PVX_087830 | cysteine-rich secretory protein, putative

UniProt_ID: A5KA64

Computed_GO_Component_IDs: GO:0005576
Computed_GO_Components: extracellular region
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PVX_087830	SP	0.011912	0.987500	0.000589	CS pos: 27-28. CKA-AA. Pr: 0.5517

No Results

Fasta :-
>PVX_087830 MVDRRLLHCLFALLCFLTLSRISFCKAAAGGFCSFNNDFIRERHNDLRLKHNADPLRWST QLEKAASVEAKLIKEISNCTVMVNQINTNYFTISPNSKVESAVDTWYEGINNYDFELGPI RRGDDTVFEFTRVIWKSAELIGCSSACCGNRGVLICKYDSNTNQPGHFADNVGTLDPMFV WENFTFAPEQRRPASGPSENGLPPSPIS
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_087830.fa Sequence name : PVX_087830 Sequence length : 208 VALUES OF COMPUTED PARAMETERS Coef20 : 4.982 CoefTot : 0.801 ChDiff : -2 ZoneTo : 37 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.524 2.024 0.470 0.563 MesoH : -0.884 0.095 -0.432 0.113 MuHd_075 : 30.384 19.500 8.837 7.932 MuHd_095 : 21.973 19.527 6.092 6.085 MuHd_100 : 17.437 18.499 5.453 6.112 MuHd_105 : 30.363 19.925 8.286 7.291 Hmax_075 : 20.475 23.000 4.222 7.420 Hmax_095 : 18.550 21.875 4.864 5.985 Hmax_100 : 19.500 24.700 5.446 6.990 Hmax_105 : 18.083 22.000 4.647 6.420 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4926 0.5074 DFMC : 0.6462 0.3538

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 208 PVX_087830 MVDRRLLHCLFALLCFLTLSRISFCKAAAGGFCSFNNDFIRERHNDLRLKHNADPLRWSTQLEKAASVEAKLIKEISNCT 80 VMVNQINTNYFTISPNSKVESAVDTWYEGINNYDFELGPIRRGDDTVFEFTRVIWKSAELIGCSSACCGNRGVLICKYDS 160 NTNQPGHFADNVGTLDPMFVWENFTFAPEQRRPASGPSENGLPPSPIS 240 ................................................................................ 80 ................................................................................ 160 ................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_087830 4 ---MVDR|RL 0.088 . PVX_087830 5 --MVDRR|LL 0.135 . PVX_087830 21 CFLTLSR|IS 0.064 . PVX_087830 26 SRISFCK|AA 0.102 . PVX_087830 41 FNNDFIR|ER 0.095 . PVX_087830 43 NDFIRER|HN 0.085 . PVX_087830 48 ERHNDLR|LK 0.096 . PVX_087830 50 HNDLRLK|HN 0.068 . PVX_087830 57 HNADPLR|WS 0.125 . PVX_087830 64 WSTQLEK|AA 0.069 . PVX_087830 71 AASVEAK|LI 0.091 . PVX_087830 74 VEAKLIK|EI 0.079 . PVX_087830 98 TISPNSK|VE 0.077 . PVX_087830 121 FELGPIR|RG 0.073 . PVX_087830 122 ELGPIRR|GD 0.182 . PVX_087830 132 TVFEFTR|VI 0.093 . PVX_087830 136 FTRVIWK|SA 0.102 . PVX_087830 151 SACCGNR|GV 0.115 . PVX_087830 157 RGVLICK|YD 0.063 . PVX_087830 191 TFAPEQR|RP 0.086 . PVX_087830 192 FAPEQRR|PA 0.127 . ____________________________^_________________

Fasta :-
>PVX_087830 ATGGTGGACAGACGCCTGCTGCACTGCCTTTTTGCCCTACTTTGCTTCTTAACCCTTTCG CGCATCTCCTTCTGTAAAGCAGCGGCTGGAGGTTTTTGCTCGTTTAACAATGACTTCATT CGAGAAAGACACAATGATTTGCGGCTGAAGCATAACGCGGATCCGTTGCGCTGGAGCACA CAGCTGGAAAAGGCGGCAAGCGTTGAAGCCAAACTGATAAAGGAGATCTCCAATTGCACT GTCATGGTGAACCAAATAAACACAAATTATTTTACCATTTCGCCCAACAGCAAAGTCGAA TCAGCCGTCGATACATGGTATGAAGGCATTAACAACTATGACTTTGAGTTAGGGCCCATC CGCCGGGGGGACGACACCGTTTTCGAATTCACCAGGGTTATATGGAAGAGCGCCGAGCTC ATCGGGTGCTCCAGCGCCTGCTGCGGTAACAGGGGGGTTTTAATTTGTAAATATGACAGC AACACGAATCAGCCAGGTCATTTCGCCGATAACGTTGGGACGCTTGACCCAATGTTCGTT TGGGAAAACTTCACATTCGCGCCGGAACAAAGACGACCAGCCAGTGGGCCAAGTGAGAAT GGCCTCCCCCCTTCGCCCATTTCATAA
Download Fasta

Fasta :-

MVDRRLLHCLFALLCFLTLSRISFCKAAAGGFCSFNNDFIRERHNDLRLKHNADPLRWST QLEKAASVEAKLIKEISNCTVMVNQINTNYFTISPNSKVESAVDTWYEGINNYDFELGPI RRGDDTVFEFTRVIWKSAELIGCSSACCGNRGVLICKYDSNTNQPGHFADNVGTLDPMFV WENFTFAPEQRRPASGPSENGLPPSPIS

PR-1-like

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_087830	S	208	0.691	0.035	PVX_087830	S	205	0.646	0.333	PVX_087830	S	198	0.583	0.218	PVX_087830	S	195	0.532	0.066

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	PVX_087830	S	208	0.691	0.035	PVX_087830	S	205	0.646	0.333	PVX_087830	S	198	0.583	0.218	PVX_087830	S	195	0.532	0.066

	ID	Site	Peptide	Score	Method
	PVX_087830	97 S	ISPNSKVES	0.996	unsp

PVX_087830

PVX_087830 | cysteine-rich secretory protein, putative

ID's

UniProt_ID: A5KA64

GEO Functions

Computed_GO_Component_IDs: GO:0005576

Computed_GO_Components: extracellular region

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

PR-1-like

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India