PVX_085985 | DNA damage-inducible protein 1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_085985OTHER0.9997000.0003000.000001
No Results

  • Fasta :-

    >PVX_085985 MVFITISDDSKIITSLDVHEDTEIFTIVNIIENDFALNMNENELTYNGAPLNKFDTVKKL NINEGDLLFVRKKLSLDLMPQGNVSTQEGMAGMAGMAGIAAAGVGAASPSTGAGITPIPG SGVNAGGLNNAAFNALMEHFRTFQENEYIKKETEILLNIKNDRARMSVLQLQDKQLYDAI ASQNVEEVKKNVKEKLESEKKEKEREQRMYENALKDPLSEDAQKYIYENIYKNQINSNLA LAQEHFPEAFGVVYMLYIPVEINKNVVHAFVDSGAQSSIMSKQCAEKCNILRLMDRRFTG IAKGVGTKSILGKIHMVDIKIGNYFYAVSLTIIDEYDIDFIFGLDLLRRHQCRIDLKKNA LVIEDNEIPFLPEKDIIANSSHSIDFDDTKESTGGA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_085985.fa Sequence name : PVX_085985 Sequence length : 396 VALUES OF COMPUTED PARAMETERS Coef20 : 3.928 CoefTot : 0.112 ChDiff : -15 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.888 1.471 0.288 0.656 MesoH : 0.342 0.420 -0.183 0.326 MuHd_075 : 9.122 8.608 0.517 2.597 MuHd_095 : 6.452 4.855 1.402 1.779 MuHd_100 : 3.910 8.368 2.376 2.807 MuHd_105 : 10.484 12.250 4.382 3.960 Hmax_075 : 11.783 13.500 0.820 4.700 Hmax_095 : 6.737 13.300 1.143 4.436 Hmax_100 : 7.000 17.300 1.871 5.450 Hmax_105 : 7.117 21.000 2.280 6.417 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9565 0.0435 DFMC : 0.9567 0.0433
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 396 PVX_085985 MVFITISDDSKIITSLDVHEDTEIFTIVNIIENDFALNMNENELTYNGAPLNKFDTVKKLNINEGDLLFVRKKLSLDLMP 80 QGNVSTQEGMAGMAGMAGIAAAGVGAASPSTGAGITPIPGSGVNAGGLNNAAFNALMEHFRTFQENEYIKKETEILLNIK 160 NDRARMSVLQLQDKQLYDAIASQNVEEVKKNVKEKLESEKKEKEREQRMYENALKDPLSEDAQKYIYENIYKNQINSNLA 240 LAQEHFPEAFGVVYMLYIPVEINKNVVHAFVDSGAQSSIMSKQCAEKCNILRLMDRRFTGIAKGVGTKSILGKIHMVDIK 320 IGNYFYAVSLTIIDEYDIDFIFGLDLLRRHQCRIDLKKNALVIEDNEIPFLPEKDIIANSSHSIDFDDTKESTGGA 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_085985 11 TISDDSK|II 0.070 . PVX_085985 53 NGAPLNK|FD 0.064 . PVX_085985 58 NKFDTVK|KL 0.073 . PVX_085985 59 KFDTVKK|LN 0.088 . PVX_085985 71 GDLLFVR|KK 0.064 . PVX_085985 72 DLLFVRK|KL 0.083 . PVX_085985 73 LLFVRKK|LS 0.095 . PVX_085985 141 ALMEHFR|TF 0.098 . PVX_085985 150 QENEYIK|KE 0.064 . PVX_085985 151 ENEYIKK|ET 0.109 . PVX_085985 160 EILLNIK|ND 0.056 . PVX_085985 163 LNIKNDR|AR 0.092 . PVX_085985 165 IKNDRAR|MS 0.122 . PVX_085985 174 VLQLQDK|QL 0.073 . PVX_085985 189 QNVEEVK|KN 0.062 . PVX_085985 190 NVEEVKK|NV 0.141 . PVX_085985 193 EVKKNVK|EK 0.057 . PVX_085985 195 KKNVKEK|LE 0.085 . PVX_085985 200 EKLESEK|KE 0.058 . PVX_085985 201 KLESEKK|EK 0.111 . PVX_085985 203 ESEKKEK|ER 0.066 . PVX_085985 205 EKKEKER|EQ 0.111 . PVX_085985 208 EKEREQR|MY 0.377 . PVX_085985 215 MYENALK|DP 0.061 . PVX_085985 224 LSEDAQK|YI 0.069 . PVX_085985 232 IYENIYK|NQ 0.057 . PVX_085985 264 IPVEINK|NV 0.076 . PVX_085985 282 QSSIMSK|QC 0.068 . PVX_085985 287 SKQCAEK|CN 0.065 . PVX_085985 292 EKCNILR|LM 0.081 . PVX_085985 296 ILRLMDR|RF 0.090 . PVX_085985 297 LRLMDRR|FT 0.226 . PVX_085985 303 RFTGIAK|GV 0.085 . PVX_085985 308 AKGVGTK|SI 0.097 . PVX_085985 313 TKSILGK|IH 0.084 . PVX_085985 320 IHMVDIK|IG 0.058 . PVX_085985 348 FGLDLLR|RH 0.059 . PVX_085985 349 GLDLLRR|HQ 0.104 . PVX_085985 353 LRRHQCR|ID 0.114 . PVX_085985 357 QCRIDLK|KN 0.061 . PVX_085985 358 CRIDLKK|NA 0.151 . PVX_085985 374 IPFLPEK|DI 0.074 . PVX_085985 390 IDFDDTK|ES 0.063 . ____________________________^_________________

  • Fasta :-

    >PVX_085985 ATGGTCTTCATCACCATCTCCGACGACAGCAAGATCATAACCAGCCTGGACGTGCACGAA GACACGGAAATTTTCACCATCGTGAACATTATCGAAAATGACTTCGCGCTAAACATGAAC GAAAACGAATTGACGTACAACGGGGCGCCCCTCAACAAATTCGACACGGTGAAGAAGCTG AACATAAATGAAGGGGACCTGCTCTTCGTGAGGAAGAAGTTGAGTCTGGATTTGATGCCC CAAGGGAATGTTAGCACTCAGGAAGGCATGGCAGGAATGGCAGGAATGGCAGGAATTGCA GCAGCGGGGGTAGGGGCGGCTTCGCCCTCCACAGGGGCTGGAATCACGCCCATCCCTGGT AGCGGCGTCAACGCGGGAGGGTTAAACAATGCAGCGTTTAACGCGCTGATGGAGCATTTC CGCACATTTCAAGAAAACGAATATATAAAAAAAGAAACCGAAATTTTACTAAACATAAAA AACGACAGAGCCAGGATGAGTGTCCTACAATTACAAGACAAACAACTGTATGATGCTATA GCTAGCCAAAATGTAGAAGAAGTAAAAAAAAATGTAAAAGAAAAATTGGAAAGTGAAAAA AAAGAAAAAGAAAGAGAACAACGTATGTACGAAAATGCACTGAAAGATCCACTCTCAGAA GATGCACAAAAATATATTTATGAAAATATTTATAAAAATCAAATAAACTCAAATTTGGCA TTAGCACAGGAACATTTCCCAGAAGCATTTGGAGTTGTTTACATGTTATACATTCCTGTT GAAATAAATAAAAACGTCGTTCACGCTTTTGTAGATTCGGGAGCCCAGTCAAGTATCATG TCCAAGCAGTGTGCAGAAAAATGCAACATTTTGAGACTAATGGATAGGAGATTTACAGGA ATTGCCAAAGGAGTTGGTACCAAATCCATTTTGGGGAAAATACACATGGTCGATATAAAA ATTGGAAACTATTTCTACGCCGTTTCGCTAACCATCATTGATGAATATGATATTGATTTT ATTTTCGGCTTGGATTTGCTGAGGAGACACCAGTGCCGGATCGACTTGAAGAAAAACGCC CTCGTCATTGAGGATAATGAAATTCCATTCTTGCCGGAGAAGGACATCATTGCGAATTCG TCCCACAGCATTGACTTCGACGACACCAAGGAGTCTACGGGCGGGGCATAG
  • Download Fasta

  • Fasta :-

    MVFITISDDSKIITSLDVHEDTEIFTIVNIIENDFALNMNENELTYNGAPLNKFDTVKKL NINEGDLLFVRKKLSLDLMPQGNVSTQEGMAGMAGMAGIAAAGVGAASPSTGAGITPIPG SGVNAGGLNNAAFNALMEHFRTFQENEYIKKETEILLNIKNDRARMSVLQLQDKQLYDAI ASQNVEEVKKNVKEKLESEKKEKEREQRMYENALKDPLSEDAQKYIYENIYKNQINSNLA LAQEHFPEAFGVVYMLYIPVEINKNVVHAFVDSGAQSSIMSKQCAEKCNILRLMDRRFTG IAKGVGTKSILGKIHMVDIKIGNYFYAVSLTIIDEYDIDFIFGLDLLRRHQCRIDLKKNA LVIEDNEIPFLPEKDIIANSSHSIDFDDTKESTGGA

  • title: catalytic motif
  • coordinates: D272,S273,G274
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_085985T1110.5600.117PVX_085985T3930.5520.075PVX_085985T1160.5190.657
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_085985T1110.5600.117PVX_085985T3930.5520.075PVX_085985T1160.5190.657
IDSitePeptideScoreMethod
PVX_085985198 SEKLESEKKE0.996unsp
PVX_085985      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India