PVX_091245 | hypothetical protein, conserved

_IDPredictionOTHERSPmTPCS_Position
PVX_091245OTHER0.9999790.0000130.000007
No Results

  • Fasta :-

    >PVX_091245 MCHYETHAIETERGSINVYFEKQSKLYCLLHTANNILQAHVYSPDDFKDAESMLEYAAVG DTTLSGDQGDTTGRSHTDEISKKGCTAEDGNRGNRQPPHVRAKEALNCNNVLTYIKRGVH YFGNFNINILYLFMNKHNIELHWVDNKEIFRKINDSRGSACSPLFDDSQLNDKKLIAFVV NIVRVNLFDFYHHRHFYAIRKISGMWFQLDSSLSKPVLLPTNEDLNNHLMNIVKDNKFHK SDNYIIQVFKREKNHPK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_091245.fa Sequence name : PVX_091245 Sequence length : 257 VALUES OF COMPUTED PARAMETERS Coef20 : 3.468 CoefTot : -0.396 ChDiff : 1 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.712 1.606 -0.106 0.534 MesoH : -1.168 0.033 -0.588 0.105 MuHd_075 : 13.191 4.224 3.696 1.991 MuHd_095 : 15.541 7.044 1.646 2.564 MuHd_100 : 19.104 13.071 4.924 3.913 MuHd_105 : 20.975 16.408 7.187 4.411 Hmax_075 : -4.462 5.017 -1.185 2.053 Hmax_095 : 1.000 4.400 -1.656 2.840 Hmax_100 : 5.700 8.200 -0.733 2.870 Hmax_105 : 6.100 5.500 -0.988 2.650 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9928 0.0072 DFMC : 0.9873 0.0127
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 257 PVX_091245 MCHYETHAIETERGSINVYFEKQSKLYCLLHTANNILQAHVYSPDDFKDAESMLEYAAVGDTTLSGDQGDTTGRSHTDEI 80 SKKGCTAEDGNRGNRQPPHVRAKEALNCNNVLTYIKRGVHYFGNFNINILYLFMNKHNIELHWVDNKEIFRKINDSRGSA 160 CSPLFDDSQLNDKKLIAFVVNIVRVNLFDFYHHRHFYAIRKISGMWFQLDSSLSKPVLLPTNEDLNNHLMNIVKDNKFHK 240 SDNYIIQVFKREKNHPK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_091245 13 HAIETER|GS 0.095 . PVX_091245 22 INVYFEK|QS 0.058 . PVX_091245 25 YFEKQSK|LY 0.054 . PVX_091245 48 YSPDDFK|DA 0.084 . PVX_091245 74 QGDTTGR|SH 0.111 . PVX_091245 82 HTDEISK|KG 0.064 . PVX_091245 83 TDEISKK|GC 0.126 . PVX_091245 92 TAEDGNR|GN 0.088 . PVX_091245 95 DGNRGNR|QP 0.184 . PVX_091245 101 RQPPHVR|AK 0.090 . PVX_091245 103 PPHVRAK|EA 0.085 . PVX_091245 116 NVLTYIK|RG 0.053 . PVX_091245 117 VLTYIKR|GV 0.245 . PVX_091245 136 LYLFMNK|HN 0.055 . PVX_091245 147 LHWVDNK|EI 0.070 . PVX_091245 151 DNKEIFR|KI 0.100 . PVX_091245 152 NKEIFRK|IN 0.090 . PVX_091245 157 RKINDSR|GS 0.090 . PVX_091245 173 DSQLNDK|KL 0.062 . PVX_091245 174 SQLNDKK|LI 0.090 . PVX_091245 184 FVVNIVR|VN 0.063 . PVX_091245 194 FDFYHHR|HF 0.110 . PVX_091245 200 RHFYAIR|KI 0.122 . PVX_091245 201 HFYAIRK|IS 0.083 . PVX_091245 215 LDSSLSK|PV 0.065 . PVX_091245 234 HLMNIVK|DN 0.066 . PVX_091245 237 NIVKDNK|FH 0.055 . PVX_091245 240 KDNKFHK|SD 0.105 . PVX_091245 250 YIIQVFK|RE 0.056 . PVX_091245 251 IIQVFKR|EK 0.177 . PVX_091245 253 QVFKREK|NH 0.059 . PVX_091245 257 REKNHPK|-- 0.079 . ____________________________^_________________

  • Fasta :-

    >PVX_091245 CACGATTTAAAAAAAAAAAAAAAAAAAAAAAAACCTGTGCTCACATTTAACACTCATCGA TGATGCGTAATAATATGCCCATTTACCTCCCCATTCCGAAACAACAAAGTGCCATTCGCA CTTGAACAATCCGTGCCTCCCAAAATGTGCCACTATGAAACACACGCAATTGAAACGGAA AGAGGGTCGATAAACGTGTACTTTGAAAAGCAAAGCAAATTGTATTGCTTGCTCCACACT GCGAACAATATTTTACAGGCACATGTATACTCCCCCGACGATTTTAAAGACGCCGAAAGT ATGCTGGAGTATGCCGCTGTTGGGGATACCACGTTAAGCGGTGACCAGGGAGATACTACA GGGAGGAGCCACACTGATGAGATTAGCAAAAAGGGTTGCACCGCCGAAGATGGCAACCGT GGTAATAGGCAACCCCCCCATGTCAGAGCGAAGGAAGCGCTAAACTGCAATAACGTCCTC ACGTACATCAAAAGAGGCGTCCACTATTTTGGAAATTTCAACATCAACATTTTGTACTTG TTCATGAACAAGCACAATATTGAGCTGCACTGGGTTGATAACAAGGAGATATTTCGCAAA ATAAATGACAGCAGAGGAAGTGCCTGTTCCCCACTCTTCGATGACAGCCAGTTAAATGAC AAAAAGCTAATCGCATTCGTGGTGAACATCGTTCGGGTGAACCTTTTCGATTTCTACCAC CACCGGCATTTTTACGCCATAAGGAAAATCTCAGGGATGTGGTTCCAGCTGGATTCCTCG CTGAGTAAACCCGTTTTGCTACCCACAAATGAAGACTTAAACAATCACTTAATGAACATA GTAAAGGATAACAAATTTCACAAATCTGATAATTACATCATACAAGTTTTTAAGAGGGAG AAGAATCATCCCAAATAA
  • Download Fasta

  • Fasta :-

    MCHYETHAIETERGSINVYFEKQSKLYCLLHTANNILQAHVYSPDDFKDAESMLEYAAVG DTTLSGDQGDTTGRSHTDEISKKGCTAEDGNRGNRQPPHVRAKEALNCNNVLTYIKRGVH YFGNFNINILYLFMNKHNIELHWVDNKEIFRKINDSRGSACSPLFDDSQLNDKKLIAFVV NIVRVNLFDFYHHRHFYAIRKISGMWFQLDSSLSKPVLLPTNEDLNNHLMNIVKDNKFHK SDNYIIQVFKREKNHPK

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IDSitePeptideScoreMethod
PVX_09124575 STTGRSHTDE0.994unsp
PVX_091245      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India