PVX_091485 | ubiquitin C-terminal hydrolase, family 1, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_091485OTHER0.9999920.0000050.000003
No Results

  • Fasta :-

    >PVX_091485 MQRSSNEGLSEWCLIESNPCIFNDMLSRMGAKHLSVEDVYDLEFFDDYIYNRDVVSVEHV LSIELYKTEKEKEKEREEREEQKEREEREEQKEQNAADGSTGGGAPPKREMYRNTAETDE KYYRLIRNENSIFGIIFLFNIGKSYKRNKFVEHSVPENLFFAKQVIPNACATQAILSIVL NIGVELNEEIKNIKSFSNNFDSSMKGLTLSNCNFLRNIHNTYKPPIYIEKENLHDEKGKN NDSFHFVSYIQFGGSVYMLDGLQEGPVLIGQTGGADGRRSWVDLAREHIKKEIDEICGVS GGSGVSGGVGGSSGGRGGSGGGDGRFNILIVVKDKEYLLKEFYKIHRILYKRLFTKLRSL GVKEELLLDPVHDKINDQLSEEISAEMNGQVSGQANGQANGQANVQANGQVIEEKFNYAN IPTVEELPDNIGELLTTFHKSQFEINYLQALLQEQKQLKRSSKKELAFKYFNFYPFVMSS LKLMAKHKFLKEAYQKQKQKRRRAIA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_091485.fa Sequence name : PVX_091485 Sequence length : 506 VALUES OF COMPUTED PARAMETERS Coef20 : 3.718 CoefTot : 0.070 ChDiff : -5 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.371 1.588 0.338 0.536 MesoH : -0.751 0.293 -0.382 0.203 MuHd_075 : 33.759 22.457 11.232 5.324 MuHd_095 : 29.885 11.239 7.204 5.115 MuHd_100 : 23.506 9.199 4.519 5.415 MuHd_105 : 18.947 7.042 1.950 5.061 Hmax_075 : 15.517 14.467 2.467 4.527 Hmax_095 : 3.588 1.575 -0.726 2.230 Hmax_100 : 4.600 4.600 -1.546 3.510 Hmax_105 : 8.700 4.600 -0.918 3.400 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8356 0.1644 DFMC : 0.8503 0.1497
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 506 PVX_091485 MQRSSNEGLSEWCLIESNPCIFNDMLSRMGAKHLSVEDVYDLEFFDDYIYNRDVVSVEHVLSIELYKTEKEKEKEREERE 80 EQKEREEREEQKEQNAADGSTGGGAPPKREMYRNTAETDEKYYRLIRNENSIFGIIFLFNIGKSYKRNKFVEHSVPENLF 160 FAKQVIPNACATQAILSIVLNIGVELNEEIKNIKSFSNNFDSSMKGLTLSNCNFLRNIHNTYKPPIYIEKENLHDEKGKN 240 NDSFHFVSYIQFGGSVYMLDGLQEGPVLIGQTGGADGRRSWVDLAREHIKKEIDEICGVSGGSGVSGGVGGSSGGRGGSG 320 GGDGRFNILIVVKDKEYLLKEFYKIHRILYKRLFTKLRSLGVKEELLLDPVHDKINDQLSEEISAEMNGQVSGQANGQAN 400 GQANVQANGQVIEEKFNYANIPTVEELPDNIGELLTTFHKSQFEINYLQALLQEQKQLKRSSKKELAFKYFNFYPFVMSS 480 LKLMAKHKFLKEAYQKQKQKRRRAIA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_091485 3 ----MQR|SS 0.158 . PVX_091485 28 FNDMLSR|MG 0.082 . PVX_091485 32 LSRMGAK|HL 0.077 . PVX_091485 52 DDYIYNR|DV 0.164 . PVX_091485 67 LSIELYK|TE 0.067 . PVX_091485 70 ELYKTEK|EK 0.066 . PVX_091485 72 YKTEKEK|EK 0.076 . PVX_091485 74 TEKEKEK|ER 0.076 . PVX_091485 76 KEKEKER|EE 0.086 . PVX_091485 79 EKEREER|EE 0.233 . PVX_091485 83 EEREEQK|ER 0.069 . PVX_091485 85 REEQKER|EE 0.093 . PVX_091485 88 QKEREER|EE 0.245 . PVX_091485 92 EEREEQK|EQ 0.069 . PVX_091485 108 GGGAPPK|RE 0.060 . PVX_091485 109 GGAPPKR|EM 0.181 . PVX_091485 113 PKREMYR|NT 0.097 . PVX_091485 121 TAETDEK|YY 0.066 . PVX_091485 124 TDEKYYR|LI 0.095 . PVX_091485 127 KYYRLIR|NE 0.175 . PVX_091485 143 FLFNIGK|SY 0.072 . PVX_091485 146 NIGKSYK|RN 0.071 . PVX_091485 147 IGKSYKR|NK 0.127 . PVX_091485 149 KSYKRNK|FV 0.140 . PVX_091485 163 ENLFFAK|QV 0.086 . PVX_091485 191 ELNEEIK|NI 0.060 . PVX_091485 194 EEIKNIK|SF 0.085 . PVX_091485 205 NFDSSMK|GL 0.062 . PVX_091485 216 SNCNFLR|NI 0.104 . PVX_091485 223 NIHNTYK|PP 0.068 . PVX_091485 230 PPIYIEK|EN 0.065 . PVX_091485 237 ENLHDEK|GK 0.063 . PVX_091485 239 LHDEKGK|NN 0.070 . PVX_091485 278 TGGADGR|RS 0.077 . PVX_091485 279 GGADGRR|SW 0.225 . PVX_091485 286 SWVDLAR|EH 0.111 . PVX_091485 290 LAREHIK|KE 0.076 . PVX_091485 291 AREHIKK|EI 0.145 . PVX_091485 316 GGSSGGR|GG 0.135 . PVX_091485 325 SGGGDGR|FN 0.084 . PVX_091485 333 NILIVVK|DK 0.072 . PVX_091485 335 LIVVKDK|EY 0.063 . PVX_091485 340 DKEYLLK|EF 0.066 . PVX_091485 344 LLKEFYK|IH 0.063 . PVX_091485 347 EFYKIHR|IL 0.097 . PVX_091485 351 IHRILYK|RL 0.082 . PVX_091485 352 HRILYKR|LF 0.168 . PVX_091485 356 YKRLFTK|LR 0.069 . PVX_091485 358 RLFTKLR|SL 0.214 . PVX_091485 363 LRSLGVK|EE 0.061 . PVX_091485 374 LDPVHDK|IN 0.065 . PVX_091485 415 GQVIEEK|FN 0.085 . PVX_091485 440 LLTTFHK|SQ 0.070 . PVX_091485 456 ALLQEQK|QL 0.057 . PVX_091485 459 QEQKQLK|RS 0.076 . PVX_091485 460 EQKQLKR|SS 0.279 . PVX_091485 463 QLKRSSK|KE 0.099 . PVX_091485 464 LKRSSKK|EL 0.131 . PVX_091485 469 KKELAFK|YF 0.068 . PVX_091485 482 FVMSSLK|LM 0.054 . PVX_091485 486 SLKLMAK|HK 0.069 . PVX_091485 488 KLMAKHK|FL 0.079 . PVX_091485 491 AKHKFLK|EA 0.101 . PVX_091485 496 LKEAYQK|QK 0.064 . PVX_091485 498 EAYQKQK|QK 0.063 . PVX_091485 500 YQKQKQK|RR 0.064 . PVX_091485 501 QKQKQKR|RR 0.204 . PVX_091485 502 KQKQKRR|RA 0.211 . PVX_091485 503 QKQKRRR|AI 0.239 . ____________________________^_________________

  • Fasta :-

    >PVX_091485 CATTTTGATGTTCGTGTACGTTCTTCCATTACACGCCGTGCATGTGCAGTGACTCCTCCT TTTGCCAAAGCATCTTTGACGCTGCGACTGTTTTGTTTCTGCTAGGGGATTACTTGGTGG AATTAGAAAGGTATTCCCTAATTTGGCTCATCCTTCCCGTTAAGGCAACTCGCCTCTGTG CGTTTGTGCGCAACTCGGACGGCGTCGTAAGCGCATCGCGTGGCCCCCTGGTGAGGCAGC AGTTCGGGAGAGCCACCCAAGGGTGCAGCTATCGGAAGGGGGAGAAGAAAGGAGCAAACG AGAAAGCTAAAGAGGCGCACCGGATAGGAGAGCGCCATCACACCAGAGAAGCGAACGTGA ATACGGTGTAGTAGGTCTCCGCTCCCCACCTCATCTGACGGCTTTTCATCTGACGGCGTT TCATCTGACGGCTTTTCATCTGACGGCTTTTCACCTGACCGCTTTTCATCTGACCGCTTC TCATCTGACCGCTTCTCATCTGACCGCTTCTCATCTGACCGCTTCTCATCTGATTGCTCC CCCCCCGCGCACGATGCAACGAAGCAGCAACGAGGGCCTGAGCGAATGGTGCCTGATCGA GAGCAACCCCTGCATCTTCAACGACATGCTGAGCCGGATGGGCGCGAAGCACCTCTCCGT GGAGGACGTGTACGATTTGGAGTTCTTCGACGACTACATCTATAACAGGGATGTGGTCAG CGTGGAGCACGTCCTCAGCATCGAGCTGTACAAAACGGAGAAGGAGAAGGAGAAGGAGCG GGAGGAGCGGGAGGAGCAGAAGGAGCGGGAGGAGCGGGAGGAGCAGAAGGAGCAGAATGC CGCTGATGGAAGCACCGGGGGAGGGGCGCCCCCGAAAAGGGAGATGTACCGAAACACAGC CGAAACGGACGAAAAGTACTACCGGCTCATAAGAAACGAAAACAGCATTTTTGGAATTAT TTTCCTTTTTAACATCGGGAAGAGCTACAAGAGGAACAAGTTCGTGGAGCACAGTGTGCC AGAGAACCTCTTCTTTGCAAAGCAGGTGATCCCGAACGCATGTGCCACGCAAGCAATCCT GTCTATTGTCCTAAATATAGGGGTAGAACTGAACGAAGAAATAAAAAACATCAAATCGTT TAGCAATAACTTTGATAGCTCGATGAAGGGGCTCACCCTCTCCAACTGTAACTTCCTTCG AAACATCCACAATACGTATAAGCCTCCCATATATATAGAAAAGGAGAACCTGCATGACGA AAAGGGAAAGAACAACGACTCCTTCCACTTCGTTTCGTATATACAATTTGGCGGGAGTGT CTACATGCTGGACGGCCTGCAGGAGGGGCCCGTGCTCATCGGGCAGACCGGGGGCGCGGA CGGCCGCCGCAGTTGGGTCGACCTCGCCAGGGAGCACATCAAGAAGGAGATCGACGAGAT ATGCGGGGTTAGCGGTGGTAGCGGAGTTAGCGGCGGTGTGGGTGGAAGCAGCGGTGGCCG TGGCGGCAGCGGTGGGGGGGACGGGCGGTTCAACATCCTAATCGTGGTGAAGGACAAGGA GTATTTGCTCAAAGAGTTTTATAAAATCCACAGAATTTTGTATAAGAGACTCTTCACCAA GTTACGCAGCCTGGGGGTGAAGGAGGAATTATTACTGGACCCAGTACACGATAAAATAAA CGACCAACTGAGCGAAGAGATAAGCGCAGAAATGAACGGCCAAGTAAGCGGCCAAGCAAA CGGCCAAGCGAACGGCCAAGCAAACGTCCAAGCGAACGGCCAAGTAATCGAAGAAAAGTT TAACTACGCGAATATCCCCACCGTGGAGGAGCTCCCAGACAATATCGGAGAGCTGCTGAC CACTTTCCATAAGTCCCAATTTGAAATCAACTACCTGCAGGCCCTTTTGCAGGAGCAGAA GCAGTTGAAGCGCTCCTCGAAGAAGGAGCTGGCCTTCAAATATTTTAATTTCTACCCCTT CGTGATGTCCTCTTTGAAGCTCATGGCCAAGCACAAGTTCTTGAAGGAGGCCTACCAGAA GCAGAAGCAGAAGCGCAGGCGGGCCATCGCCTAG
  • Download Fasta

  • Fasta :-

    MQRSSNEGLSEWCLIESNPCIFNDMLSRMGAKHLSVEDVYDLEFFDDYIYNRDVVSVEHV LSIELYKTEKEKEKEREEREEQKEREEREEQKEQNAADGSTGGGAPPKREMYRNTAETDE KYYRLIRNENSIFGIIFLFNIGKSYKRNKFVEHSVPENLFFAKQVIPNACATQAILSIVL NIGVELNEEIKNIKSFSNNFDSSMKGLTLSNCNFLRNIHNTYKPPIYIEKENLHDEKGKN NDSFHFVSYIQFGGSVYMLDGLQEGPVLIGQTGGADGRRSWVDLAREHIKKEIDEICGVS GGSGVSGGVGGSSGGRGGSGGGDGRFNILIVVKDKEYLLKEFYKIHRILYKRLFTKLRSL GVKEELLLDPVHDKINDQLSEEISAEMNGQVSGQANGQANGQANVQANGQVIEEKFNYAN IPTVEELPDNIGELLTTFHKSQFEINYLQALLQEQKQLKRSSKKELAFKYFNFYPFVMSS LKLMAKHKFLKEAYQKQKQKRRRAIA

  • title: catalytic site
  • coordinates: Q164,C170,H245,D260
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_091485280 SDGRRSWVDL0.998unspPVX_091485280 SDGRRSWVDL0.998unspPVX_091485280 SDGRRSWVDL0.998unspPVX_091485461 SQLKRSSKKE0.992unspPVX_091485462 SLKRSSKKEL0.998unspPVX_09148535 SAKHLSVEDV0.992unspPVX_091485144 SNIGKSYKRN0.996unsp
PVX_091485      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India