PVX_093510 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:  GO:0020011      

  • Computed_GO_Components:  apicoplast      

  • Computed_GO_Function_IDs:  GO:0003824      

  • Computed_GO_Functions:  catalytic activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_093510OTHER0.9996100.0003400.000051
No Results

  • Fasta :-

    >PVX_093510 MGNTLNRFIFNNPVEGCYEKFRLDFIFVETESGDRIAAHFINRKAPLTILFSHGNGENIY MLYDYFCETSKIWNVNVFLYDYPGYGESTGTPNEKSMYQSGRAVYDYMVNVLNIKPESIV LYGKSIGSCAAIDIAITRKVKGIILQSALMSLLNICFKTRFILPFDSFCNIKKIGMVPCF AFFIHGTDDKIVPFYHGLSLYEKCKLKVHPYWVVGGKHNDIELIENKKFNDSIKSFLKFL RNV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_093510.fa Sequence name : PVX_093510 Sequence length : 243 VALUES OF COMPUTED PARAMETERS Coef20 : 3.318 CoefTot : -0.782 ChDiff : 5 ZoneTo : 14 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 1.541 0.131 0.515 MesoH : 0.042 0.950 -0.136 0.336 MuHd_075 : 26.928 21.102 7.256 6.738 MuHd_095 : 34.693 20.646 10.282 7.124 MuHd_100 : 22.274 11.362 6.373 5.053 MuHd_105 : 7.346 2.565 1.551 3.077 Hmax_075 : 14.817 15.983 2.652 5.845 Hmax_095 : 10.400 10.763 1.985 4.296 Hmax_100 : 10.200 8.700 1.281 4.520 Hmax_105 : 1.000 5.600 -1.063 3.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8507 0.1493 DFMC : 0.8927 0.1073
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 243 PVX_093510 MGNTLNRFIFNNPVEGCYEKFRLDFIFVETESGDRIAAHFINRKAPLTILFSHGNGENIYMLYDYFCETSKIWNVNVFLY 80 DYPGYGESTGTPNEKSMYQSGRAVYDYMVNVLNIKPESIVLYGKSIGSCAAIDIAITRKVKGIILQSALMSLLNICFKTR 160 FILPFDSFCNIKKIGMVPCFAFFIHGTDDKIVPFYHGLSLYEKCKLKVHPYWVVGGKHNDIELIENKKFNDSIKSFLKFL 240 RNV 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_093510 7 MGNTLNR|FI 0.112 . PVX_093510 20 VEGCYEK|FR 0.060 . PVX_093510 22 GCYEKFR|LD 0.099 . PVX_093510 35 ETESGDR|IA 0.069 . PVX_093510 43 AAHFINR|KA 0.083 . PVX_093510 44 AHFINRK|AP 0.080 . PVX_093510 71 YFCETSK|IW 0.058 . PVX_093510 95 TGTPNEK|SM 0.095 . PVX_093510 102 SMYQSGR|AV 0.210 . PVX_093510 115 VNVLNIK|PE 0.064 . PVX_093510 124 SIVLYGK|SI 0.084 . PVX_093510 138 IDIAITR|KV 0.129 . PVX_093510 139 DIAITRK|VK 0.101 . PVX_093510 141 AITRKVK|GI 0.118 . PVX_093510 158 LLNICFK|TR 0.063 . PVX_093510 160 NICFKTR|FI 0.096 . PVX_093510 172 DSFCNIK|KI 0.072 . PVX_093510 173 SFCNIKK|IG 0.080 . PVX_093510 190 IHGTDDK|IV 0.065 . PVX_093510 203 GLSLYEK|CK 0.069 . PVX_093510 205 SLYEKCK|LK 0.060 . PVX_093510 207 YEKCKLK|VH 0.056 . PVX_093510 217 YWVVGGK|HN 0.070 . PVX_093510 227 IELIENK|KF 0.066 . PVX_093510 228 ELIENKK|FN 0.094 . PVX_093510 234 KFNDSIK|SF 0.099 . PVX_093510 238 SIKSFLK|FL 0.075 . PVX_093510 241 SFLKFLR|NV 0.127 . ____________________________^_________________

  • Fasta :-

    >PVX_093510 GTACCAGTGTGGTATTCACTGGATGCACAAAAAAATTCTCGATCCGACGAATATAAATAC ATTAACAGTTCGCACAAAATGGGAATTCCTCATCGTTGCCGAGAAAATGGTACTTCTATT TTTCGTAGCTATTTTAAGATTTAGAATGCCATGCTTTTCCTCAAAGCTGCGCACGAAAGG GTTTCCCCCGACGCAGGTGCAACTCTACGCCAGCTGTTCCTAACTTTTTAAAAATCGAGT GCTTCCTCGTTAGAGCGGTAGGAAGTGCACTTTTTCGGTTACTAAGTTAATGTATATATG TATGCACAAATGTATAGATGCATATATGTATAGATGTATGTACGTATGTATAGATGCACA AACATTTTGACGCTTGGGTGATTCGCAAGTGGAGGTACTCTACCGCATACCTCATACCGC GTTTCTGGGCCACGATTAACGGCGTAGCACCTGTGCAGCGTATGGCAGTGTTGGCTTGGC GCCTAGTGCTCATTATGTAGCATCTAGATGTACGCGCGCGCGAGAGTTGGCACATTCCTG CGTGCATACATATGTGGGTAGGTAGATACATACATGCATAGGTATGCCGCCTTCCCCGCG CATCTATCCCGTTGACCATGAACGGTGCGAAGTAACGATGGGCAGAATGTAAGAGGGACT CGGCTAACAAAAAAAAAAAAACAGCTCTGAAGAGTAGCAACTGTGTACTTGGCACAATTC TGTGCACCAATATTTACGACCCGGAGAGAGAAAAGGAGAGTCTTCCTCCGTTCATTGGCA TTATGGGGAACACCCTGAATCGGTTTATTTTTAATAACCCCGTCGAGGGGTGCTACGAAA AATTCCGCTTGGACTTTATTTTTGTTGAGACGGAGAGCGGGGATAGAATTGCGGCCCACT TCATCAACAGGAAAGCCCCACTAACCATTCTGTTCAGCCATGGCAATGGTGAGAACATCT ACATGTTATATGATTACTTTTGCGAGACGTCCAAAATATGGAATGTGAACGTGTTCTTGT ATGATTACCCCGGATACGGAGAGAGCACCGGAACGCCCAACGAAAAGAGTATGTACCAAA GTGGAAGAGCGGTGTATGACTACATGGTGAACGTCTTAAACATAAAGCCAGAGAGCATTG TGCTGTACGGGAAGTCCATAGGTTCGTGCGCTGCGATCGACATAGCCATCACGAGGAAGG TAAAAGGTATAATTCTGCAGAGCGCCCTAATGTCCCTCCTGAACATTTGCTTTAAAACGC GGTTTATCCTCCCGTTCGATTCTTTCTGCAACATAAAGAAGATCGGCATGGTTCCCTGCT TCGCCTTTTTCATCCATGGCACTGACGACAAGATAGTCCCCTTTTATCACGGACTGAGCC TCTATGAAAAGTGCAAACTGAAGGTGCATCCCTACTGGGTTGTCGGCGGCAAGCACAATG ACATCGAGTTGATTGAGAACAAGAAGTTCAACGATAGCATCAAATCTTTTTTGAAGTTTC TGCGTAATGTGTAGCCGTCCCTGAGCGTGTCCCCTTAGTTTTGCCTCGCCTTTTGCTGCA CTTCATATCTGCTCGAAAGCGCAGCTTCGTCGCGGCGCCCATATAATTCCCACGGACGCG CGATTTAGTCACAACATGGGGGTCCCCTTTCCCATTTATCAACTTTACATGTGCAAGTGT TCATATGAACTGGGGACCCCCCGCGGACGTTCGTTACAAAACCCAACTAGCACACCTGGT GTGCAAATGAAAAATAAAATAAAGGCGCACATCGTTTCGTGTCATGGATGAACATTAAAA TGTAGGTACCCACCTACGTCGTACGATGAAGGTGCGGTTTTCACGTTTGAAATGTATGCC GGAGGGGGAGGGACTCCCACATGGCTGTCCCCCGTTTGCCATCCTCCGTTTGCCGTCCTC CGTTTGCCGCTGCCGCTGCTCGTTCCGCATTTTTTACATTAACAACAAACCTTGGTATGT GGAAGGGCATGTTGCAGGGGAGGTACACAAAAAAAAAAAAAAAAAAAAATTCGACAAGGC AAAAAGGTCACTTTTGCCCTTCCTAAATAACGTGCGCAGAAAAAGTTAAGCGACGTTTTG CTGTGGGATGGTCCTACGCAAGGAGAGAGGAACTGCCGTTGGCCTTTATCGGAAGGCAGT CACAATTCGTCACCTGGTGTTTCAGCTG
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  • Fasta :-

    MGNTLNRFIFNNPVEGCYEKFRLDFIFVETESGDRIAAHFINRKAPLTILFSHGNGENIY MLYDYFCETSKIWNVNVFLYDYPGYGESTGTPNEKSMYQSGRAVYDYMVNVLNIKPESIV LYGKSIGSCAAIDIAITRKVKGIILQSALMSLLNICFKTRFILPFDSFCNIKKIGMVPCF AFFIHGTDDKIVPFYHGLSLYEKCKLKVHPYWVVGGKHNDIELIENKKFNDSIKSFLKFL RNV

    No Results
No Results
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PVX_093510      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India