PVX_088815 | PST-A protein

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_IDPredictionOTHERSPmTPCS_Position
PVX_088815OTHER0.9999700.0000200.000009
No Results

  • Fasta :-

    >PVX_088815 MADSATYNKELDVKPYTRLDGEPRLDSFFNKDGLLLRTYGWLVRNAIGIIILIHGLGSHA RLTFLRHNVEIVSKDKAILKDGNNFYVYKDSWIEHFNKSGYSVYALDLQGHGLSDGWDNL KANVKKFDDFAFDVLQYIAKIQDSLAYGDNKYGGTSSDNVNQRINKKRLPTYIVGMSMGG NIALRTLQLLGKSNSDANKRLNIKGCVSISGMISVELLTSPGSHTYQLIFLPLSNIISDI FQNSRLISVLPFQRYPYINDILKFDKIRFKGGITYRFGRELLNAMGNLDMDIEYTPRSIP ILFIHSKDDPFCYWGGVVSFYNRLKVRYKELHLLENMEHVLTVEPGNMSVLNSVLEWLAS ISGGAVKDKPNDDQQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_088815.fa Sequence name : PVX_088815 Sequence length : 375 VALUES OF COMPUTED PARAMETERS Coef20 : 3.469 CoefTot : 0.141 ChDiff : 4 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.153 1.571 0.202 0.623 MesoH : -0.154 0.446 -0.264 0.241 MuHd_075 : 33.767 13.478 8.249 7.059 MuHd_095 : 22.190 10.186 4.599 3.901 MuHd_100 : 18.614 9.262 4.064 3.745 MuHd_105 : 4.833 3.546 1.563 1.882 Hmax_075 : 0.700 1.983 -1.938 1.972 Hmax_095 : 1.837 2.712 -1.887 1.435 Hmax_100 : -1.300 1.200 -2.293 1.000 Hmax_105 : -11.700 -1.600 -4.513 0.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9575 0.0425 DFMC : 0.9522 0.0478
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 375 PVX_088815 MADSATYNKELDVKPYTRLDGEPRLDSFFNKDGLLLRTYGWLVRNAIGIIILIHGLGSHARLTFLRHNVEIVSKDKAILK 80 DGNNFYVYKDSWIEHFNKSGYSVYALDLQGHGLSDGWDNLKANVKKFDDFAFDVLQYIAKIQDSLAYGDNKYGGTSSDNV 160 NQRINKKRLPTYIVGMSMGGNIALRTLQLLGKSNSDANKRLNIKGCVSISGMISVELLTSPGSHTYQLIFLPLSNIISDI 240 FQNSRLISVLPFQRYPYINDILKFDKIRFKGGITYRFGRELLNAMGNLDMDIEYTPRSIPILFIHSKDDPFCYWGGVVSF 320 YNRLKVRYKELHLLENMEHVLTVEPGNMSVLNSVLEWLASISGGAVKDKPNDDQQ 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_088815 9 DSATYNK|EL 0.065 . PVX_088815 14 NKELDVK|PY 0.059 . PVX_088815 18 DVKPYTR|LD 0.080 . PVX_088815 24 RLDGEPR|LD 0.081 . PVX_088815 31 LDSFFNK|DG 0.073 . PVX_088815 37 KDGLLLR|TY 0.089 . PVX_088815 44 TYGWLVR|NA 0.099 . PVX_088815 61 GLGSHAR|LT 0.095 . PVX_088815 66 ARLTFLR|HN 0.087 . PVX_088815 74 NVEIVSK|DK 0.065 . PVX_088815 76 EIVSKDK|AI 0.066 . PVX_088815 80 KDKAILK|DG 0.061 . PVX_088815 89 NNFYVYK|DS 0.081 . PVX_088815 98 WIEHFNK|SG 0.074 . PVX_088815 121 DGWDNLK|AN 0.061 . PVX_088815 125 NLKANVK|KF 0.063 . PVX_088815 126 LKANVKK|FD 0.171 . PVX_088815 140 VLQYIAK|IQ 0.063 . PVX_088815 151 LAYGDNK|YG 0.073 . PVX_088815 163 SDNVNQR|IN 0.143 . PVX_088815 166 VNQRINK|KR 0.085 . PVX_088815 167 NQRINKK|RL 0.102 . PVX_088815 168 QRINKKR|LP 0.265 . PVX_088815 185 GGNIALR|TL 0.084 . PVX_088815 192 TLQLLGK|SN 0.098 . PVX_088815 199 SNSDANK|RL 0.075 . PVX_088815 200 NSDANKR|LN 0.168 . PVX_088815 204 NKRLNIK|GC 0.063 . PVX_088815 245 DIFQNSR|LI 0.084 . PVX_088815 254 SVLPFQR|YP 0.073 . PVX_088815 263 YINDILK|FD 0.062 . PVX_088815 266 DILKFDK|IR 0.066 . PVX_088815 268 LKFDKIR|FK 0.147 . PVX_088815 270 FDKIRFK|GG 0.068 . PVX_088815 276 KGGITYR|FG 0.107 . PVX_088815 279 ITYRFGR|EL 0.241 . PVX_088815 297 DIEYTPR|SI 0.111 . PVX_088815 307 ILFIHSK|DD 0.069 . PVX_088815 323 VVSFYNR|LK 0.072 . PVX_088815 325 SFYNRLK|VR 0.064 . PVX_088815 327 YNRLKVR|YK 0.111 . PVX_088815 329 RLKVRYK|EL 0.076 . PVX_088815 367 ISGGAVK|DK 0.066 . PVX_088815 369 GGAVKDK|PN 0.098 . ____________________________^_________________

  • Fasta :-

    >PVX_088815 ATGGCTGATAGTGCCACATACAACAAAGAGTTAGATGTAAAACCTTACACTAGACTGGAT GGAGAGCCAAGGCTTGATTCATTCTTCAATAAGGATGGGTTGTTGTTGCGGACGTACGGA TGGCTAGTGAGAAATGCTATAGGCATTATAATATTAATTCATGGTTTAGGTTCACATGCG AGATTGACCTTTTTAAGACATAACGTTGAGATAGTAAGTAAGGATAAAGCCATATTAAAA GATGGAAATAATTTTTACGTTTATAAAGACAGTTGGATAGAACATTTTAATAAAAGCGGT TATTCAGTATATGCCCTAGATTTACAAGGTCACGGACTGTCTGATGGATGGGACAATTTA AAAGCTAACGTAAAAAAGTTTGATGATTTTGCCTTCGACGTATTGCAGTATATTGCTAAA ATTCAAGACTCATTGGCTTATGGTGATAATAAGTATGGTGGAACTTCCTCTGATAATGTT AATCAAAGAATTAATAAGAAAAGGCTTCCAACATACATTGTGGGTATGTCCATGGGCGGA AATATTGCATTAAGGACATTACAATTATTGGGGAAGTCCAATAGCGATGCAAATAAAAGG TTAAATATAAAAGGGTGTGTCTCCATATCTGGAATGATTTCTGTAGAATTATTAACGTCT CCAGGTTCACATACGTATCAATTAATTTTTTTACCCTTATCGAATATTATTTCTGATATT TTTCAAAACTCAAGACTTATTTCGGTGTTGCCTTTTCAAAGGTATCCATACATTAATGAC ATTTTAAAGTTTGATAAAATACGTTTCAAAGGAGGGATAACCTATCGATTTGGTCGCGAA CTCCTAAATGCAATGGGGAACTTAGACATGGATATTGAATATACTCCTAGGAGTATTCCT ATTTTGTTTATTCATTCAAAAGATGACCCATTTTGTTACTGGGGAGGCGTAGTATCGTTT TATAATAGACTGAAAGTTCGTTATAAAGAGTTGCACCTTTTAGAAAACATGGAGCATGTA TTAACTGTGGAACCGGGAAATATGAGCGTTTTAAATAGTGTTTTGGAATGGCTTGCTAGC ATATCCGGAGGCGCAGTAAAGGACAAACCGAATGATGATCAGCAGTGA
  • Download Fasta

  • Fasta :-

    MADSATYNKELDVKPYTRLDGEPRLDSFFNKDGLLLRTYGWLVRNAIGIIILIHGLGSHA RLTFLRHNVEIVSKDKAILKDGNNFYVYKDSWIEHFNKSGYSVYALDLQGHGLSDGWDNL KANVKKFDDFAFDVLQYIAKIQDSLAYGDNKYGGTSSDNVNQRINKKRLPTYIVGMSMGG NIALRTLQLLGKSNSDANKRLNIKGCVSISGMISVELLTSPGSHTYQLIFLPLSNIISDI FQNSRLISVLPFQRYPYINDILKFDKIRFKGGITYRFGRELLNAMGNLDMDIEYTPRSIP ILFIHSKDDPFCYWGGVVSFYNRLKVRYKELHLLENMEHVLTVEPGNMSVLNSVLEWLAS ISGGAVKDKPNDDQQ

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PVX_088815      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India