• Computed_GO_Component_IDs:  GO:0005576      

  • Computed_GO_Components:  extracellular region      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_087830SP0.0119120.9875000.000589CS pos: 27-28. CKA-AA. Pr: 0.5517
No Results
  • Fasta :-

    >PVX_087830 MVDRRLLHCLFALLCFLTLSRISFCKAAAGGFCSFNNDFIRERHNDLRLKHNADPLRWST QLEKAASVEAKLIKEISNCTVMVNQINTNYFTISPNSKVESAVDTWYEGINNYDFELGPI RRGDDTVFEFTRVIWKSAELIGCSSACCGNRGVLICKYDSNTNQPGHFADNVGTLDPMFV WENFTFAPEQRRPASGPSENGLPPSPIS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_087830.fa Sequence name : PVX_087830 Sequence length : 208 VALUES OF COMPUTED PARAMETERS Coef20 : 4.982 CoefTot : 0.801 ChDiff : -2 ZoneTo : 37 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.524 2.024 0.470 0.563 MesoH : -0.884 0.095 -0.432 0.113 MuHd_075 : 30.384 19.500 8.837 7.932 MuHd_095 : 21.973 19.527 6.092 6.085 MuHd_100 : 17.437 18.499 5.453 6.112 MuHd_105 : 30.363 19.925 8.286 7.291 Hmax_075 : 20.475 23.000 4.222 7.420 Hmax_095 : 18.550 21.875 4.864 5.985 Hmax_100 : 19.500 24.700 5.446 6.990 Hmax_105 : 18.083 22.000 4.647 6.420 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4926 0.5074 DFMC : 0.6462 0.3538
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 208 PVX_087830 MVDRRLLHCLFALLCFLTLSRISFCKAAAGGFCSFNNDFIRERHNDLRLKHNADPLRWSTQLEKAASVEAKLIKEISNCT 80 VMVNQINTNYFTISPNSKVESAVDTWYEGINNYDFELGPIRRGDDTVFEFTRVIWKSAELIGCSSACCGNRGVLICKYDS 160 NTNQPGHFADNVGTLDPMFVWENFTFAPEQRRPASGPSENGLPPSPIS 240 ................................................................................ 80 ................................................................................ 160 ................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_087830 4 ---MVDR|RL 0.088 . PVX_087830 5 --MVDRR|LL 0.135 . PVX_087830 21 CFLTLSR|IS 0.064 . PVX_087830 26 SRISFCK|AA 0.102 . PVX_087830 41 FNNDFIR|ER 0.095 . PVX_087830 43 NDFIRER|HN 0.085 . PVX_087830 48 ERHNDLR|LK 0.096 . PVX_087830 50 HNDLRLK|HN 0.068 . PVX_087830 57 HNADPLR|WS 0.125 . PVX_087830 64 WSTQLEK|AA 0.069 . PVX_087830 71 AASVEAK|LI 0.091 . PVX_087830 74 VEAKLIK|EI 0.079 . PVX_087830 98 TISPNSK|VE 0.077 . PVX_087830 121 FELGPIR|RG 0.073 . PVX_087830 122 ELGPIRR|GD 0.182 . PVX_087830 132 TVFEFTR|VI 0.093 . PVX_087830 136 FTRVIWK|SA 0.102 . PVX_087830 151 SACCGNR|GV 0.115 . PVX_087830 157 RGVLICK|YD 0.063 . PVX_087830 191 TFAPEQR|RP 0.086 . PVX_087830 192 FAPEQRR|PA 0.127 . ____________________________^_________________
  • Fasta :-

    >PVX_087830 ATGGTGGACAGACGCCTGCTGCACTGCCTTTTTGCCCTACTTTGCTTCTTAACCCTTTCG CGCATCTCCTTCTGTAAAGCAGCGGCTGGAGGTTTTTGCTCGTTTAACAATGACTTCATT CGAGAAAGACACAATGATTTGCGGCTGAAGCATAACGCGGATCCGTTGCGCTGGAGCACA CAGCTGGAAAAGGCGGCAAGCGTTGAAGCCAAACTGATAAAGGAGATCTCCAATTGCACT GTCATGGTGAACCAAATAAACACAAATTATTTTACCATTTCGCCCAACAGCAAAGTCGAA TCAGCCGTCGATACATGGTATGAAGGCATTAACAACTATGACTTTGAGTTAGGGCCCATC CGCCGGGGGGACGACACCGTTTTCGAATTCACCAGGGTTATATGGAAGAGCGCCGAGCTC ATCGGGTGCTCCAGCGCCTGCTGCGGTAACAGGGGGGTTTTAATTTGTAAATATGACAGC AACACGAATCAGCCAGGTCATTTCGCCGATAACGTTGGGACGCTTGACCCAATGTTCGTT TGGGAAAACTTCACATTCGCGCCGGAACAAAGACGACCAGCCAGTGGGCCAAGTGAGAAT GGCCTCCCCCCTTCGCCCATTTCATAA
  • Download Fasta
  • Fasta :-

    MVDRRLLHCLFALLCFLTLSRISFCKAAAGGFCSFNNDFIRERHNDLRLKHNADPLRWST QLEKAASVEAKLIKEISNCTVMVNQINTNYFTISPNSKVESAVDTWYEGINNYDFELGPI RRGDDTVFEFTRVIWKSAELIGCSSACCGNRGVLICKYDSNTNQPGHFADNVGTLDPMFV WENFTFAPEQRRPASGPSENGLPPSPIS

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_087830S2080.6910.035PVX_087830S2050.6460.333PVX_087830S1980.5830.218PVX_087830S1950.5320.066
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_087830S2080.6910.035PVX_087830S2050.6460.333PVX_087830S1980.5830.218PVX_087830S1950.5320.066
IDSitePeptideScoreMethod
PVX_08783097 SISPNSKVES0.996unsp
PVX_087830      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India