PVX_092690 | hypothetical protein, conserved

UniProt_ID: A5K575

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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PVX_092690	OTHER	0.999996	0.000000	0.000004

No Results

Fasta :-
>PVX_092690 MDGGEKEARISYHEYKKRLKKLTEEIKKEKKKKTINKNKNSDNLTKLEEELSKLNAMYNL GNADEGSEMNHSEKKNDRDREASTYEDINDGVATTELYSYNAVSKKALRNIKRTQRKERE VERIEQSRSKIGDLEYEELVECLKRVNKTIYPIAPDGNCLYESILHQLRERVGGFKYNQE DLLNLLGEERFSLEGVNLRDYQKGGPFDFGIFAHFDPQDLSSDVLRFIAAVYILQNEEQF VHFVCADEGDEPAADTYFCYCEAILKGVYGSEIEINALSSILKKKITVYDVNMNISYGEE HETELFICIHHKLYALGKHYNSVVDM
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_092690.fa Sequence name : PVX_092690 Sequence length : 326 VALUES OF COMPUTED PARAMETERS Coef20 : 3.017 CoefTot : 0.000 ChDiff : -12 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.159 1.018 -0.073 0.402 MesoH : -0.894 0.314 -0.393 0.243 MuHd_075 : 10.954 8.595 3.787 2.429 MuHd_095 : 37.084 12.093 10.818 6.034 MuHd_100 : 29.241 10.892 9.132 4.800 MuHd_105 : 19.448 8.900 6.011 3.634 Hmax_075 : -12.367 -3.617 -5.642 -0.140 Hmax_095 : -3.600 -4.000 -2.746 1.180 Hmax_100 : -3.000 -3.600 -2.770 1.340 Hmax_105 : -19.500 -8.000 -6.628 -0.723 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9754 0.0246 DFMC : 0.9755 0.0245

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 326 PVX_092690 MDGGEKEARISYHEYKKRLKKLTEEIKKEKKKKTINKNKNSDNLTKLEEELSKLNAMYNLGNADEGSEMNHSEKKNDRDR 80 EASTYEDINDGVATTELYSYNAVSKKALRNIKRTQRKEREVERIEQSRSKIGDLEYEELVECLKRVNKTIYPIAPDGNCL 160 YESILHQLRERVGGFKYNQEDLLNLLGEERFSLEGVNLRDYQKGGPFDFGIFAHFDPQDLSSDVLRFIAAVYILQNEEQF 240 VHFVCADEGDEPAADTYFCYCEAILKGVYGSEIEINALSSILKKKITVYDVNMNISYGEEHETELFICIHHKLYALGKHY 320 NSVVDM 400 ................................................................................ 80 ......................................P......................................... 160 ................................................................................ 240 ................................................................................ 320 ...... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_092690 6 -MDGGEK|EA 0.059 . PVX_092690 9 GGEKEAR|IS 0.096 . PVX_092690 16 ISYHEYK|KR 0.071 . PVX_092690 17 SYHEYKK|RL 0.088 . PVX_092690 18 YHEYKKR|LK 0.149 . PVX_092690 20 EYKKRLK|KL 0.062 . PVX_092690 21 YKKRLKK|LT 0.346 . PVX_092690 27 KLTEEIK|KE 0.056 . PVX_092690 28 LTEEIKK|EK 0.081 . PVX_092690 30 EEIKKEK|KK 0.064 . PVX_092690 31 EIKKEKK|KK 0.088 . PVX_092690 32 IKKEKKK|KT 0.135 . PVX_092690 33 KKEKKKK|TI 0.167 . PVX_092690 37 KKKTINK|NK 0.065 . PVX_092690 39 KTINKNK|NS 0.068 . PVX_092690 46 NSDNLTK|LE 0.058 . PVX_092690 53 LEEELSK|LN 0.057 . PVX_092690 74 EMNHSEK|KN 0.072 . PVX_092690 75 MNHSEKK|ND 0.128 . PVX_092690 78 SEKKNDR|DR 0.125 . PVX_092690 80 KKNDRDR|EA 0.190 . PVX_092690 105 SYNAVSK|KA 0.069 . PVX_092690 106 YNAVSKK|AL 0.153 . PVX_092690 109 VSKKALR|NI 0.082 . PVX_092690 112 KALRNIK|RT 0.127 . PVX_092690 113 ALRNIKR|TQ 0.193 . PVX_092690 116 NIKRTQR|KE 0.225 . PVX_092690 117 IKRTQRK|ER 0.099 . PVX_092690 119 RTQRKER|EV 0.664 *ProP* PVX_092690 123 KEREVER|IE 0.074 . PVX_092690 128 ERIEQSR|SK 0.144 . PVX_092690 130 IEQSRSK|IG 0.062 . PVX_092690 144 ELVECLK|RV 0.059 . PVX_092690 145 LVECLKR|VN 0.146 . PVX_092690 148 CLKRVNK|TI 0.155 . PVX_092690 169 SILHQLR|ER 0.073 . PVX_092690 171 LHQLRER|VG 0.087 . PVX_092690 176 ERVGGFK|YN 0.068 . PVX_092690 190 NLLGEER|FS 0.075 . PVX_092690 199 LEGVNLR|DY 0.124 . PVX_092690 203 NLRDYQK|GG 0.060 . PVX_092690 226 LSSDVLR|FI 0.156 . PVX_092690 266 YCEAILK|GV 0.074 . PVX_092690 283 ALSSILK|KK 0.069 . PVX_092690 284 LSSILKK|KI 0.128 . PVX_092690 285 SSILKKK|IT 0.116 . PVX_092690 312 FICIHHK|LY 0.065 . PVX_092690 318 KLYALGK|HY 0.080 . ____________________________^_________________

Fasta :-
>PVX_092690 GTTACTCCCAAGGAGCTAATTCGGTTTGTTTACTCCCAACTGCTAACTCTGTTTTGTTAC CCCCAACTGCTAATTCGGTTTGTTTACTCCCCCTCTGTTAACATTTTAAGGCGCATGCCA ATACCCCCCAGCAGAAGAAAACCCATTTGTTCATCCCATAAATGTGTAGAGTAATATCTT GACTGTTTTTTTTTTTTTTTTTGTTTTTGTTTTTTTTTGTTTCCCGTTTGTGGATCGGTG GACGTTTCAGCGGTTGAGAAGTTCCTCAGTGGAAACCTTTCCCCGAGGCGAGAAAGCAAC TGGAAGGTTTCCCCGGTTGGAGGTTACCCACACTGACGGGAGTATTGCCCACCCTTAGTG CCACCATGGATGGGGGAGAGAAGGAAGCGCGCATCAGCTACCATGAGTACAAAAAAAGGC TGAAGAAACTCACGGAGGAAATAAAAAAGGAAAAGAAAAAAAAGACGATTAACAAAAATA AAAATAGCGACAATTTGACCAAACTGGAGGAGGAACTGAGCAAGCTGAACGCCATGTATA ACCTGGGCAATGCAGACGAAGGAAGCGAAATGAATCACTCGGAAAAGAAAAATGATCGTG ATAGAGAGGCAAGCACATATGAAGACATTAACGACGGTGTAGCCACCACGGAGCTATACT CATACAATGCAGTCTCGAAAAAGGCATTAAGAAATATAAAAAGGACACAGAGAAAAGAGA GGGAGGTTGAAAGGATTGAGCAGTCGAGAAGCAAAATAGGAGACCTTGAATATGAGGAAT TGGTTGAATGCTTAAAGAGAGTAAATAAAACCATCTATCCCATCGCTCCTGATGGGAACT GTCTGTACGAGTCGATTCTACACCAACTGAGAGAGAGAGTAGGCGGATTTAAATATAACC AAGAGGACCTTTTGAATCTCCTAGGGGAGGAAAGATTTTCACTGGAAGGTGTAAATTTGA GGGACTACCAAAAGGGGGGTCCCTTTGACTTTGGCATTTTCGCCCATTTTGACCCGCAGG ATTTGAGCAGTGACGTCCTGCGATTTATAGCGGCCGTTTATATTTTGCAGAACGAGGAGC AGTTTGTGCACTTTGTGTGTGCGGATGAGGGGGACGAGCCGGCTGCGGACACCTACTTCT GCTATTGTGAGGCCATTCTCAAGGGCGTTTACGGGAGCGAAATCGAAATCAATGCCCTCT CGAGCATCTTGAAGAAGAAAATTACCGTTTACGACGTAAATATGAACATTTCGTATGGAG AGGAGCATGAAACGGAGCTGTTCATATGCATCCACCATAAGCTGTATGCATTAGGGAAGC ACTACAATTCCGTCGTTGACATGTGA
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Fasta :-

MDGGEKEARISYHEYKKRLKKLTEEIKKEKKKKTINKNKNSDNLTKLEEELSKLNAMYNL GNADEGSEMNHSEKKNDRDREASTYEDINDGVATTELYSYNAVSKKALRNIKRTQRKERE VERIEQSRSKIGDLEYEELVECLKRVNKTIYPIAPDGNCLYESILHQLRERVGGFKYNQE DLLNLLGEERFSLEGVNLRDYQKGGPFDFGIFAHFDPQDLSSDVLRFIAAVYILQNEEQF VHFVCADEGDEPAADTYFCYCEAILKGVYGSEIEINALSSILKKKITVYDVNMNISYGEE HETELFICIHHKLYALGKHYNSVVDM

Ubiquitin thiolesterase protein OTUB2 (Otubain-2)

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PVX_092690	83 S	DREASTYED	0.997	unsp	PVX_092690	83 S	DREASTYED	0.997	unsp	PVX_092690	83 S	DREASTYED	0.997	unsp	PVX_092690	104 S	YNAVSKKAL	0.991	unsp	PVX_092690	11 S	EARISYHEY	0.997	unsp	PVX_092690	72 S	EMNHSEKKN	0.994	unsp

PVX_092690

PVX_092690 | hypothetical protein, conserved

ID's

UniProt_ID: A5K575

GEO Functions

Computed_GO_Component_IDs:

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin thiolesterase protein OTUB2 (Otubain-2)

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India