PVX_091405 | vivapain-2

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_091405OTHER0.9993580.0006270.000015
No Results

  • Fasta :-

    >PVX_091405 MEYHMEYSNDKSHKPEKELFVEKSFGGRNGKGRKSLLVVLSVSAMCLLAGSAFYFTRTGK GNDGPLYGNALDESSSDDFIITSLLKSPGGKKFIVSKLQELIASYDEDVNSAKASPSKEG PTGAHSTSVATVSRQKQGNLKVPKKIEINFADSRFLMINLEKVNAFYLFMKEHGKKYKTE EEMQQRYLAFTENLARINSHNSKANILYKKGTNQYSDISFEEFRKTMLTLRFDLKKKLAN SPYVSNYDDVLKKYKPADAVVDNEKYDWREHNAVSEIKNQNLCGSCWAFGAVGAVESQYA IRKNQHVLISEQELVDCSDKNFGCFGGLASLAFDDMIDLGYLCSESDYPYVGFKPRKCEI KKCKEKYTIKSYVKIPEEKYKEAIQFLGPLTLGLTVNDDFYDYKEGIFSSECTEEPNHEV MIVGYGVEEMFNSESNASEKHYYYIIKNSWGENWGEKGFMRIETDELGLQKTNNMTEAYV PLLD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_091405.fa Sequence name : PVX_091405 Sequence length : 484 VALUES OF COMPUTED PARAMETERS Coef20 : 2.539 CoefTot : 0.000 ChDiff : -6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.100 2.271 0.460 0.684 MesoH : -0.494 0.314 -0.327 0.209 MuHd_075 : 8.204 5.661 1.232 0.926 MuHd_095 : 38.232 13.443 9.304 4.134 MuHd_100 : 34.964 13.512 8.327 4.027 MuHd_105 : 24.375 10.259 5.999 2.942 Hmax_075 : -18.900 -10.150 -8.637 -2.030 Hmax_095 : -3.400 -6.100 -5.048 -0.100 Hmax_100 : -3.400 -6.100 -4.847 -0.100 Hmax_105 : -5.200 -6.400 -4.847 -0.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9986 0.0014 DFMC : 0.9963 0.0037
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 484 PVX_091405 MEYHMEYSNDKSHKPEKELFVEKSFGGRNGKGRKSLLVVLSVSAMCLLAGSAFYFTRTGKGNDGPLYGNALDESSSDDFI 80 ITSLLKSPGGKKFIVSKLQELIASYDEDVNSAKASPSKEGPTGAHSTSVATVSRQKQGNLKVPKKIEINFADSRFLMINL 160 EKVNAFYLFMKEHGKKYKTEEEMQQRYLAFTENLARINSHNSKANILYKKGTNQYSDISFEEFRKTMLTLRFDLKKKLAN 240 SPYVSNYDDVLKKYKPADAVVDNEKYDWREHNAVSEIKNQNLCGSCWAFGAVGAVESQYAIRKNQHVLISEQELVDCSDK 320 NFGCFGGLASLAFDDMIDLGYLCSESDYPYVGFKPRKCEIKKCKEKYTIKSYVKIPEEKYKEAIQFLGPLTLGLTVNDDF 400 YDYKEGIFSSECTEEPNHEVMIVGYGVEEMFNSESNASEKHYYYIIKNSWGENWGEKGFMRIETDELGLQKTNNMTEAYV 480 PLLD 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_091405 11 MEYSNDK|SH 0.073 . PVX_091405 14 SNDKSHK|PE 0.069 . PVX_091405 17 KSHKPEK|EL 0.075 . PVX_091405 23 KELFVEK|SF 0.081 . PVX_091405 28 EKSFGGR|NG 0.075 . PVX_091405 31 FGGRNGK|GR 0.103 . PVX_091405 33 GRNGKGR|KS 0.119 . PVX_091405 34 RNGKGRK|SL 0.133 . PVX_091405 57 SAFYFTR|TG 0.082 . PVX_091405 60 YFTRTGK|GN 0.124 . PVX_091405 86 IITSLLK|SP 0.070 . PVX_091405 91 LKSPGGK|KF 0.071 . PVX_091405 92 KSPGGKK|FI 0.101 . PVX_091405 97 KKFIVSK|LQ 0.062 . PVX_091405 113 EDVNSAK|AS 0.069 . PVX_091405 118 AKASPSK|EG 0.068 . PVX_091405 134 SVATVSR|QK 0.101 . PVX_091405 136 ATVSRQK|QG 0.056 . PVX_091405 141 QKQGNLK|VP 0.064 . PVX_091405 144 GNLKVPK|KI 0.080 . PVX_091405 145 NLKVPKK|IE 0.087 . PVX_091405 154 INFADSR|FL 0.100 . PVX_091405 162 LMINLEK|VN 0.061 . PVX_091405 171 AFYLFMK|EH 0.077 . PVX_091405 175 FMKEHGK|KY 0.071 . PVX_091405 176 MKEHGKK|YK 0.153 . PVX_091405 178 EHGKKYK|TE 0.073 . PVX_091405 186 EEEMQQR|YL 0.090 . PVX_091405 196 FTENLAR|IN 0.080 . PVX_091405 203 INSHNSK|AN 0.074 . PVX_091405 209 KANILYK|KG 0.066 . PVX_091405 210 ANILYKK|GT 0.123 . PVX_091405 224 ISFEEFR|KT 0.082 . PVX_091405 225 SFEEFRK|TM 0.068 . PVX_091405 231 KTMLTLR|FD 0.078 . PVX_091405 235 TLRFDLK|KK 0.060 . PVX_091405 236 LRFDLKK|KL 0.098 . PVX_091405 237 RFDLKKK|LA 0.086 . PVX_091405 252 NYDDVLK|KY 0.059 . PVX_091405 253 YDDVLKK|YK 0.082 . PVX_091405 255 DVLKKYK|PA 0.083 . PVX_091405 265 AVVDNEK|YD 0.062 . PVX_091405 269 NEKYDWR|EH 0.082 . PVX_091405 278 NAVSEIK|NQ 0.061 . PVX_091405 302 ESQYAIR|KN 0.101 . PVX_091405 303 SQYAIRK|NQ 0.079 . PVX_091405 320 LVDCSDK|NF 0.061 . PVX_091405 354 YPYVGFK|PR 0.059 . PVX_091405 356 YVGFKPR|KC 0.104 . PVX_091405 357 VGFKPRK|CE 0.081 . PVX_091405 361 PRKCEIK|KC 0.067 . PVX_091405 362 RKCEIKK|CK 0.114 . PVX_091405 364 CEIKKCK|EK 0.073 . PVX_091405 366 IKKCKEK|YT 0.080 . PVX_091405 370 KEKYTIK|SY 0.079 . PVX_091405 374 TIKSYVK|IP 0.061 . PVX_091405 379 VKIPEEK|YK 0.077 . PVX_091405 381 IPEEKYK|EA 0.091 . PVX_091405 404 DDFYDYK|EG 0.058 . PVX_091405 440 ESNASEK|HY 0.078 . PVX_091405 447 HYYYIIK|NS 0.068 . PVX_091405 457 GENWGEK|GF 0.086 . PVX_091405 461 GEKGFMR|IE 0.110 . PVX_091405 471 DELGLQK|TN 0.057 . ____________________________^_________________

  • Fasta :-

    >PVX_091405 ATGGAATATCACATGGAGTACTCGAACGACAAGTCGCACAAGCCGGAGAAGGAACTGTTC GTGGAGAAATCGTTCGGCGGCAGAAATGGCAAGGGGAGAAAGAGCCTCCTCGTGGTTCTG TCCGTGTCGGCCATGTGCCTCCTAGCAGGATCCGCTTTCTACTTTACCCGCACGGGGAAG GGGAATGATGGCCCCCTGTACGGGAACGCACTTGACGAGAGCAGCAGCGATGATTTCATC ATCACCTCTCTGTTGAAAAGCCCCGGGGGGAAGAAATTCATCGTGTCGAAATTGCAAGAG TTGATAGCTTCGTACGATGAGGATGTCAACTCGGCTAAAGCTTCCCCTTCGAAGGAGGGA CCAACTGGAGCGCATAGCACATCCGTTGCTACGGTCAGCAGACAGAAGCAGGGAAATTTG AAAGTGCCCAAAAAAATTGAAATCAACTTTGCAGACTCCAGATTTTTGATGATCAACTTG GAGAAGGTCAACGCGTTCTACCTCTTCATGAAGGAGCACGGGAAGAAGTACAAGACGGAA GAGGAGATGCAGCAGAGGTACCTCGCCTTTACGGAAAACTTGGCAAGGATAAACTCGCAC AACAGTAAGGCAAATATTCTCTACAAGAAGGGCACAAACCAGTACAGTGACATAAGCTTT GAGGAGTTCAGAAAGACCATGCTAACGTTGCGATTTGACTTGAAGAAAAAACTAGCCAAT TCACCTTACGTGAGTAACTACGATGATGTGTTAAAGAAATACAAACCCGCAGATGCCGTG GTAGACAATGAGAAATATGACTGGAGGGAACACAACGCAGTGAGCGAAATAAAGAATCAA AACTTATGTGGCTCCTGTTGGGCCTTTGGAGCTGTAGGAGCTGTAGAGTCCCAATACGCC ATCCGAAAAAATCAACACGTATTGATAAGTGAACAAGAATTGGTTGACTGCTCTGATAAA AACTTTGGCTGCTTTGGTGGTTTAGCCTCCCTTGCATTCGACGACATGATTGACTTGGGG TACCTCTGCTCGGAGAGTGACTACCCCTACGTTGGATTCAAACCACGCAAATGTGAAATT AAAAAGTGCAAGGAAAAATATACCATCAAAAGTTATGTTAAAATTCCAGAGGAGAAATAT AAAGAGGCTATTCAGTTCCTTGGCCCTCTCACCTTAGGACTCACTGTGAATGATGATTTT TACGATTACAAGGAGGGCATCTTCTCTTCCGAATGTACAGAAGAACCCAACCATGAAGTC ATGATCGTGGGTTATGGTGTGGAGGAAATGTTTAACAGCGAATCCAATGCTAGTGAGAAA CACTACTACTACATTATTAAGAACTCCTGGGGGGAGAACTGGGGTGAAAAGGGATTCATG AGAATTGAGACCGACGAGTTGGGTTTGCAGAAGACCAACAACATGACCGAGGCGTACGTC CCCCTGCTTGACTAG
  • Download Fasta

  • Fasta :-

    MEYHMEYSNDKSHKPEKELFVEKSFGGRNGKGRKSLLVVLSVSAMCLLAGSAFYFTRTGK GNDGPLYGNALDESSSDDFIITSLLKSPGGKKFIVSKLQELIASYDEDVNSAKASPSKEG PTGAHSTSVATVSRQKQGNLKVPKKIEINFADSRFLMINLEKVNAFYLFMKEHGKKYKTE EEMQQRYLAFTENLARINSHNSKANILYKKGTNQYSDISFEEFRKTMLTLRFDLKKKLAN SPYVSNYDDVLKKYKPADAVVDNEKYDWREHNAVSEIKNQNLCGSCWAFGAVGAVESQYA IRKNQHVLISEQELVDCSDKNFGCFGGLASLAFDDMIDLGYLCSESDYPYVGFKPRKCEI KKCKEKYTIKSYVKIPEEKYKEAIQFLGPLTLGLTVNDDFYDYKEGIFSSECTEEPNHEV MIVGYGVEEMFNSESNASEKHYYYIIKNSWGENWGEKGFMRIETDELGLQKTNNMTEAYV PLLD

  • title: active site
  • coordinates: Q280,C286,H418,N448
IDSitePositionGscoreIscore
PVX_091405T1220.5270.293
IDSitePositionGscoreIscore
PVX_091405T1220.5270.293
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_091405219 SYSDISFEEF0.993unspPVX_091405219 SYSDISFEEF0.993unspPVX_091405219 SYSDISFEEF0.993unspPVX_09140512 SSNDKSHKPE0.992unspPVX_09140587 SSLLKSPGGK0.991unsp
PVX_091405      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India