PVX_088125 | aspartyl protease, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_088125SP0.0059280.9940350.000036CS pos: 26-27. ATC-HK. Pr: 0.8065
No Results

  • Fasta :-

    >PVX_088125 MKHMGGFRTLFCGALFLLQFWGEATCHKVYKVGSEPIPCSQCKDVRECSACLFEEQDSPH AIHLKLNKKKPSDHSNLKKHHDSLKLGGVKYYVKRGEGISGSLGNPSGHTLDDIDSINEE IRIRREESAGVGRNGAEVTAYGGSGPSDRFAGVQRHAHAGGVSGDMASGEQRGSDEIAKG ESFIDVKNAHAVVEQTEENVFLIPLKHLRDSQFVGTLLVGVPPQEIHPIFDTGSTNLWVV TTDCEEESCKKVKRYNPYKSKTFRRSFIGKNLHIVFGSGSISGSIGKETFVLGDHTVRNQ TFGLVESESNDSLNGDNIFDYIDFEGIVGLGFPEMLSAGKVSFFDNLLSQNKNLSPQFSF YISPEDNTSTFLVGGVSKSFYEGSIYMLPVVKEYYWEVELDGIYVGEKKICCEEKSYAIF DTGTSYNTMPSAQMKGFFDVVPSAPCTEENYQEVLKNYPVIKYLFGDLVIELLPEEYMIL NEESCIPAYMQIDVPSEKNHAYLLGSIAFMRHYYTVFVRGAGGQPSMVGVAKARAAAEAA QKVAE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_088125.fa Sequence name : PVX_088125 Sequence length : 545 VALUES OF COMPUTED PARAMETERS Coef20 : 4.086 CoefTot : -0.743 ChDiff : -17 ZoneTo : 22 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.312 1.341 0.178 0.585 MesoH : -0.269 0.302 -0.356 0.266 MuHd_075 : 22.079 13.003 5.499 6.129 MuHd_095 : 18.108 9.146 3.717 5.153 MuHd_100 : 20.460 14.038 3.123 5.682 MuHd_105 : 21.076 16.813 4.098 5.679 Hmax_075 : 20.500 18.200 4.515 7.190 Hmax_095 : 16.975 15.750 3.520 6.370 Hmax_100 : 19.300 15.600 3.057 7.130 Hmax_105 : 21.000 20.700 3.126 6.799 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6187 0.3813 DFMC : 0.7274 0.2726
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 545 PVX_088125 MKHMGGFRTLFCGALFLLQFWGEATCHKVYKVGSEPIPCSQCKDVRECSACLFEEQDSPHAIHLKLNKKKPSDHSNLKKH 80 HDSLKLGGVKYYVKRGEGISGSLGNPSGHTLDDIDSINEEIRIRREESAGVGRNGAEVTAYGGSGPSDRFAGVQRHAHAG 160 GVSGDMASGEQRGSDEIAKGESFIDVKNAHAVVEQTEENVFLIPLKHLRDSQFVGTLLVGVPPQEIHPIFDTGSTNLWVV 240 TTDCEEESCKKVKRYNPYKSKTFRRSFIGKNLHIVFGSGSISGSIGKETFVLGDHTVRNQTFGLVESESNDSLNGDNIFD 320 YIDFEGIVGLGFPEMLSAGKVSFFDNLLSQNKNLSPQFSFYISPEDNTSTFLVGGVSKSFYEGSIYMLPVVKEYYWEVEL 400 DGIYVGEKKICCEEKSYAIFDTGTSYNTMPSAQMKGFFDVVPSAPCTEENYQEVLKNYPVIKYLFGDLVIELLPEEYMIL 480 NEESCIPAYMQIDVPSEKNHAYLLGSIAFMRHYYTVFVRGAGGQPSMVGVAKARAAAEAAQKVAE 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_088125 2 -----MK|HM 0.076 . PVX_088125 8 KHMGGFR|TL 0.084 . PVX_088125 28 GEATCHK|VY 0.059 . PVX_088125 31 TCHKVYK|VG 0.081 . PVX_088125 43 IPCSQCK|DV 0.108 . PVX_088125 46 SQCKDVR|EC 0.118 . PVX_088125 65 PHAIHLK|LN 0.066 . PVX_088125 68 IHLKLNK|KK 0.054 . PVX_088125 69 HLKLNKK|KP 0.086 . PVX_088125 70 LKLNKKK|PS 0.130 . PVX_088125 78 SDHSNLK|KH 0.072 . PVX_088125 79 DHSNLKK|HH 0.112 . PVX_088125 85 KHHDSLK|LG 0.070 . PVX_088125 90 LKLGGVK|YY 0.060 . PVX_088125 94 GVKYYVK|RG 0.059 . PVX_088125 95 VKYYVKR|GE 0.265 . PVX_088125 122 SINEEIR|IR 0.085 . PVX_088125 124 NEEIRIR|RE 0.080 . PVX_088125 125 EEIRIRR|EE 0.432 . PVX_088125 133 ESAGVGR|NG 0.085 . PVX_088125 149 GSGPSDR|FA 0.278 . PVX_088125 155 RFAGVQR|HA 0.208 . PVX_088125 172 MASGEQR|GS 0.154 . PVX_088125 179 GSDEIAK|GE 0.066 . PVX_088125 187 ESFIDVK|NA 0.076 . PVX_088125 206 VFLIPLK|HL 0.067 . PVX_088125 209 IPLKHLR|DS 0.116 . PVX_088125 250 CEEESCK|KV 0.069 . PVX_088125 251 EEESCKK|VK 0.067 . PVX_088125 253 ESCKKVK|RY 0.069 . PVX_088125 254 SCKKVKR|YN 0.232 . PVX_088125 259 KRYNPYK|SK 0.086 . PVX_088125 261 YNPYKSK|TF 0.065 . PVX_088125 264 YKSKTFR|RS 0.131 . PVX_088125 265 KSKTFRR|SF 0.366 . PVX_088125 270 RRSFIGK|NL 0.112 . PVX_088125 287 ISGSIGK|ET 0.070 . PVX_088125 298 LGDHTVR|NQ 0.079 . PVX_088125 340 EMLSAGK|VS 0.052 . PVX_088125 352 NLLSQNK|NL 0.065 . PVX_088125 378 LVGGVSK|SF 0.079 . PVX_088125 392 YMLPVVK|EY 0.058 . PVX_088125 408 GIYVGEK|KI 0.067 . PVX_088125 409 IYVGEKK|IC 0.082 . PVX_088125 415 KICCEEK|SY 0.088 . PVX_088125 435 MPSAQMK|GF 0.131 . PVX_088125 456 NYQEVLK|NY 0.059 . PVX_088125 462 KNYPVIK|YL 0.084 . PVX_088125 498 IDVPSEK|NH 0.059 . PVX_088125 511 GSIAFMR|HY 0.118 . PVX_088125 519 YYTVFVR|GA 0.172 . PVX_088125 532 SMVGVAK|AR 0.080 . PVX_088125 534 VGVAKAR|AA 0.114 . PVX_088125 542 AAEAAQK|VA 0.066 . ____________________________^_________________

  • Fasta :-

    >PVX_088125 ATGAAGCACATGGGGGGGTTCAGGACGCTCTTCTGTGGAGCTCTATTTTTGCTCCAATTC TGGGGGGAGGCCACGTGCCATAAGGTATACAAGGTGGGTTCAGAACCCATCCCCTGTTCG CAGTGCAAGGACGTACGTGAATGCAGCGCGTGTCTGTTTGAGGAGCAGGATTCCCCACAT GCGATCCACTTGAAGCTGAATAAGAAGAAGCCAAGTGACCACAGCAATTTGAAGAAGCAC CACGATTCGCTGAAGCTCGGCGGGGTGAAGTACTACGTGAAGAGGGGAGAAGGAATTTCA GGCAGTCTGGGTAACCCCTCGGGGCACACCCTGGATGATATAGACAGCATTAACGAGGAG ATCAGGATCAGGCGGGAGGAGAGCGCCGGCGTGGGCAGGAACGGCGCAGAGGTTACCGCT TATGGGGGGAGTGGCCCGTCCGACCGCTTCGCGGGGGTGCAGAGGCACGCGCACGCGGGG GGGGTAAGCGGCGACATGGCGAGCGGCGAACAGAGGGGAAGCGACGAAATTGCGAAGGGC GAGAGCTTCATCGACGTGAAGAACGCCCACGCCGTGGTGGAGCAGACGGAAGAGAACGTC TTCCTAATCCCCCTGAAGCACCTGCGTGATAGCCAGTTCGTGGGGACTCTCCTCGTGGGG GTCCCCCCTCAAGAGATCCACCCCATCTTTGACACGGGCAGCACAAATCTGTGGGTGGTT ACAACAGACTGTGAGGAGGAGTCTTGCAAAAAGGTTAAGAGGTACAACCCGTATAAGTCC AAAACGTTTAGGAGATCATTCATAGGGAAGAACCTCCACATCGTATTCGGATCGGGTTCT ATTTCTGGGTCCATTGGGAAGGAAACGTTCGTCTTAGGAGACCATACAGTGCGCAACCAG ACGTTTGGGTTAGTGGAGAGTGAATCAAACGACAGCCTAAATGGAGACAATATATTTGAC TACATCGATTTTGAGGGCATTGTAGGGTTGGGGTTTCCAGAAATGCTATCAGCAGGGAAG GTCTCTTTTTTTGATAATCTACTGAGTCAGAATAAGAACTTATCTCCGCAGTTTTCCTTT TACATATCTCCGGAGGACAACACGTCTACCTTCCTAGTCGGTGGGGTGAGCAAGTCTTTT TACGAGGGCAGCATCTACATGCTTCCCGTGGTGAAGGAGTACTACTGGGAGGTGGAGTTG GATGGCATTTACGTGGGGGAGAAAAAAATTTGTTGTGAGGAGAAGAGCTACGCCATTTTT GACACGGGCACTTCGTATAACACCATGCCTAGTGCTCAGATGAAGGGGTTTTTTGATGTG GTTCCTTCTGCCCCCTGCACGGAGGAGAACTACCAGGAGGTGCTGAAGAACTACCCCGTG ATTAAGTACCTGTTTGGCGACTTGGTAATAGAGCTGCTGCCAGAGGAATACATGATTTTG AATGAGGAGAGCTGCATCCCGGCGTACATGCAAATTGACGTGCCCTCGGAGAAGAACCAC GCCTACCTGCTCGGCAGCATTGCCTTCATGCGGCACTACTACACGGTCTTCGTGCGCGGC GCGGGCGGGCAGCCCTCCATGGTCGGCGTCGCAAAGGCCAGAGCGGCGGCGGAGGCGGCG CAGAAGGTGGCCGAGTGA
  • Download Fasta

  • Fasta :-

    MKHMGGFRTLFCGALFLLQFWGEATCHKVYKVGSEPIPCSQCKDVRECSACLFEEQDSPH AIHLKLNKKKPSDHSNLKKHHDSLKLGGVKYYVKRGEGISGSLGNPSGHTLDDIDSINEE IRIRREESAGVGRNGAEVTAYGGSGPSDRFAGVQRHAHAGGVSGDMASGEQRGSDEIAKG ESFIDVKNAHAVVEQTEENVFLIPLKHLRDSQFVGTLLVGVPPQEIHPIFDTGSTNLWVV TTDCEEESCKKVKRYNPYKSKTFRRSFIGKNLHIVFGSGSISGSIGKETFVLGDHTVRNQ TFGLVESESNDSLNGDNIFDYIDFEGIVGLGFPEMLSAGKVSFFDNLLSQNKNLSPQFSF YISPEDNTSTFLVGGVSKSFYEGSIYMLPVVKEYYWEVELDGIYVGEKKICCEEKSYAIF DTGTSYNTMPSAQMKGFFDVVPSAPCTEENYQEVLKNYPVIKYLFGDLVIELLPEEYMIL NEESCIPAYMQIDVPSEKNHAYLLGSIAFMRHYYTVFVRGAGGQPSMVGVAKARAAAEAA QKVAE

  • title: catalytic residue
  • coordinates: D231,D421
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_088125174 SEQRGSDEIA0.993unspPVX_088125363 SSFYISPEDN0.998unsp
PVX_088125      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India