PVX_085705 | ATP-dependent protease, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_085705OTHER0.9623080.0001890.037503
No Results

  • Fasta :-

    >PVX_085705 MRPLTSLLKCRREICRTGRQHYRCVKLRGKNDTQLVSAIVGGKEVECFSLLNKPLFPGLS YVLNADGNLVRLFEKCKRKSAHIGLFLLKSVGNEKEGGLFNEAHFKMDVPIGGKPFLKKD IAFIKDVGEVHHCGSVGVIREVLYKGGHPRGETEGRSIPIGKTPHRSSSMDTTEGVTCKD NSNDERERNQRRGPLLDHSQHMHQVVIEIAEKVKIVKWVKGNTAQVDAIKRQMYSQQKDP QIRAYQMEIVDKIKEIIYLNSACSVEYNLLLKYYDVKNVYSLVNLVGSITMGKSSSLQSL LEKEDVEDQLAICLELLNEDIILLKMKKELSTNLKNKFDEEKEKLMIRECISNLKKKIGE KTDHEILSDKFFAKFQSKRSHMGEEASAAILRELNKFSLYSEHCSDYASTYQYLNTVLSI PFGKYAPLCEDISACERTLTKSHYGLHQVKRYILEYVGLYILNKNVKPKILTLVGYPGIG KTSICKSISSALQLPHCIINMNNITSMNELIGHRRTYVNSYEGRIVQALISTDVMNPLIV LDELDKISFTNGNVYSALLNLFDSSQNKGYKDVYVNFPINIGRAFFICTANSVEHIPETL LDRMEVVHVYPYTNEEKVFIFKNYLKKKIQEETKVTDEYLHISEGLLLYVIQNYTNENGL RQFYSIVYSVYKRRAFMLLKGLTGKVHLGVHNLHLFHDYVSFERLQQRGSIAVTPCGHEG MIKSIAFTEDGGQVVTIEVVGLAWGNSHSEGSSNLHCAEVLPKCTTQGEELLLMHPSWSR SQFAMADETMHPQALLRSSQLGKTVTEDACRGGIAAVATSSDMVEPPLIEGGNPPFAMRK AAEGTHRTQPLQRSRSWEPHPNGQIVITGNVGKIMQESILIANTFATQLLKRVAPNFQGQ HLHINLSECDVKKDGPSAGVNFVTSILSYHLRTAVSSSVCMTGEITLNGHVLKIGGLVEK MILARNFGIRTLIIPRDNAREYELLPSAVKGNIRVLYVHHYCQIFNFLFPKFGPLPP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_085705.fa Sequence name : PVX_085705 Sequence length : 1017 VALUES OF COMPUTED PARAMETERS Coef20 : 4.803 CoefTot : -0.465 ChDiff : 18 ZoneTo : 31 KR : 10 DE : 1 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.912 1.624 0.064 0.554 MesoH : -0.322 0.479 -0.299 0.234 MuHd_075 : 35.549 18.023 11.151 8.863 MuHd_095 : 48.303 21.904 11.987 11.759 MuHd_100 : 59.544 27.948 14.810 13.096 MuHd_105 : 58.529 30.766 15.595 12.975 Hmax_075 : 14.350 4.667 2.130 2.788 Hmax_095 : -1.750 3.150 1.848 2.047 Hmax_100 : 8.900 9.400 3.192 3.110 Hmax_105 : 1.400 14.350 0.580 4.620 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0496 0.9504 DFMC : 0.0834 0.9166 This protein is probably imported in mitochondria. f(Ser) = 0.0323 f(Arg) = 0.2258 CMi = 0.08354 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1017 PVX_085705 MRPLTSLLKCRREICRTGRQHYRCVKLRGKNDTQLVSAIVGGKEVECFSLLNKPLFPGLSYVLNADGNLVRLFEKCKRKS 80 AHIGLFLLKSVGNEKEGGLFNEAHFKMDVPIGGKPFLKKDIAFIKDVGEVHHCGSVGVIREVLYKGGHPRGETEGRSIPI 160 GKTPHRSSSMDTTEGVTCKDNSNDERERNQRRGPLLDHSQHMHQVVIEIAEKVKIVKWVKGNTAQVDAIKRQMYSQQKDP 240 QIRAYQMEIVDKIKEIIYLNSACSVEYNLLLKYYDVKNVYSLVNLVGSITMGKSSSLQSLLEKEDVEDQLAICLELLNED 320 IILLKMKKELSTNLKNKFDEEKEKLMIRECISNLKKKIGEKTDHEILSDKFFAKFQSKRSHMGEEASAAILRELNKFSLY 400 SEHCSDYASTYQYLNTVLSIPFGKYAPLCEDISACERTLTKSHYGLHQVKRYILEYVGLYILNKNVKPKILTLVGYPGIG 480 KTSICKSISSALQLPHCIINMNNITSMNELIGHRRTYVNSYEGRIVQALISTDVMNPLIVLDELDKISFTNGNVYSALLN 560 LFDSSQNKGYKDVYVNFPINIGRAFFICTANSVEHIPETLLDRMEVVHVYPYTNEEKVFIFKNYLKKKIQEETKVTDEYL 640 HISEGLLLYVIQNYTNENGLRQFYSIVYSVYKRRAFMLLKGLTGKVHLGVHNLHLFHDYVSFERLQQRGSIAVTPCGHEG 720 MIKSIAFTEDGGQVVTIEVVGLAWGNSHSEGSSNLHCAEVLPKCTTQGEELLLMHPSWSRSQFAMADETMHPQALLRSSQ 800 LGKTVTEDACRGGIAAVATSSDMVEPPLIEGGNPPFAMRKAAEGTHRTQPLQRSRSWEPHPNGQIVITGNVGKIMQESIL 880 IANTFATQLLKRVAPNFQGQHLHINLSECDVKKDGPSAGVNFVTSILSYHLRTAVSSSVCMTGEITLNGHVLKIGGLVEK 960 MILARNFGIRTLIIPRDNAREYELLPSAVKGNIRVLYVHHYCQIFNFLFPKFGPLPP 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ......................................................... 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_085705 2 -----MR|PL 0.094 . PVX_085705 9 PLTSLLK|CR 0.055 . PVX_085705 11 TSLLKCR|RE 0.077 . PVX_085705 12 SLLKCRR|EI 0.150 . PVX_085705 16 CRREICR|TG 0.100 . PVX_085705 19 EICRTGR|QH 0.176 . PVX_085705 23 TGRQHYR|CV 0.127 . PVX_085705 26 QHYRCVK|LR 0.121 . PVX_085705 28 YRCVKLR|GK 0.135 . PVX_085705 30 CVKLRGK|ND 0.058 . PVX_085705 43 SAIVGGK|EV 0.067 . PVX_085705 53 CFSLLNK|PL 0.077 . PVX_085705 71 ADGNLVR|LF 0.085 . PVX_085705 75 LVRLFEK|CK 0.066 . PVX_085705 77 RLFEKCK|RK 0.072 . PVX_085705 78 LFEKCKR|KS 0.142 . PVX_085705 79 FEKCKRK|SA 0.256 . PVX_085705 89 IGLFLLK|SV 0.106 . PVX_085705 95 KSVGNEK|EG 0.060 . PVX_085705 106 FNEAHFK|MD 0.067 . PVX_085705 114 DVPIGGK|PF 0.052 . PVX_085705 118 GGKPFLK|KD 0.065 . PVX_085705 119 GKPFLKK|DI 0.172 . PVX_085705 125 KDIAFIK|DV 0.149 . PVX_085705 140 GSVGVIR|EV 0.137 . PVX_085705 145 IREVLYK|GG 0.078 . PVX_085705 150 YKGGHPR|GE 0.135 . PVX_085705 156 RGETEGR|SI 0.149 . PVX_085705 162 RSIPIGK|TP 0.064 . PVX_085705 166 IGKTPHR|SS 0.132 . PVX_085705 179 TEGVTCK|DN 0.090 . PVX_085705 186 DNSNDER|ER 0.092 . PVX_085705 188 SNDERER|NQ 0.079 . PVX_085705 191 ERERNQR|RG 0.147 . PVX_085705 192 RERNQRR|GP 0.112 . PVX_085705 212 VIEIAEK|VK 0.053 . PVX_085705 214 EIAEKVK|IV 0.080 . PVX_085705 217 EKVKIVK|WV 0.080 . PVX_085705 220 KIVKWVK|GN 0.073 . PVX_085705 230 AQVDAIK|RQ 0.056 . PVX_085705 231 QVDAIKR|QM 0.143 . PVX_085705 238 QMYSQQK|DP 0.065 . PVX_085705 243 QKDPQIR|AY 0.098 . PVX_085705 252 QMEIVDK|IK 0.067 . PVX_085705 254 EIVDKIK|EI 0.064 . PVX_085705 272 EYNLLLK|YY 0.067 . PVX_085705 277 LKYYDVK|NV 0.073 . PVX_085705 293 GSITMGK|SS 0.078 . PVX_085705 303 LQSLLEK|ED 0.060 . PVX_085705 325 EDIILLK|MK 0.054 . PVX_085705 327 IILLKMK|KE 0.054 . PVX_085705 328 ILLKMKK|EL 0.115 . PVX_085705 335 ELSTNLK|NK 0.076 . PVX_085705 337 STNLKNK|FD 0.116 . PVX_085705 342 NKFDEEK|EK 0.062 . PVX_085705 344 FDEEKEK|LM 0.060 . PVX_085705 348 KEKLMIR|EC 0.077 . PVX_085705 355 ECISNLK|KK 0.057 . PVX_085705 356 CISNLKK|KI 0.178 . PVX_085705 357 ISNLKKK|IG 0.158 . PVX_085705 361 KKKIGEK|TD 0.067 . PVX_085705 370 HEILSDK|FF 0.063 . PVX_085705 374 SDKFFAK|FQ 0.095 . PVX_085705 378 FAKFQSK|RS 0.071 . PVX_085705 379 AKFQSKR|SH 0.436 . PVX_085705 392 ASAAILR|EL 0.081 . PVX_085705 396 ILRELNK|FS 0.072 . PVX_085705 424 LSIPFGK|YA 0.080 . PVX_085705 437 DISACER|TL 0.090 . PVX_085705 441 CERTLTK|SH 0.067 . PVX_085705 450 YGLHQVK|RY 0.058 . PVX_085705 451 GLHQVKR|YI 0.306 . PVX_085705 464 GLYILNK|NV 0.084 . PVX_085705 467 ILNKNVK|PK 0.066 . PVX_085705 469 NKNVKPK|IL 0.087 . PVX_085705 481 GYPGIGK|TS 0.053 . PVX_085705 486 GKTSICK|SI 0.090 . PVX_085705 514 NELIGHR|RT 0.064 . PVX_085705 515 ELIGHRR|TY 0.110 . PVX_085705 524 VNSYEGR|IV 0.180 . PVX_085705 546 VLDELDK|IS 0.060 . PVX_085705 568 FDSSQNK|GY 0.081 . PVX_085705 571 SQNKGYK|DV 0.117 . PVX_085705 583 FPINIGR|AF 0.096 . PVX_085705 603 PETLLDR|ME 0.063 . PVX_085705 617 PYTNEEK|VF 0.053 . PVX_085705 622 EKVFIFK|NY 0.060 . PVX_085705 626 IFKNYLK|KK 0.063 . PVX_085705 627 FKNYLKK|KI 0.115 . PVX_085705 628 KNYLKKK|IQ 0.128 . PVX_085705 634 KIQEETK|VT 0.072 . PVX_085705 661 TNENGLR|QF 0.097 . PVX_085705 672 IVYSVYK|RR 0.056 . PVX_085705 673 VYSVYKR|RA 0.210 . PVX_085705 674 YSVYKRR|AF 0.126 . PVX_085705 680 RAFMLLK|GL 0.068 . PVX_085705 685 LKGLTGK|VH 0.059 . PVX_085705 704 DYVSFER|LQ 0.068 . PVX_085705 708 FERLQQR|GS 0.121 . PVX_085705 723 GHEGMIK|SI 0.090 . PVX_085705 763 CAEVLPK|CT 0.079 . PVX_085705 780 MHPSWSR|SQ 0.101 . PVX_085705 797 HPQALLR|SS 0.124 . PVX_085705 803 RSSQLGK|TV 0.083 . PVX_085705 811 VTEDACR|GG 0.088 . PVX_085705 839 NPPFAMR|KA 0.111 . PVX_085705 840 PPFAMRK|AA 0.120 . PVX_085705 847 AAEGTHR|TQ 0.075 . PVX_085705 853 RTQPLQR|SR 0.147 . PVX_085705 855 QPLQRSR|SW 0.172 . PVX_085705 873 ITGNVGK|IM 0.065 . PVX_085705 891 FATQLLK|RV 0.065 . PVX_085705 892 ATQLLKR|VA 0.171 . PVX_085705 912 LSECDVK|KD 0.066 . PVX_085705 913 SECDVKK|DG 0.118 . PVX_085705 932 ILSYHLR|TA 0.109 . PVX_085705 953 LNGHVLK|IG 0.087 . PVX_085705 960 IGGLVEK|MI 0.066 . PVX_085705 965 EKMILAR|NF 0.098 . PVX_085705 970 ARNFGIR|TL 0.110 . PVX_085705 976 RTLIIPR|DN 0.083 . PVX_085705 980 IPRDNAR|EY 0.109 . PVX_085705 990 LLPSAVK|GN 0.063 . PVX_085705 994 AVKGNIR|VL 0.077 . PVX_085705 1011 FNFLFPK|FG 0.059 . ____________________________^_________________

  • Fasta :-

    >PVX_085705 ATGCGCCCCCTGACTAGCTTGCTCAAATGTAGAAGAGAAATCTGCAGAACTGGTCGACAA CACTACCGGTGCGTAAAGCTGCGCGGAAAGAATGACACACAACTGGTGAGTGCAATCGTT GGGGGGAAAGAAGTGGAGTGTTTTTCTCTGCTAAATAAGCCCCTCTTTCCTGGCCTCTCC TACGTGCTGAACGCGGATGGAAACCTCGTGAGGCTTTTCGAAAAGTGCAAAAGGAAAAGT GCGCACATAGGGCTCTTTCTCTTAAAAAGTGTGGGAAATGAGAAAGAAGGAGGCCTCTTT AATGAGGCACACTTTAAAATGGATGTTCCCATCGGAGGGAAGCCCTTTTTGAAGAAAGAC ATAGCCTTCATTAAGGATGTAGGGGAGGTGCACCACTGCGGATCGGTGGGGGTTATCCGG GAGGTCCTCTACAAAGGTGGTCATCCGAGAGGTGAAACGGAGGGGAGAAGCATCCCCATA GGGAAGACCCCCCACAGGAGTAGCTCAATGGATACCACAGAAGGAGTAACCTGTAAGGAC AATTCCAACGATGAGAGGGAGCGAAACCAAAGGAGGGGCCCCCTATTGGACCACTCCCAA CACATGCACCAAGTCGTCATTGAAATTGCGGAAAAGGTAAAAATTGTAAAGTGGGTTAAG GGAAACACAGCCCAGGTGGACGCAATTAAGCGGCAAATGTACAGCCAACAAAAGGACCCA CAGATAAGAGCTTACCAAATGGAGATCGTAGACAAAATAAAAGAAATTATTTACCTGAAC AGTGCATGCAGCGTTGAATATAATTTACTGCTAAAATATTATGACGTGAAAAATGTATAC AGTTTGGTCAACCTGGTAGGCAGCATAACGATGGGAAAAAGTAGCTCCCTTCAGAGTTTG CTCGAAAAGGAGGATGTAGAGGACCAGCTAGCCATCTGCTTGGAGCTACTAAATGAAGAT ATTATTCTCTTAAAAATGAAAAAAGAATTATCGACAAATTTGAAGAACAAATTTGATGAA GAGAAGGAGAAGCTAATGATAAGGGAGTGCATCTCCAACTTGAAGAAAAAAATAGGGGAA AAAACGGACCACGAAATTTTAAGCGATAAATTTTTTGCAAAATTTCAATCGAAGAGGAGT CACATGGGTGAAGAAGCTTCCGCCGCTATCCTGCGCGAACTTAACAAATTCTCCCTGTAC AGCGAACACTGCAGTGATTACGCGTCAACATATCAGTACCTCAACACCGTGCTGAGCATC CCCTTTGGGAAATATGCCCCCCTGTGTGAAGACATCAGTGCATGCGAAAGGACGCTAACG AAAAGCCACTACGGATTACACCAAGTGAAGAGGTACATTTTAGAATATGTAGGGCTGTAC ATACTAAATAAAAATGTGAAGCCGAAAATACTCACCCTTGTTGGTTACCCAGGCATTGGG AAAACGTCCATCTGTAAATCCATCAGCTCGGCGTTACAACTCCCCCACTGTATAATCAAC ATGAATAACATCACCAGCATGAATGAACTCATTGGGCACAGAAGAACCTACGTGAATAGC TACGAAGGGAGAATCGTTCAAGCGCTCATCTCAACGGATGTAATGAACCCCCTAATCGTC TTGGACGAATTAGACAAAATTTCCTTCACAAATGGAAACGTATATAGTGCTCTCCTAAAT CTTTTCGATAGCTCACAAAATAAGGGGTATAAAGATGTGTACGTGAATTTCCCCATCAAT ATAGGGAGAGCCTTTTTTATTTGCACAGCCAACTCGGTTGAGCACATCCCAGAGACGCTG CTCGACAGAATGGAAGTTGTACATGTGTATCCCTACACCAATGAGGAAAAGGTTTTTATT TTTAAAAATTATTTGAAGAAAAAAATACAGGAAGAAACTAAAGTTACCGATGAATATCTG CACATCTCGGAGGGGCTCCTCCTCTATGTTATCCAAAATTATACCAACGAAAATGGCCTG CGGCAGTTTTACTCTATTGTTTATAGCGTCTACAAGAGGAGGGCCTTCATGCTGCTAAAG GGGCTTACGGGGAAAGTCCATTTGGGCGTCCACAATTTGCACCTCTTCCACGACTATGTG AGTTTCGAGCGTCTCCAGCAGCGGGGGAGCATTGCAGTCACTCCCTGTGGGCATGAGGGC ATGATAAAGTCGATCGCCTTCACGGAGGATGGCGGCCAGGTGGTCACCATAGAGGTGGTT GGCCTCGCGTGGGGAAACTCCCACTCGGAAGGTTCTTCCAACCTGCACTGCGCTGAGGTA TTGCCAAAGTGTACTACTCAGGGAGAGGAACTCCTCCTAATGCATCCCTCCTGGAGTAGG AGCCAATTCGCCATGGCGGACGAGACGATGCACCCACAAGCGCTGTTGCGCTCGTCCCAA TTGGGGAAAACGGTTACAGAAGATGCGTGTCGCGGAGGAATAGCCGCAGTCGCCACCTCC TCAGATATGGTGGAGCCCCCCCTCATAGAAGGTGGCAACCCCCCTTTTGCGATGAGGAAG GCAGCGGAAGGTACCCATAGGACCCAACCGCTGCAGAGAAGTCGCTCGTGGGAGCCCCAC CCAAATGGCCAAATCGTCATAACCGGAAACGTGGGGAAGATCATGCAAGAAAGCATCCTC ATCGCGAATACCTTTGCCACCCAGCTGCTAAAGAGGGTAGCTCCCAATTTTCAGGGCCAA CACTTGCACATCAATTTGAGCGAGTGTGATGTGAAGAAGGATGGGCCCAGTGCAGGGGTC AATTTCGTTACGTCCATTTTGTCCTACCACCTAAGAACGGCGGTGAGCAGCTCCGTATGC ATGACTGGGGAGATAACCCTTAACGGCCATGTGCTGAAAATTGGGGGGCTCGTAGAAAAA ATGATCCTTGCGAGAAATTTCGGAATACGCACATTGATCATTCCCAGGGATAATGCGCGG GAGTACGAGCTGCTGCCAAGTGCTGTGAAGGGAAACATCCGGGTGCTATACGTCCACCAC TACTGCCAAATATTTAATTTCCTTTTCCCCAAGTTTGGCCCCCTACCGCCGTAG
  • Download Fasta

  • Fasta :-

    MRPLTSLLKCRREICRTGRQHYRCVKLRGKNDTQLVSAIVGGKEVECFSLLNKPLFPGLS YVLNADGNLVRLFEKCKRKSAHIGLFLLKSVGNEKEGGLFNEAHFKMDVPIGGKPFLKKD IAFIKDVGEVHHCGSVGVIREVLYKGGHPRGETEGRSIPIGKTPHRSSSMDTTEGVTCKD NSNDERERNQRRGPLLDHSQHMHQVVIEIAEKVKIVKWVKGNTAQVDAIKRQMYSQQKDP QIRAYQMEIVDKIKEIIYLNSACSVEYNLLLKYYDVKNVYSLVNLVGSITMGKSSSLQSL LEKEDVEDQLAICLELLNEDIILLKMKKELSTNLKNKFDEEKEKLMIRECISNLKKKIGE KTDHEILSDKFFAKFQSKRSHMGEEASAAILRELNKFSLYSEHCSDYASTYQYLNTVLSI PFGKYAPLCEDISACERTLTKSHYGLHQVKRYILEYVGLYILNKNVKPKILTLVGYPGIG KTSICKSISSALQLPHCIINMNNITSMNELIGHRRTYVNSYEGRIVQALISTDVMNPLIV LDELDKISFTNGNVYSALLNLFDSSQNKGYKDVYVNFPINIGRAFFICTANSVEHIPETL LDRMEVVHVYPYTNEEKVFIFKNYLKKKIQEETKVTDEYLHISEGLLLYVIQNYTNENGL RQFYSIVYSVYKRRAFMLLKGLTGKVHLGVHNLHLFHDYVSFERLQQRGSIAVTPCGHEG MIKSIAFTEDGGQVVTIEVVGLAWGNSHSEGSSNLHCAEVLPKCTTQGEELLLMHPSWSR SQFAMADETMHPQALLRSSQLGKTVTEDACRGGIAAVATSSDMVEPPLIEGGNPPFAMRK AAEGTHRTQPLQRSRSWEPHPNGQIVITGNVGKIMQESILIANTFATQLLKRVAPNFQGQ HLHINLSECDVKKDGPSAGVNFVTSILSYHLRTAVSSSVCMTGEITLNGHVLKIGGLVEK MILARNFGIRTLIIPRDNAREYELLPSAVKGNIRVLYVHHYCQIFNFLFPKFGPLPP

  • title: ATP binding site
  • coordinates: Y476,P477,G478,I479,G480,K481,T482,S483,D542,N591
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_085705574 YYKDVYVNFP0.99unspPVX_085705574 YYKDVYVNFP0.99unspPVX_085705574 YYKDVYVNFP0.99unspPVX_085705856 SQRSRSWEPH0.997unspPVX_085705168 SPHRSSSMDT0.998unspPVX_085705169 SHRSSSMDTT0.993unsp
PVX_085705      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India