PVX_091410 | vivapain-3

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_091410OTHER0.9998350.0001030.000062
No Results

  • Fasta :-

    >PVX_091410 MDYHMQYNAQDPINGERKGFVGQGYIDKAILKKKKNCLILLSVSAICIFVCSAFYFTRPA KRDGGVTYKIADKVDDDYIINFLLKSKNGKKFIASKVQELISTYDVKKENLPAQHGGTYK RFAKRDQCTRNNCSVSPYGKNAAQVEVVAQVNLVNPLVDTKFLMANLETVNSFYLFMKEH GKEYSTADEMQQRYLSFAENLAKIKAHNSRENVLYRKGMNRFGDLSFEEIKKKYLTLKSF DLKSDGIKSPRVSDYDDIIHKYKPKDGTFDYVKHDWREFNAVTPVKDQKNCGACWAFSTV GVVESQYAIRKKELVSLSEQEMVDCSFKNYGCDGGNIPIAFEDLLDLGGICKEKEYPYVD VTPELCDIDRCKNKYKITTYVEIPQLRFKEAIKFLGPISVSICANDDFVYYEGGLFDGSC GFSPNHAVILVGYGMEEMYDAMSRKNEKRYYFWLKNSWGEKWGEKGYMKIQTDEYGLMKT CSLGAQAFVALIDEV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_091410.fa Sequence name : PVX_091410 Sequence length : 495 VALUES OF COMPUTED PARAMETERS Coef20 : 2.637 CoefTot : 0.000 ChDiff : 5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.312 2.653 0.720 0.787 MesoH : -0.758 0.293 -0.374 0.217 MuHd_075 : 26.485 10.739 4.424 3.253 MuHd_095 : 23.366 15.251 5.419 4.530 MuHd_100 : 21.976 14.294 5.438 4.610 MuHd_105 : 15.899 11.268 5.408 3.924 Hmax_075 : 0.583 -2.100 -3.620 0.875 Hmax_095 : -4.113 -1.487 -4.865 1.312 Hmax_100 : -3.800 1.500 -3.686 1.780 Hmax_105 : -4.800 -3.400 -4.043 0.820 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9944 0.0056 DFMC : 0.9956 0.0044
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 495 PVX_091410 MDYHMQYNAQDPINGERKGFVGQGYIDKAILKKKKNCLILLSVSAICIFVCSAFYFTRPAKRDGGVTYKIADKVDDDYII 80 NFLLKSKNGKKFIASKVQELISTYDVKKENLPAQHGGTYKRFAKRDQCTRNNCSVSPYGKNAAQVEVVAQVNLVNPLVDT 160 KFLMANLETVNSFYLFMKEHGKEYSTADEMQQRYLSFAENLAKIKAHNSRENVLYRKGMNRFGDLSFEEIKKKYLTLKSF 240 DLKSDGIKSPRVSDYDDIIHKYKPKDGTFDYVKHDWREFNAVTPVKDQKNCGACWAFSTVGVVESQYAIRKKELVSLSEQ 320 EMVDCSFKNYGCDGGNIPIAFEDLLDLGGICKEKEYPYVDVTPELCDIDRCKNKYKITTYVEIPQLRFKEAIKFLGPISV 400 SICANDDFVYYEGGLFDGSCGFSPNHAVILVGYGMEEMYDAMSRKNEKRYYFWLKNSWGEKWGEKGYMKIQTDEYGLMKT 480 CSLGAQAFVALIDEV 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_091410 17 DPINGER|KG 0.087 . PVX_091410 18 PINGERK|GF 0.099 . PVX_091410 28 GQGYIDK|AI 0.065 . PVX_091410 32 IDKAILK|KK 0.058 . PVX_091410 33 DKAILKK|KK 0.082 . PVX_091410 34 KAILKKK|KN 0.113 . PVX_091410 35 AILKKKK|NC 0.092 . PVX_091410 58 SAFYFTR|PA 0.106 . PVX_091410 61 YFTRPAK|RD 0.126 . PVX_091410 62 FTRPAKR|DG 0.239 . PVX_091410 69 DGGVTYK|IA 0.082 . PVX_091410 73 TYKIADK|VD 0.062 . PVX_091410 85 IINFLLK|SK 0.081 . PVX_091410 87 NFLLKSK|NG 0.056 . PVX_091410 90 LKSKNGK|KF 0.087 . PVX_091410 91 KSKNGKK|FI 0.113 . PVX_091410 96 KKFIASK|VQ 0.059 . PVX_091410 107 ISTYDVK|KE 0.056 . PVX_091410 108 STYDVKK|EN 0.114 . PVX_091410 120 QHGGTYK|RF 0.059 . PVX_091410 121 HGGTYKR|FA 0.268 . PVX_091410 124 TYKRFAK|RD 0.117 . PVX_091410 125 YKRFAKR|DQ 0.263 . PVX_091410 130 KRDQCTR|NN 0.084 . PVX_091410 140 SVSPYGK|NA 0.090 . PVX_091410 161 NPLVDTK|FL 0.075 . PVX_091410 178 SFYLFMK|EH 0.075 . PVX_091410 182 FMKEHGK|EY 0.076 . PVX_091410 193 ADEMQQR|YL 0.132 . PVX_091410 203 FAENLAK|IK 0.059 . PVX_091410 205 ENLAKIK|AH 0.062 . PVX_091410 210 IKAHNSR|EN 0.102 . PVX_091410 216 RENVLYR|KG 0.095 . PVX_091410 217 ENVLYRK|GM 0.075 . PVX_091410 221 YRKGMNR|FG 0.107 . PVX_091410 231 LSFEEIK|KK 0.060 . PVX_091410 232 SFEEIKK|KY 0.071 . PVX_091410 233 FEEIKKK|YL 0.102 . PVX_091410 238 KKYLTLK|SF 0.087 . PVX_091410 243 LKSFDLK|SD 0.098 . PVX_091410 248 LKSDGIK|SP 0.079 . PVX_091410 251 DGIKSPR|VS 0.082 . PVX_091410 261 YDDIIHK|YK 0.058 . PVX_091410 263 DIIHKYK|PK 0.076 . PVX_091410 265 IHKYKPK|DG 0.070 . PVX_091410 273 GTFDYVK|HD 0.063 . PVX_091410 277 YVKHDWR|EF 0.091 . PVX_091410 286 NAVTPVK|DQ 0.070 . PVX_091410 289 TPVKDQK|NC 0.076 . PVX_091410 310 ESQYAIR|KK 0.083 . PVX_091410 311 SQYAIRK|KE 0.073 . PVX_091410 312 QYAIRKK|EL 0.094 . PVX_091410 328 MVDCSFK|NY 0.066 . PVX_091410 352 DLGGICK|EK 0.058 . PVX_091410 354 GGICKEK|EY 0.065 . PVX_091410 370 ELCDIDR|CK 0.083 . PVX_091410 372 CDIDRCK|NK 0.068 . PVX_091410 374 IDRCKNK|YK 0.076 . PVX_091410 376 RCKNKYK|IT 0.079 . PVX_091410 387 VEIPQLR|FK 0.109 . PVX_091410 389 IPQLRFK|EA 0.078 . PVX_091410 393 RFKEAIK|FL 0.080 . PVX_091410 444 MYDAMSR|KN 0.077 . PVX_091410 445 YDAMSRK|NE 0.086 . PVX_091410 448 MSRKNEK|RY 0.066 . PVX_091410 449 SRKNEKR|YY 0.290 . PVX_091410 455 RYYFWLK|NS 0.069 . PVX_091410 461 KNSWGEK|WG 0.079 . PVX_091410 465 GEKWGEK|GY 0.078 . PVX_091410 469 GEKGYMK|IQ 0.066 . PVX_091410 479 DEYGLMK|TC 0.063 . ____________________________^_________________

  • Fasta :-

    >PVX_091410 ATGGACTACCACATGCAGTACAACGCCCAGGACCCCATAAACGGGGAAAGGAAGGGGTTC GTGGGGCAGGGCTACATTGACAAGGCCATTTTGAAGAAAAAGAAAAACTGCCTGATCCTC CTGTCCGTCTCGGCCATCTGCATATTCGTGTGCTCGGCATTTTACTTCACGAGACCCGCA AAAAGGGATGGAGGGGTTACCTACAAAATTGCAGACAAAGTGGACGACGATTATATTATT AATTTTCTGCTAAAGAGCAAAAATGGAAAAAAGTTCATCGCTTCCAAAGTGCAGGAATTA ATATCAACGTATGACGTGAAGAAGGAAAACCTCCCCGCTCAGCATGGAGGCACCTATAAG CGCTTTGCAAAGAGAGACCAATGCACCAGAAATAATTGCAGCGTTAGTCCGTATGGGAAA AATGCAGCTCAGGTGGAGGTGGTAGCCCAGGTGAATCTCGTAAACCCTCTGGTTGACACC AAATTTTTGATGGCCAATTTGGAGACGGTGAACTCGTTCTACCTCTTCATGAAGGAGCAC GGGAAGGAGTACAGCACAGCGGATGAAATGCAACAGAGGTACCTCTCCTTTGCGGAAAAC TTGGCAAAGATAAAGGCACACAACAGTAGGGAGAATGTCCTTTACAGAAAAGGAATGAAT CGCTTTGGAGATCTCTCCTTTGAAGAAATAAAGAAGAAATATTTGACGCTCAAAAGTTTT GACCTCAAATCAGATGGTATTAAATCACCAAGAGTTAGCGATTACGACGATATAATTCAT AAGTACAAACCGAAGGATGGCACTTTCGATTACGTGAAGCATGACTGGAGAGAGTTTAAC GCGGTAACCCCTGTGAAGGACCAAAAGAATTGTGGTGCCTGCTGGGCCTTTAGCACAGTG GGAGTTGTAGAGTCCCAATACGCAATCAGAAAAAAAGAGTTAGTCTCCCTAAGTGAGCAA GAAATGGTAGACTGTTCTTTTAAAAACTATGGCTGTGATGGAGGCAACATCCCAATAGCC TTTGAAGACCTACTCGACTTGGGAGGCATCTGCAAAGAAAAGGAATACCCCTATGTAGAT GTCACTCCAGAACTCTGCGACATTGATAGGTGCAAAAATAAATATAAAATTACCACCTAT GTGGAAATTCCGCAACTTCGTTTTAAGGAGGCCATCAAATTTTTGGGACCCATCAGTGTG AGCATTTGTGCAAATGACGATTTCGTGTACTACGAGGGAGGCCTGTTTGATGGCTCCTGT GGATTCTCTCCCAACCATGCCGTCATCCTTGTTGGCTACGGAATGGAAGAAATGTATGAT GCCATGAGCCGAAAGAATGAAAAGCGCTACTACTTTTGGCTGAAGAATTCTTGGGGTGAG AAATGGGGAGAAAAGGGATACATGAAGATTCAAACGGATGAATACGGGTTGATGAAGACT TGCTCGCTGGGTGCTCAGGCATTCGTGGCTTTGATTGACGAAGTTTGA
  • Download Fasta

  • Fasta :-

    MDYHMQYNAQDPINGERKGFVGQGYIDKAILKKKKNCLILLSVSAICIFVCSAFYFTRPA KRDGGVTYKIADKVDDDYIINFLLKSKNGKKFIASKVQELISTYDVKKENLPAQHGGTYK RFAKRDQCTRNNCSVSPYGKNAAQVEVVAQVNLVNPLVDTKFLMANLETVNSFYLFMKEH GKEYSTADEMQQRYLSFAENLAKIKAHNSRENVLYRKGMNRFGDLSFEEIKKKYLTLKSF DLKSDGIKSPRVSDYDDIIHKYKPKDGTFDYVKHDWREFNAVTPVKDQKNCGACWAFSTV GVVESQYAIRKKELVSLSEQEMVDCSFKNYGCDGGNIPIAFEDLLDLGGICKEKEYPYVD VTPELCDIDRCKNKYKITTYVEIPQLRFKEAIKFLGPISVSICANDDFVYYEGGLFDGSC GFSPNHAVILVGYGMEEMYDAMSRKNEKRYYFWLKNSWGEKWGEKGYMKIQTDEYGLMKT CSLGAQAFVALIDEV

  • title: active site
  • coordinates: Q288,C294,H426,N456
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_091410253 SSPRVSDYDD0.998unspPVX_091410253 SSPRVSDYDD0.998unspPVX_091410253 SSPRVSDYDD0.998unspPVX_091410316 SKELVSLSEQ0.996unspPVX_091410443 SYDAMSRKNE0.997unspPVX_091410226 SFGDLSFEEI0.994unspPVX_091410249 SDGIKSPRVS0.993unsp
PVX_091410      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India