PVX_091440 | hypothetical protein, conserved

_IDPredictionOTHERSPmTPCS_Position
PVX_091440OTHER0.9992420.0007360.000023
No Results

  • Fasta :-

    >PVX_091440 MADITIGVLSLQGDFQPHINHFQKLEEPGLKVVEVRNKEDLSTCDGLVIPGGESTTLRKC FAYDNDALYNALKEFIHVKKKPVWGTCAGCILLSNNVENNETQSQAYGKNFSLGGLDITI SRNFYGSQNDSFICSLNVHSESSAFKKNLRGACIRAPYIREIHSDQVHTLATFSHETVGP NIIAAVEQNNCLGMVFHPELMPHSSFHQYFYEKVKNSKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_091440.fa Sequence name : PVX_091440 Sequence length : 219 VALUES OF COMPUTED PARAMETERS Coef20 : 3.315 CoefTot : 0.141 ChDiff : -2 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.618 0.882 0.010 0.445 MesoH : -0.783 -0.005 -0.459 0.121 MuHd_075 : 18.420 10.840 4.601 2.069 MuHd_095 : 16.908 8.521 3.519 1.599 MuHd_100 : 19.138 11.508 3.438 2.495 MuHd_105 : 16.753 11.529 2.072 2.829 Hmax_075 : 17.267 13.417 2.281 4.795 Hmax_095 : 11.812 10.200 1.316 3.980 Hmax_100 : 13.600 13.600 0.981 5.520 Hmax_105 : 11.200 10.300 0.277 4.043 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9634 0.0366 DFMC : 0.9634 0.0366
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 219 PVX_091440 MADITIGVLSLQGDFQPHINHFQKLEEPGLKVVEVRNKEDLSTCDGLVIPGGESTTLRKCFAYDNDALYNALKEFIHVKK 80 KPVWGTCAGCILLSNNVENNETQSQAYGKNFSLGGLDITISRNFYGSQNDSFICSLNVHSESSAFKKNLRGACIRAPYIR 160 EIHSDQVHTLATFSHETVGPNIIAAVEQNNCLGMVFHPELMPHSSFHQYFYEKVKNSKK 240 ................................................................................ 80 ................................................................................ 160 ........................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_091440 24 HINHFQK|LE 0.091 . PVX_091440 31 LEEPGLK|VV 0.065 . PVX_091440 36 LKVVEVR|NK 0.101 . PVX_091440 38 VVEVRNK|ED 0.055 . PVX_091440 58 GESTTLR|KC 0.112 . PVX_091440 59 ESTTLRK|CF 0.068 . PVX_091440 73 ALYNALK|EF 0.061 . PVX_091440 79 KEFIHVK|KK 0.064 . PVX_091440 80 EFIHVKK|KP 0.091 . PVX_091440 81 FIHVKKK|PV 0.168 . PVX_091440 109 QSQAYGK|NF 0.079 . PVX_091440 122 LDITISR|NF 0.084 . PVX_091440 146 SESSAFK|KN 0.067 . PVX_091440 147 ESSAFKK|NL 0.144 . PVX_091440 150 AFKKNLR|GA 0.096 . PVX_091440 155 LRGACIR|AP 0.099 . PVX_091440 160 IRAPYIR|EI 0.134 . PVX_091440 213 HQYFYEK|VK 0.058 . PVX_091440 215 YFYEKVK|NS 0.064 . PVX_091440 218 EKVKNSK|K- 0.064 . PVX_091440 219 KVKNSKK|-- 0.103 . ____________________________^_________________

  • Fasta :-

    >PVX_091440 ATGGCGGACATCACAATCGGCGTTTTGTCTCTCCAGGGGGACTTCCAGCCGCATATAAAT CATTTCCAAAAGTTGGAAGAGCCAGGGCTGAAGGTTGTAGAAGTTCGAAATAAAGAGGAC CTGAGCACCTGTGACGGTCTGGTGATACCCGGCGGGGAGTCCACCACCCTGAGGAAGTGT TTCGCCTACGACAACGACGCCTTATACAACGCCTTAAAGGAGTTCATCCACGTCAAGAAG AAGCCCGTATGGGGGACCTGTGCAGGCTGCATCCTCCTCTCGAACAATGTGGAGAACAAC GAGACGCAGAGCCAGGCTTACGGGAAAAATTTTTCCCTGGGGGGGCTCGACATCACCATA AGCAGGAACTTCTACGGTTCGCAGAACGACAGCTTCATATGCTCGCTGAATGTGCACTCA GAGAGCAGTGCCTTCAAGAAGAATTTGCGCGGGGCCTGCATACGAGCCCCGTACATACGG GAAATTCACTCGGACCAGGTTCACACACTCGCGACATTTTCGCACGAAACCGTCGGCCCT AATATCATAGCCGCCGTCGAACAGAACAACTGCTTGGGGATGGTTTTCCACCCAGAGCTA ATGCCGCACAGTTCCTTTCATCAGTACTTTTACGAGAAGGTGAAAAATAGTAAAAAGTGA
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  • Fasta :-

    MADITIGVLSLQGDFQPHINHFQKLEEPGLKVVEVRNKEDLSTCDGLVIPGGESTTLRKC FAYDNDALYNALKEFIHVKKKPVWGTCAGCILLSNNVENNETQSQAYGKNFSLGGLDITI SRNFYGSQNDSFICSLNVHSESSAFKKNLRGACIRAPYIREIHSDQVHTLATFSHETVGP NIIAAVEQNNCLGMVFHPELMPHSSFHQYFYEKVKNSKK

  • title: catalytic triad
  • coordinates: C87,H197,E199
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_09144042 SKEDLSTCDG0.994unspPVX_091440127 SNFYGSQNDS0.993unsp
PVX_091440      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India