELLNDAIVIMDSKEQTAEKQKEVNQLDIINLI KTLFGDNKQKVWSFPDLSVDYHKAFKNEKYFEID
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_082850.fa Sequence name : PVX_082850 Sequence length : 454 VALUES OF COMPUTED PARAMETERS Coef20 : 3.139 CoefTot : -0.134 ChDiff : 8 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.071 1.018 0.149 0.307 MesoH : -1.278 0.116 -0.560 0.062 MuHd_075 : 33.608 14.314 9.097 4.757 MuHd_095 : 39.487 24.768 11.284 7.810 MuHd_100 : 37.120 22.936 9.949 7.214 MuHd_105 : 23.298 15.698 5.785 4.925 Hmax_075 : 4.550 5.017 -1.182 2.497 Hmax_095 : 5.800 8.700 -0.360 3.940 Hmax_100 : 4.100 8.500 -0.565 3.940 Hmax_105 : -3.500 2.400 -3.030 1.990 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8826 0.1174 DFMC : 0.9500 0.0500
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 454 PVX_082850 MNDGLNKLTSVESEYLEKSGKKRRQKSLTPNDDVCVHQDGSSERNCLSTAQEGIKHNEGFPLPDVHASDRGAGQGERPSC 80 VDAEVEEEDSETLEVIKQLSSIRIDSDSDSSVGGDKVVYNKKENTPKKRNKKKRGKNTITPLWDNSEVECVEDAIVYDES 160 KDTEFPDLLQLFEEYNEKYFFSKLKSVQVKWSNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYRETLLHEMIHAFL 240 FLTRSNSRHDGHGPEFKKHMYRINKATGLCITIYHSFHKEVNFYRNHVWRCTGVCRTYPPHFGYVKRSMNRPPGPKEKWW 320 RRHSSYCRGNFVKVEDAEAAKNSDTAPLGEAGNNSGTLGKALDSTRAKSKKTSAKKDGFEKRADGVEAELLNDAIVIMDS 400 KEQTAEKQKEVNQLDIINLIKTLFGDNKQKVWSFPDLSVDYHKAFKNEKYFEID 480 ................................................................................ 80 .....................................................P.......................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_082850 7 MNDGLNK|LT 0.063 . PVX_082850 18 ESEYLEK|SG 0.067 . PVX_082850 21 YLEKSGK|KR 0.062 . PVX_082850 22 LEKSGKK|RR 0.081 . PVX_082850 23 EKSGKKR|RQ 0.183 . PVX_082850 24 KSGKKRR|QK 0.187 . PVX_082850 26 GKKRRQK|SL 0.305 . PVX_082850 44 QDGSSER|NC 0.073 . PVX_082850 55 TAQEGIK|HN 0.066 . PVX_082850 70 DVHASDR|GA 0.262 . PVX_082850 77 GAGQGER|PS 0.071 . PVX_082850 97 ETLEVIK|QL 0.066 . PVX_082850 103 KQLSSIR|ID 0.095 . PVX_082850 116 SSVGGDK|VV 0.068 . PVX_082850 121 DKVVYNK|KE 0.054 . PVX_082850 122 KVVYNKK|EN 0.092 . PVX_082850 127 KKENTPK|KR 0.067 . PVX_082850 128 KENTPKK|RN 0.120 . PVX_082850 129 ENTPKKR|NK 0.185 . PVX_082850 131 TPKKRNK|KK 0.081 . PVX_082850 132 PKKRNKK|KR 0.363 . PVX_082850 133 KKRNKKK|RG 0.119 . PVX_082850 134 KRNKKKR|GK 0.578 *ProP* PVX_082850 136 NKKKRGK|NT 0.070 . PVX_082850 161 IVYDESK|DT 0.063 . PVX_082850 178 FEEYNEK|YF 0.067 . PVX_082850 183 EKYFFSK|LK 0.080 . PVX_082850 185 YFFSKLK|SV 0.102 . PVX_082850 190 LKSVQVK|WS 0.085 . PVX_082850 194 QVKWSNK|MK 0.060 . PVX_082850 196 KWSNKMK|LC 0.075 . PVX_082850 205 AGICIFK|KS 0.058 . PVX_082850 206 GICIFKK|SG 0.129 . PVX_082850 213 SGYCCIR|LS 0.078 . PVX_082850 220 LSLPLLK|LR 0.058 . PVX_082850 222 LPLLKLR|KI 0.096 . PVX_082850 223 PLLKLRK|IK 0.074 . PVX_082850 225 LKLRKIK|EY 0.152 . PVX_082850 228 RKIKEYR|ET 0.100 . PVX_082850 244 AFLFLTR|SN 0.132 . PVX_082850 248 LTRSNSR|HD 0.106 . PVX_082850 257 GHGPEFK|KH 0.061 . PVX_082850 258 HGPEFKK|HM 0.095 . PVX_082850 262 FKKHMYR|IN 0.100 . PVX_082850 265 HMYRINK|AT 0.161 . PVX_082850 279 IYHSFHK|EV 0.088 . PVX_082850 285 KEVNFYR|NH 0.076 . PVX_082850 290 YRNHVWR|CT 0.222 . PVX_082850 296 RCTGVCR|TY 0.086 . PVX_082850 306 PHFGYVK|RS 0.056 . PVX_082850 307 HFGYVKR|SM 0.265 . PVX_082850 311 VKRSMNR|PP 0.123 . PVX_082850 316 NRPPGPK|EK 0.063 . PVX_082850 318 PPGPKEK|WW 0.072 . PVX_082850 321 PKEKWWR|RH 0.095 . PVX_082850 322 KEKWWRR|HS 0.195 . PVX_082850 328 RHSSYCR|GN 0.115 . PVX_082850 333 CRGNFVK|VE 0.068 . PVX_082850 341 EDAEAAK|NS 0.074 . PVX_082850 360 NSGTLGK|AL 0.070 . PVX_082850 366 KALDSTR|AK 0.102 . PVX_082850 368 LDSTRAK|SK 0.107 . PVX_082850 370 STRAKSK|KT 0.098 . PVX_082850 371 TRAKSKK|TS 0.195 . PVX_082850 375 SKKTSAK|KD 0.086 . PVX_082850 376 KKTSAKK|DG 0.118 . PVX_082850 381 KKDGFEK|RA 0.082 . PVX_082850 382 KDGFEKR|AD 0.261 . PVX_082850 401 IVIMDSK|EQ 0.057 . PVX_082850 407 KEQTAEK|QK 0.069 . PVX_082850 409 QTAEKQK|EV 0.077 . PVX_082850 421 DIINLIK|TL 0.062 . PVX_082850 428 TLFGDNK|QK 0.068 . PVX_082850 430 FGDNKQK|VW 0.060 . PVX_082850 443 LSVDYHK|AF 0.062 . PVX_082850 446 DYHKAFK|NE 0.057 . PVX_082850 449 KAFKNEK|YF 0.070 . ____________________________^_________________

  • Fasta :-

    >PVX_082850 GGAGAAAGAAAAGAAAAGCAAAGGAGAAAGGAGAAAGGAATCGTGGCCAAGTGAGAGGAT GTAGAGGACTATCATCAACTGCTGCTGCAGTGAGGCTCTAGCAAAATGCGCAAAGAGATT GGGGAACACAAACCGATTCGTGTCTCGGCATAGTTAAGTAGTTCCACCCCCAAAAAAGGA AGAAGCGCGCACTGGACATTACCCTGGCGGAGGTTCTCTCCACAGAGGGATGCAAAAAGG GAAATAAAAAAAAAAAAGGAAATAACTTGTACTCCTTATTACTGACGATTAAGGGGGGGA GAGAAAAAAAAATAAACAAATAAAACAGCGGCACTGCGAATAGCGGCTCTCCAAGTAGCT GCCCCCCAAGTAGCTGCCCCCCAAAATGAACGACGGACTGAACAAGCTAACTTCCGTCGA GAGCGAGTACCTAGAGAAGAGCGGGAAAAAGAGAAGACAGAAATCTTTAACTCCAAACGA TGATGTCTGCGTCCACCAGGATGGGAGCTCTGAACGAAATTGCTTGTCCACAGCCCAAGA GGGAATAAAACACAACGAGGGATTTCCCCTCCCCGATGTGCATGCAAGTGATAGGGGAGC GGGCCAAGGAGAACGTCCCTCCTGCGTAGACGCAGAAGTGGAGGAAGAAGATTCTGAAAC GTTGGAAGTGATAAAGCAGCTGAGCTCCATTCGTATCGACTCAGACTCGGACAGCTCCGT CGGGGGGGATAAGGTGGTTTATAATAAAAAGGAAAACACGCCAAAAAAGAGGAACAAAAA AAAAAGGGGGAAAAACACCATCACGCCGTTGTGGGATAATTCGGAGGTGGAATGCGTGGA GGATGCCATCGTGTACGACGAGTCGAAGGACACCGAATTTCCAGACCTTCTGCAACTCTT CGAGGAATACAACGAGAAGTATTTTTTTAGCAAATTGAAGTCCGTGCAGGTGAAGTGGAG CAACAAAATGAAGCTATGCGCGGGGATATGCATATTTAAGAAATCAGGCTACTGCTGCAT TCGGCTATCCCTCCCGCTTTTGAAGCTGCGGAAGATAAAGGAGTACCGGGAGACCCTACT GCACGAAATGATTCACGCGTTCCTCTTTCTAACGAGAAGCAACTCTCGACACGATGGGCA CGGACCGGAATTCAAAAAGCACATGTACCGAATCAACAAAGCGACGGGGCTGTGCATCAC CATATACCACAGCTTTCACAAGGAGGTGAACTTTTACAGGAACCACGTCTGGCGGTGCAC GGGCGTCTGCAGAACTTACCCTCCCCACTTTGGGTACGTCAAAAGGTCTATGAATAGGCC CCCCGGGCCCAAGGAAAAGTGGTGGAGAAGGCACTCCTCGTACTGCCGCGGCAATTTCGT CAAAGTGGAAGACGCTGAAGCGGCCAAGAATTCGGACACGGCACCGTTGGGCGAGGCCGG GAACAACTCAGGCACACTCGGGAAGGCGCTGGACTCGACGCGCGCGAAGAGTAAGAAGAC GAGCGCGAAAAAAGACGGCTTCGAAAAACGGGCAGACGGCGTAGAGGCAGAACTGCTGAA CGACGCCATAGTCATTATGGACTCGAAGGAACAAACTGCGGAGAAGCAAAAAGAGGTAAA CCAACTGGACATCATTAATTTAATAAAAACCCTGTTTGGTGACAACAAGCAGAAGGTGTG GTCCTTCCCTGACCTGTCCGTTGACTACCACAAGGCGTTTAAAAATGAAAAGTACTTTGA AATAGACTAG
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  • Fasta :-

    MNDGLNKLTSVESEYLEKSGKKRRQKSLTPNDDVCVHQDGSSERNCLSTAQEGIKHNEGF PLPDVHASDRGAGQGERPSCVDAEVEEEDSETLEVIKQLSSIRIDSDSDSSVGGDKVVYN KKENTPKKRNKKKRGKNTITPLWDNSEVECVEDAIVYDESKDTEFPDLLQLFEEYNEKYF FSKLKSVQVKWSNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYRETLLHEMIHAFL FLTRSNSRHDGHGPEFKKHMYRINKATGLCITIYHSFHKEVNFYRNHVWRCTGVCRTYPP HFGYVKRSMNRPPGPKEKWWRRHSSYCRGNFVKVEDAEAAKNSDTAPLGEAGNNSGTLGK ALDSTRAKSKKTSAKKDGFEKRADGVEAELLNDAIVIMDSKEQTAEKQKEVNQLDIINLI KTLFGDNKQKVWSFPDLSVDYHKAFKNEKYFEID

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_082850106 SIRIDSDSDS0.997unspPVX_082850106 SIRIDSDSDS0.997unspPVX_082850106 SIRIDSDSDS0.997unspPVX_082850111 SDSDSSVGGD0.992unspPVX_082850247 STRSNSRHDG0.997unspPVX_082850369 STRAKSKKTS0.997unspPVX_082850373 SSKKTSAKKD0.995unspPVX_08285027 SRRQKSLTPN0.995unspPVX_08285079 SGERPSCVDA0.995unsp
PVX_082850      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India