PVX_085265 | enoyl-CoA hydratase, putative

  • Computed_GO_Component_IDs:  GO:0005739      

  • Computed_GO_Components:  mitochondrion      

  • Computed_GO_Function_IDs:  GO:0003824      

  • Computed_GO_Functions:  catalytic activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_085265mTP0.0146010.0000290.985369CS pos: 35-36. RRH-KS. Pr: 0.2784
No Results

  • Fasta :-

    >PVX_085265 MLARRSPFARLLSSRTGHAFRRGGFAKLGPPPRRHKSSTTQVEDAPVEESSQQASHHDSH VGLHDSHPFGHRFAHHKYVDFFRDESMSVGIVSFRSAVHGKKNILGDFLEELKNVVEHIT NVMANEETNTFYIKEFPRGDNYLVQNMRNRIPYVDNRLKVLILTGGNEPIGSGEASMSGS TPDYNSFLKNDEQLNVQLANSFRYLCNTIQHLPLITISSINGQCHNSGMDLLLSTDFKLS SEESTFGFNKAHLGLLPYGGGTQKLFRAIPMSYAKHLLLTGDTIRAKDALRINLIDICMG HNEDHFVQNSCVHFDANLAKKEKMQIIKESVGTFFADVFSNELFKDRVKDSCFVFSLFFA FQFLFIPTNALQNVKMSILEGMSLAEPNLYLDHDRAVFERNINAPQRAEILAYLKRRVSG APSVPT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_085265.fa Sequence name : PVX_085265 Sequence length : 426 VALUES OF COMPUTED PARAMETERS Coef20 : 4.949 CoefTot : -0.179 ChDiff : 2 ZoneTo : 42 KR : 10 DE : 0 CleavSite : 36 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 1.976 0.325 0.768 MesoH : -0.311 0.448 -0.369 0.241 MuHd_075 : 45.353 20.999 9.629 11.065 MuHd_095 : 41.808 23.431 10.114 9.831 MuHd_100 : 34.585 18.804 8.775 7.629 MuHd_105 : 30.457 16.144 7.738 7.254 Hmax_075 : 12.900 10.500 1.762 4.570 Hmax_095 : 14.525 11.900 1.967 4.944 Hmax_100 : 15.600 11.900 2.088 5.170 Hmax_105 : 12.100 3.600 1.263 3.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0014 0.9986 DFMC : 0.0024 0.9976 This protein is probably imported in mitochondria. f(Ser) = 0.1190 f(Arg) = 0.1905 CMi = 0.35361 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 426 PVX_085265 MLARRSPFARLLSSRTGHAFRRGGFAKLGPPPRRHKSSTTQVEDAPVEESSQQASHHDSHVGLHDSHPFGHRFAHHKYVD 80 FFRDESMSVGIVSFRSAVHGKKNILGDFLEELKNVVEHITNVMANEETNTFYIKEFPRGDNYLVQNMRNRIPYVDNRLKV 160 LILTGGNEPIGSGEASMSGSTPDYNSFLKNDEQLNVQLANSFRYLCNTIQHLPLITISSINGQCHNSGMDLLLSTDFKLS 240 SEESTFGFNKAHLGLLPYGGGTQKLFRAIPMSYAKHLLLTGDTIRAKDALRINLIDICMGHNEDHFVQNSCVHFDANLAK 320 KEKMQIIKESVGTFFADVFSNELFKDRVKDSCFVFSLFFAFQFLFIPTNALQNVKMSILEGMSLAEPNLYLDHDRAVFER 400 NINAPQRAEILAYLKRRVSGAPSVPT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_085265 4 ---MLAR|RS 0.075 . PVX_085265 5 --MLARR|SP 0.180 . PVX_085265 10 RRSPFAR|LL 0.172 . PVX_085265 15 ARLLSSR|TG 0.096 . PVX_085265 21 RTGHAFR|RG 0.094 . PVX_085265 22 TGHAFRR|GG 0.222 . PVX_085265 27 RRGGFAK|LG 0.074 . PVX_085265 33 KLGPPPR|RH 0.088 . PVX_085265 34 LGPPPRR|HK 0.138 . PVX_085265 36 PPPRRHK|SS 0.292 . PVX_085265 72 SHPFGHR|FA 0.129 . PVX_085265 77 HRFAHHK|YV 0.119 . PVX_085265 83 KYVDFFR|DE 0.125 . PVX_085265 95 VGIVSFR|SA 0.183 . PVX_085265 101 RSAVHGK|KN 0.076 . PVX_085265 102 SAVHGKK|NI 0.087 . PVX_085265 113 DFLEELK|NV 0.058 . PVX_085265 134 TNTFYIK|EF 0.065 . PVX_085265 138 YIKEFPR|GD 0.090 . PVX_085265 148 YLVQNMR|NR 0.080 . PVX_085265 150 VQNMRNR|IP 0.081 . PVX_085265 157 IPYVDNR|LK 0.086 . PVX_085265 159 YVDNRLK|VL 0.056 . PVX_085265 189 DYNSFLK|ND 0.067 . PVX_085265 203 QLANSFR|YL 0.122 . PVX_085265 238 LLSTDFK|LS 0.072 . PVX_085265 250 STFGFNK|AH 0.063 . PVX_085265 264 YGGGTQK|LF 0.064 . PVX_085265 267 GTQKLFR|AI 0.098 . PVX_085265 275 IPMSYAK|HL 0.068 . PVX_085265 285 LTGDTIR|AK 0.094 . PVX_085265 287 GDTIRAK|DA 0.073 . PVX_085265 291 RAKDALR|IN 0.077 . PVX_085265 320 FDANLAK|KE 0.065 . PVX_085265 321 DANLAKK|EK 0.136 . PVX_085265 323 NLAKKEK|MQ 0.077 . PVX_085265 328 EKMQIIK|ES 0.060 . PVX_085265 345 FSNELFK|DR 0.063 . PVX_085265 347 NELFKDR|VK 0.081 . PVX_085265 349 LFKDRVK|DS 0.067 . PVX_085265 375 NALQNVK|MS 0.059 . PVX_085265 395 LYLDHDR|AV 0.103 . PVX_085265 400 DRAVFER|NI 0.143 . PVX_085265 407 NINAPQR|AE 0.080 . PVX_085265 415 EILAYLK|RR 0.051 . PVX_085265 416 ILAYLKR|RV 0.311 . PVX_085265 417 LAYLKRR|VS 0.141 . ____________________________^_________________

  • Fasta :-

    >PVX_085265 ATGCTCGCGCGGAGGAGCCCCTTCGCGAGGCTGCTGAGCAGCAGGACGGGGCATGCCTTC CGTAGAGGAGGCTTCGCCAAGCTGGGCCCTCCGCCCAGGCGGCACAAAAGTAGCACTACC CAAGTGGAAGACGCGCCAGTGGAGGAGAGCAGCCAGCAAGCTAGTCACCACGATAGCCAC GTGGGCCTGCACGATAGCCACCCCTTCGGCCACCGCTTCGCCCACCACAAGTACGTGGAC TTCTTCCGAGATGAATCGATGAGCGTCGGCATTGTAAGTTTTAGAAGCGCCGTGCACGGG AAAAAAAACATTTTGGGGGACTTCCTGGAAGAGCTCAAGAATGTGGTGGAGCACATCACC AACGTCATGGCGAATGAGGAGACGAACACATTTTACATAAAGGAGTTCCCCCGGGGGGAC AACTACTTGGTGCAGAACATGCGCAATAGAATTCCCTACGTAGACAATCGCTTAAAGGTG CTCATCCTTACGGGGGGAAATGAACCGATTGGGAGTGGCGAAGCCTCCATGAGTGGGAGC ACCCCCGATTATAACTCTTTCCTGAAGAACGACGAGCAGCTGAACGTGCAGCTGGCCAAC TCATTCCGCTACCTATGCAACACCATTCAACATTTGCCCCTCATCACCATCAGCAGCATC AACGGTCAGTGCCACAATAGCGGCATGGACCTCCTGCTGTCAACGGATTTCAAACTGTCT AGCGAAGAGAGCACCTTCGGTTTTAACAAAGCACATTTAGGGTTATTACCCTACGGAGGG GGTACGCAGAAGTTGTTCCGAGCCATTCCCATGAGCTACGCGAAGCATTTGCTACTTACA GGAGACACCATCAGAGCGAAGGACGCCCTACGGATTAACCTCATAGATATATGCATGGGG CATAATGAAGACCATTTTGTGCAAAACTCTTGCGTCCATTTTGATGCCAATTTGGCGAAA AAGGAGAAGATGCAAATTATAAAAGAAAGCGTTGGAACATTCTTTGCAGACGTTTTCTCA AACGAGTTATTTAAGGATAGGGTGAAGGACAGCTGCTTTGTCTTTTCCCTCTTTTTTGCC TTCCAGTTTTTATTTATTCCTACCAACGCTTTGCAGAATGTTAAAATGAGCATCCTGGAG GGCATGTCGCTCGCAGAGCCCAACTTGTATTTGGACCACGACAGGGCTGTGTTCGAGCGA AACATTAACGCACCCCAGAGGGCCGAAATCCTCGCCTATTTGAAGCGCAGGGTGAGCGGC GCGCCCTCAGTGCCTACTTAG
  • Download Fasta

  • Fasta :-

    MLARRSPFARLLSSRTGHAFRRGGFAKLGPPPRRHKSSTTQVEDAPVEESSQQASHHDSH VGLHDSHPFGHRFAHHKYVDFFRDESMSVGIVSFRSAVHGKKNILGDFLEELKNVVEHIT NVMANEETNTFYIKEFPRGDNYLVQNMRNRIPYVDNRLKVLILTGGNEPIGSGEASMSGS TPDYNSFLKNDEQLNVQLANSFRYLCNTIQHLPLITISSINGQCHNSGMDLLLSTDFKLS SEESTFGFNKAHLGLLPYGGGTQKLFRAIPMSYAKHLLLTGDTIRAKDALRINLIDICMG HNEDHFVQNSCVHFDANLAKKEKMQIIKESVGTFFADVFSNELFKDRVKDSCFVFSLFFA FQFLFIPTNALQNVKMSILEGMSLAEPNLYLDHDRAVFERNINAPQRAEILAYLKRRVSG APSVPT

  • title: substrate binding site
  • coordinates: E174,S178,G179,S180,D183,Y184,Q223,H225,N226,S227,N249,K250,L253
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_085265T4260.6000.407PVX_085265T400.5790.131PVX_085265T390.5630.061
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_085265T4260.6000.407PVX_085265T400.5790.131PVX_085265T390.5630.061
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_085265419 SKRRVSGAPS0.994unspPVX_085265419 SKRRVSGAPS0.994unspPVX_085265419 SKRRVSGAPS0.994unspPVX_08526555 SSQQASHHDS0.995unspPVX_085265240 SDFKLSSEES0.997unsp
PVX_085265      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India