PVX_086040 | plasmepsin IV, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_086040OTHER0.9999740.0000040.000023
No Results

  • Fasta :-

    >PVX_086040 MDIAVKEQDYSNGLIKNSAAFENLKFSNIKNFKVQKRFQILYYILFVFVTGIFFFFLIST YFFTPNYKVNKIVQNTEHLTLAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQN YLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNL YDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPIYSS VEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKF YEGNITYEKLNHDLYWQIDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVI KVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSN TFILGDPFMRKYFTVFDYDKESVGFAIAKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_086040.fa Sequence name : PVX_086040 Sequence length : 450 VALUES OF COMPUTED PARAMETERS Coef20 : 3.462 CoefTot : 0.000 ChDiff : -13 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.724 2.571 0.473 0.985 MesoH : -0.395 0.412 -0.394 0.275 MuHd_075 : 33.119 22.849 10.947 6.645 MuHd_095 : 21.533 12.441 6.521 3.556 MuHd_100 : 31.692 15.802 8.470 4.787 MuHd_105 : 32.990 14.906 8.077 4.762 Hmax_075 : 2.800 11.200 -0.125 4.200 Hmax_095 : 3.600 9.500 0.152 3.420 Hmax_100 : 3.600 9.500 0.152 3.420 Hmax_105 : -0.175 2.975 -2.185 2.170 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9512 0.0488 DFMC : 0.9412 0.0588
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 450 PVX_086040 MDIAVKEQDYSNGLIKNSAAFENLKFSNIKNFKVQKRFQILYYILFVFVTGIFFFFLISTYFFTPNYKVNKIVQNTEHLT 80 LAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQNYLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGS 160 ANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPIYSS 240 VEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDL 320 DVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPI 400 LEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_086040 6 -MDIAVK|EQ 0.055 . PVX_086040 16 YSNGLIK|NS 0.069 . PVX_086040 25 AAFENLK|FS 0.061 . PVX_086040 30 LKFSNIK|NF 0.062 . PVX_086040 33 SNIKNFK|VQ 0.058 . PVX_086040 36 KNFKVQK|RF 0.061 . PVX_086040 37 NFKVQKR|FQ 0.171 . PVX_086040 68 FFTPNYK|VN 0.059 . PVX_086040 71 PNYKVNK|IV 0.093 . PVX_086040 84 HLTLAFK|IE 0.057 . PVX_086040 87 LAFKIER|PY 0.117 . PVX_086040 91 IERPYDK|VL 0.064 . PVX_086040 94 PYDKVLK|TI 0.064 . PVX_086040 98 VLKTISK|KN 0.055 . PVX_086040 99 LKTISKK|NL 0.098 . PVX_086040 102 ISKKNLK|NY 0.065 . PVX_086040 106 NLKNYIK|ET 0.066 . PVX_086040 113 ETFNFFK|SG 0.084 . PVX_086040 118 FKSGYMK|QN 0.069 . PVX_086040 151 VGDNHQK|FM 0.060 . PVX_086040 168 NLWVPSK|KC 0.063 . PVX_086040 169 LWVPSKK|CN 0.120 . PVX_086040 178 SSGCSIK|NL 0.075 . PVX_086040 185 NLYDSSK|SK 0.095 . PVX_086040 187 YDSSKSK|SY 0.117 . PVX_086040 191 KSKSYEK|DG 0.071 . PVX_086040 195 YEKDGTK|VD 0.058 . PVX_086040 206 YGSGTVK|GF 0.071 . PVX_086040 211 VKGFFSK|DL 0.081 . PVX_086040 224 HLSMPYK|FI 0.093 . PVX_086040 252 ILGLGWK|DL 0.072 . PVX_086040 267 PIVVELK|NQ 0.061 . PVX_086040 271 ELKNQNK|ID 0.062 . PVX_086040 299 IGGIEEK|FY 0.073 . PVX_086040 309 GNITYEK|LN 0.060 . PVX_086040 326 LDVHFGK|QT 0.086 . PVX_086040 331 GKQTMEK|AN 0.070 . PVX_086040 352 PSEFLNK|FF 0.059 . PVX_086040 361 ANLNVIK|VP 0.055 . PVX_086040 375 VTTCDNK|EM 0.055 . PVX_086040 383 MPTLEFK|SA 0.080 . PVX_086040 430 LGDPFMR|KY 0.091 . PVX_086040 431 GDPFMRK|YF 0.079 . PVX_086040 440 TVFDYDK|ES 0.053 . PVX_086040 449 VGFAIAK|N- 0.067 . ____________________________^_________________

  • Fasta :-

    >PVX_086040 ATGGATATAGCAGTGAAAGAACAAGACTACTCAAACGGACTTATAAAAAACTCAGCTGCG TTTGAAAATTTGAAATTTAGCAATATCAAAAATTTTAAAGTTCAGAAGAGATTCCAAATC CTGTATTACATTCTGTTTGTTTTCGTGACGGGGATCTTTTTCTTCTTTCTAATTAGTACC TACTTTTTTACCCCCAATTATAAGGTTAACAAAATCGTGCAAAACACGGAACATTTAACT TTAGCTTTTAAAATCGAGAGACCCTATGACAAGGTACTAAAAACGATATCCAAGAAAAAC CTGAAGAATTACATTAAGGAGACTTTTAACTTTTTCAAATCGGGTTATATGAAACAAAAC TACTTAGGAAGTGAAAATGATGTGATCGAATTAGATGATGTAGCAAACATTATGTTCTAT GGAGAAGGAGAAGTAGGAGACAACCACCAAAAGTTTATGCTCATCTTTGACACGGGTTCT GCCAACTTGTGGGTCCCAAGCAAAAAATGCAATAGCAGCGGATGCAGCATTAAAAATCTG TACGACTCTAGCAAGTCTAAGTCTTACGAAAAGGATGGAACCAAAGTTGACATTACTTAC GGATCTGGAACTGTGAAAGGTTTCTTCAGTAAGGATCTAGTTACCTTGGGACATTTGTCT ATGCCATACAAATTTATAGAAGTGACTGACACTGATGATTTAGAACCCATTTACAGCAGC GTCGAGTTTGATGGAATATTAGGTTTAGGATGGAAAGATCTCTCCATCGGATCAATTGAT CCCATCGTTGTGGAGTTGAAGAACCAAAACAAAATTGACAATGCCTTGTTTACCTTTTAC CTCCCTGTACATGACGTCCACGCTGGTTACCTAACCATTGGTGGAATTGAAGAGAAGTTT TACGAAGGAAACATCACTTATGAAAAATTGAATCACGACTTGTACTGGCAAATCGACTTA GATGTACATTTTGGAAAGCAAACTATGGAGAAGGCCAACGTCATCGTTGATAGTGGCACA ACTACTATTACCGCCCCTTCAGAATTTTTGAACAAATTTTTCGCTAACCTGAATGTTATT AAAGTTCCCTTCCTCCCATTCTACGTAACTACCTGTGACAACAAGGAAATGCCAACTTTG GAATTTAAATCAGCCAACAACACATATACCTTAGAACCCGAATACTACATGAACCCAATT CTTGAGGTGGATGACACCCTTTGCATGATCACCATGCTGCCAGTTGACATTGATTCGAAC ACCTTCATTTTGGGAGACCCATTCATGAGAAAGTACTTCACCGTTTTTGACTACGACAAG GAGAGTGTCGGTTTTGCCATCGCAAAGAATTAA
  • Download Fasta

  • Fasta :-

    MDIAVKEQDYSNGLIKNSAAFENLKFSNIKNFKVQKRFQILYYILFVFVTGIFFFFLIST YFFTPNYKVNKIVQNTEHLTLAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQN YLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNL YDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPIYSS VEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKF YEGNITYEKLNHDLYWQIDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVI KVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSN TFILGDPFMRKYFTVFDYDKESVGFAIAKN

  • title: catalytic residue
  • coordinates: D157,D337
No Results
No Results
IDSitePeptideScoreMethod
PVX_086040188 SSKSKSYEKD0.996unsp
PVX_086040      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India