PVX_090055 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
PVX_090055OTHER0.9999960.0000030.000001
No Results

  • Fasta :-

    >PVX_090055 MEDPLGEATCRSVERIFDGVSFNKSDRKKLQFEDKKLNRFFENGMLNYSLVEVVGVPGSG KTQFALTLCAELLLKMIDEERQAIVFYVYFNRMFPMRRLEEIIESKLGSRRRRAQGGADK VRRGNGACGCSQGGNEKRMEQMEQVGEVCTTEEVSPAEEVGNRGELGQTHPEHAQNFPAR SALKNLYIQKINDERDFFQLIKKDIHYILKHHKISLLVVDSLNSLFNGNDHLDAYRKCQL FTGVSQSLKQLAYENNFFLLVLNSWQPRRDYIHFSFNIFDYVINSSFSNTIIFLKKRKRS NEIDRRMTIRCSEFLRKYKSMRFEIGDSGFSAS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_090055.fa Sequence name : PVX_090055 Sequence length : 333 VALUES OF COMPUTED PARAMETERS Coef20 : 3.531 CoefTot : 0.000 ChDiff : 8 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.800 1.147 0.050 0.506 MesoH : -0.901 0.215 -0.490 0.155 MuHd_075 : 8.673 2.805 3.586 2.145 MuHd_095 : 61.065 30.873 13.519 10.927 MuHd_100 : 47.769 24.768 11.247 8.815 MuHd_105 : 30.980 16.198 8.635 6.289 Hmax_075 : -9.500 -0.233 -2.877 1.190 Hmax_095 : 16.625 15.312 2.575 5.101 Hmax_100 : 6.200 10.700 1.560 4.490 Hmax_105 : 4.400 11.783 2.079 4.165 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3709 0.6291 DFMC : 0.8137 0.1863
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 333 PVX_090055 MEDPLGEATCRSVERIFDGVSFNKSDRKKLQFEDKKLNRFFENGMLNYSLVEVVGVPGSGKTQFALTLCAELLLKMIDEE 80 RQAIVFYVYFNRMFPMRRLEEIIESKLGSRRRRAQGGADKVRRGNGACGCSQGGNEKRMEQMEQVGEVCTTEEVSPAEEV 160 GNRGELGQTHPEHAQNFPARSALKNLYIQKINDERDFFQLIKKDIHYILKHHKISLLVVDSLNSLFNGNDHLDAYRKCQL 240 FTGVSQSLKQLAYENNFFLLVLNSWQPRRDYIHFSFNIFDYVINSSFSNTIIFLKKRKRSNEIDRRMTIRCSEFLRKYKS 320 MRFEIGDSGFSAS 400 ................................................................................ 80 ................................P............................................... 160 ................................................................................ 240 ................................................................................ 320 ............. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_090055 11 LGEATCR|SV 0.260 . PVX_090055 15 TCRSVER|IF 0.116 . PVX_090055 24 DGVSFNK|SD 0.080 . PVX_090055 27 SFNKSDR|KK 0.099 . PVX_090055 28 FNKSDRK|KL 0.076 . PVX_090055 29 NKSDRKK|LQ 0.100 . PVX_090055 35 KLQFEDK|KL 0.069 . PVX_090055 36 LQFEDKK|LN 0.089 . PVX_090055 39 EDKKLNR|FF 0.118 . PVX_090055 61 GVPGSGK|TQ 0.058 . PVX_090055 75 CAELLLK|MI 0.064 . PVX_090055 81 KMIDEER|QA 0.085 . PVX_090055 92 FYVYFNR|MF 0.073 . PVX_090055 97 NRMFPMR|RL 0.151 . PVX_090055 98 RMFPMRR|LE 0.130 . PVX_090055 106 EEIIESK|LG 0.058 . PVX_090055 110 ESKLGSR|RR 0.075 . PVX_090055 111 SKLGSRR|RR 0.130 . PVX_090055 112 KLGSRRR|RA 0.192 . PVX_090055 113 LGSRRRR|AQ 0.676 *ProP* PVX_090055 120 AQGGADK|VR 0.056 . PVX_090055 122 GGADKVR|RG 0.093 . PVX_090055 123 GADKVRR|GN 0.273 . PVX_090055 137 SQGGNEK|RM 0.068 . PVX_090055 138 QGGNEKR|ME 0.193 . PVX_090055 163 AEEVGNR|GE 0.079 . PVX_090055 180 AQNFPAR|SA 0.275 . PVX_090055 184 PARSALK|NL 0.061 . PVX_090055 190 KNLYIQK|IN 0.060 . PVX_090055 195 QKINDER|DF 0.099 . PVX_090055 202 DFFQLIK|KD 0.057 . PVX_090055 203 FFQLIKK|DI 0.155 . PVX_090055 210 DIHYILK|HH 0.063 . PVX_090055 213 YILKHHK|IS 0.062 . PVX_090055 236 DHLDAYR|KC 0.066 . PVX_090055 237 HLDAYRK|CQ 0.067 . PVX_090055 249 GVSQSLK|QL 0.071 . PVX_090055 268 LNSWQPR|RD 0.104 . PVX_090055 269 NSWQPRR|DY 0.158 . PVX_090055 295 NTIIFLK|KR 0.056 . PVX_090055 296 TIIFLKK|RK 0.091 . PVX_090055 297 IIFLKKR|KR 0.162 . PVX_090055 298 IFLKKRK|RS 0.078 . PVX_090055 299 FLKKRKR|SN 0.361 . PVX_090055 305 RSNEIDR|RM 0.080 . PVX_090055 306 SNEIDRR|MT 0.115 . PVX_090055 310 DRRMTIR|CS 0.115 . PVX_090055 316 RCSEFLR|KY 0.096 . PVX_090055 317 CSEFLRK|YK 0.097 . PVX_090055 319 EFLRKYK|SM 0.169 . PVX_090055 322 RKYKSMR|FE 0.100 . ____________________________^_________________

  • Fasta :-

    >PVX_090055 ATGGAAGACCCGCTGGGAGAAGCCACGTGCAGATCTGTGGAGCGCATTTTTGACGGCGTC TCGTTTAACAAAAGTGACAGGAAAAAGCTCCAGTTCGAGGACAAGAAGCTAAACCGCTTC TTCGAAAATGGGATGCTGAATTACAGCCTGGTGGAGGTGGTGGGCGTGCCGGGCAGCGGA AAGACGCAGTTCGCCCTGACCCTCTGCGCAGAGCTCCTTTTAAAAATGATCGACGAGGAA AGACAGGCCATCGTTTTTTACGTGTACTTTAACCGAATGTTCCCCATGCGCAGGCTGGAA GAAATAATTGAGAGCAAGTTGGGGTCGAGGAGGAGACGTGCCCAGGGGGGTGCAGACAAG GTGCGAAGAGGCAACGGGGCGTGTGGCTGCTCCCAGGGGGGGAATGAAAAGAGGATGGAG CAGATGGAGCAGGTGGGAGAAGTATGCACAACGGAGGAGGTGAGCCCGGCGGAGGAAGTG GGTAACCGTGGTGAGCTAGGCCAAACGCACCCAGAACACGCGCAGAACTTCCCCGCCAGA AGCGCCCTGAAAAACTTGTACATACAAAAAATAAACGACGAAAGGGACTTCTTCCAGTTA ATAAAAAAAGACATACACTACATTTTGAAGCACCACAAGATTTCCCTCCTAGTGGTAGAT TCACTAAACTCTCTCTTTAATGGGAATGATCACCTAGACGCTTACAGAAAGTGCCAGCTG TTTACAGGGGTGTCTCAATCTCTAAAACAACTGGCGTATGAAAATAATTTTTTTTTATTA GTACTTAACAGCTGGCAGCCACGGAGGGACTACATCCATTTTTCCTTTAACATTTTTGAC TATGTAATTAACTCTTCCTTTTCCAACACGATTATATTTTTGAAGAAGAGGAAGAGAAGT AATGAAATTGATCGCAGGATGACCATCAGGTGTTCGGAGTTTTTACGCAAGTACAAATCG ATGCGCTTCGAAATTGGGGACTCGGGGTTCAGCGCGTCGTGA
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  • Fasta :-

    MEDPLGEATCRSVERIFDGVSFNKSDRKKLQFEDKKLNRFFENGMLNYSLVEVVGVPGSG KTQFALTLCAELLLKMIDEERQAIVFYVYFNRMFPMRRLEEIIESKLGSRRRRAQGGADK VRRGNGACGCSQGGNEKRMEQMEQVGEVCTTEEVSPAEEVGNRGELGQTHPEHAQNFPAR SALKNLYIQKINDERDFFQLIKKDIHYILKHHKISLLVVDSLNSLFNGNDHLDAYRKCQL FTGVSQSLKQLAYENNFFLLVLNSWQPRRDYIHFSFNIFDYVINSSFSNTIIFLKKRKRS NEIDRRMTIRCSEFLRKYKSMRFEIGDSGFSAS

  • title: ATP binding site
  • coordinates: V56,G60,K61,T62,C130,S131,D220,S221
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_090055308 TDRRMTIRCS0.995unspPVX_090055308 TDRRMTIRCS0.995unspPVX_090055308 TDRRMTIRCS0.995unspPVX_090055155 STEEVSPAEE0.996unspPVX_090055300 SKRKRSNEID0.996unsp
PVX_090055      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India