PVX_083380 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_083380OTHER0.9999680.0000140.000019
No Results

  • Fasta :-

    >PVX_083380 MHFDFTLQTCCERNQNITLVSISACVLINAMFWKCKILEPFKLLTVFLHEFSHASACWLT GGRVKSIEVNRNHGGCTNTIGGNKFLILPAGYIGSCFYGMFFILMAYINKWTLITSAAFL CFLLLIVLIFYANNFFLRLLCVLFLTLTISVWVLCVHFKEDVQYWPLKIIMTFIGVLNEI YSMVDIIEDLITRSVPESDAYKYAELTKCNSKFCGALWFVVNLTFICLTVYLIGAIHVKS FDD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_083380.fa Sequence name : PVX_083380 Sequence length : 243 VALUES OF COMPUTED PARAMETERS Coef20 : 4.055 CoefTot : -0.239 ChDiff : 1 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.588 2.982 0.610 0.924 MesoH : 1.542 1.802 0.230 0.660 MuHd_075 : 21.459 9.838 6.174 3.448 MuHd_095 : 21.147 11.825 7.360 2.965 MuHd_100 : 16.958 14.943 7.903 3.248 MuHd_105 : 11.708 16.425 7.431 3.178 Hmax_075 : 9.567 6.417 2.658 2.070 Hmax_095 : 5.425 4.812 0.777 2.371 Hmax_100 : 10.000 11.900 3.562 3.450 Hmax_105 : 0.583 9.800 1.342 2.695 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9757 0.0243 DFMC : 0.9539 0.0461
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 243 PVX_083380 MHFDFTLQTCCERNQNITLVSISACVLINAMFWKCKILEPFKLLTVFLHEFSHASACWLTGGRVKSIEVNRNHGGCTNTI 80 GGNKFLILPAGYIGSCFYGMFFILMAYINKWTLITSAAFLCFLLLIVLIFYANNFFLRLLCVLFLTLTISVWVLCVHFKE 160 DVQYWPLKIIMTFIGVLNEIYSMVDIIEDLITRSVPESDAYKYAELTKCNSKFCGALWFVVNLTFICLTVYLIGAIHVKS 240 FDD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_083380 13 LQTCCER|NQ 0.076 . PVX_083380 34 INAMFWK|CK 0.073 . PVX_083380 36 AMFWKCK|IL 0.071 . PVX_083380 42 KILEPFK|LL 0.061 . PVX_083380 63 CWLTGGR|VK 0.068 . PVX_083380 65 LTGGRVK|SI 0.100 . PVX_083380 71 KSIEVNR|NH 0.116 . PVX_083380 84 NTIGGNK|FL 0.056 . PVX_083380 110 LMAYINK|WT 0.059 . PVX_083380 138 ANNFFLR|LL 0.106 . PVX_083380 159 VLCVHFK|ED 0.064 . PVX_083380 168 VQYWPLK|II 0.072 . PVX_083380 193 IEDLITR|SV 0.121 . PVX_083380 202 PESDAYK|YA 0.075 . PVX_083380 208 KYAELTK|CN 0.066 . PVX_083380 212 LTKCNSK|FC 0.072 . PVX_083380 239 IGAIHVK|SF 0.106 . ____________________________^_________________

  • Fasta :-

    >PVX_083380 GCTTTCTGCTGACTGTGACTGCTTTGCCAAGGGGGCTTGGCGAGCAGCGCGAGGGAACGC ATCCCATAAGACGGCACCCCAGACGAAGGCATCCCGACCAAAGCCACCCAACTGAAGCTC ATCCAACGAAGCTATTCCAACGAAGCTATTCCAACGAAGCTATCCCAGCGAAGCTATCCC AGCGAAGCTATCCAAACGAAGTTATCCCAACGGACGGCACAATGCATTTCGACTTCACCC TGCAGACCTGCTGCGAGCGAAACCAAAACATCACCCTCGTGAGCATCTCCGCGTGCGTGC TGATAAACGCCATGTTTTGGAAGTGCAAAATTTTGGAGCCCTTCAAACTGCTGACCGTTT TTTTGCACGAGTTTTCGCATGCGTCGGCCTGTTGGTTGACGGGGGGCCGGGTGAAGAGCA TAGAGGTGAACAGAAATCATGGAGGATGCACAAACACAATTGGAGGAAACAAATTCCTAA TTCTGCCCGCTGGCTACATTGGCTCCTGTTTCTACGGGATGTTTTTTATTTTGATGGCAT ACATAAACAAATGGACGCTGATCACATCCGCCGCCTTCTTATGCTTCTTACTCTTAATAG TGTTAATTTTTTATGCGAATAATTTTTTCCTAAGGCTTCTCTGCGTCCTCTTCTTAACGC TTACCATTTCTGTTTGGGTTTTGTGTGTGCATTTTAAGGAAGACGTGCAGTACTGGCCCC TAAAAATAATCATGACGTTTATAGGCGTCCTGAACGAAATTTACAGCATGGTAGACATAA TTGAAGACTTAATTACGAGATCTGTACCTGAGTCCGATGCGTATAAATATGCAGAGCTGA CCAAATGTAACTCCAAGTTTTGTGGGGCCCTATGGTTTGTGGTCAATTTGACTTTTATAT GTTTGACCGTTTATTTGATCGGCGCAATTCATGTGAAGAGCTTTGACGATTGA
  • Download Fasta

  • Fasta :-

    MHFDFTLQTCCERNQNITLVSISACVLINAMFWKCKILEPFKLLTVFLHEFSHASACWLT GGRVKSIEVNRNHGGCTNTIGGNKFLILPAGYIGSCFYGMFFILMAYINKWTLITSAAFL CFLLLIVLIFYANNFFLRLLCVLFLTLTISVWVLCVHFKEDVQYWPLKIIMTFIGVLNEI YSMVDIIEDLITRSVPESDAYKYAELTKCNSKFCGALWFVVNLTFICLTVYLIGAIHVKS FDD

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethod
PVX_08338066 SGRVKSIEVN0.993unsp
PVX_083380      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India